RNA–Protein interactions for RNA: ENST00000507257.5

NUP54-205, Transcript of nucleoporin 54, humanhuman

TSL 5

Gene NUP54, Length 1,938 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-205ENST00000507257 MEPEQ9NQ76 525 aaPredicted RBP16.33■□□□□ 0.2
NUP54-205ENST00000507257 OR5V1Q9UGF6 321 aa16.33■□□□□ 0.2
NUP54-205ENST00000507257 COPS3Q9UNS2 423 aa16.33■□□□□ 0.2
NUP54-205ENST00000507257 CENPVL1A0A0U1RR11 272 aa16.32■□□□□ 0.2
NUP54-205ENST00000507257 POM121CA8CG34 1229 aa16.32■□□□□ 0.2
NUP54-205ENST00000507257 GPR89AB7ZAQ6 455 aa16.32■□□□□ 0.2
NUP54-205ENST00000507257 PYCARD-AS1I3L0S3 204 aa16.32■□□□□ 0.2
NUP54-205ENST00000507257 PRICKLE3O43900 615 aaPredicted RBP16.32■□□□□ 0.2
NUP54-205ENST00000507257 PRAMEF2O60811 474 aa16.32■□□□□ 0.2
NUP54-205ENST00000507257 CISD3P0C7P0 127 aa16.32■□□□□ 0.2
NUP54-205ENST00000507257 GPR89BP0CG08 455 aa16.32■□□□□ 0.2
NUP54-205ENST00000507257 LAG3P18627 525 aa16.32■□□□□ 0.2
NUP54-205ENST00000507257 METAP1P53582 386 aa16.32■□□□□ 0.2
NUP54-205ENST00000507257 SLC35D3Q5M8T2 416 aa16.32■□□□□ 0.2
NUP54-205ENST00000507257 MFSD9Q8NBP5 474 aa16.32■□□□□ 0.2
NUP54-205ENST00000507257 OR6N1Q8NGY5 312 aa16.32■□□□□ 0.2
NUP54-205ENST00000507257 ATOH1Q92858 354 aaPredicted RBP16.32■□□□□ 0.2
NUP54-205ENST00000507257 OR1F2PQ96R84 312 aa16.32■□□□□ 0.2
NUP54-205ENST00000507257 NCDNQ9UBB6 729 aa16.32■□□□□ 0.2
NUP54-205ENST00000507257 CHRNA9Q9UGM1 479 aa16.32■□□□□ 0.2
NUP54-205ENST00000507257 TRAV27A0A087WT01 109 aa16.31■□□□□ 0.2
NUP54-205ENST00000507257 H7C417 338 aa16.31■□□□□ 0.2
NUP54-205ENST00000507257 GLSO94925 669 aaPredicted RBP16.31■□□□□ 0.2
NUP54-205ENST00000507257 FGF19O95750 216 aa16.31■□□□□ 0.2
NUP54-205ENST00000507257 PTNP21246 168 aa16.31■□□□□ 0.2
NUP54-205ENST00000507257 STX4Q12846 297 aa16.31■□□□□ 0.2
NUP54-205ENST00000507257 EIF2B5Q13144 721 aaKnown RBP16.31■□□□□ 0.2
NUP54-205ENST00000507257 FHL1Q13642 323 aa16.31■□□□□ 0.2
NUP54-205ENST00000507257 LHX8Q68G74 356 aa16.31■□□□□ 0.2
NUP54-205ENST00000507257 PXT1Q8NFP0 134 aa16.31■□□□□ 0.2
NUP54-205ENST00000507257 OR8D1Q8WZ84 308 aa16.31■□□□□ 0.2
NUP54-205ENST00000507257 WDR89Q96FK6 387 aaPredicted RBP16.31■□□□□ 0.2
NUP54-205ENST00000507257 SIPA1Q96FS4 1042 aa16.31■□□□□ 0.2
NUP54-205ENST00000507257 ALX4Q9H161 411 aaPredicted RBP16.31■□□□□ 0.2
NUP54-205ENST00000507257 MTFP1Q9UDX5 166 aa16.31■□□□□ 0.2
NUP54-205ENST00000507257 GYPBP06028 91 aa16.31■□□□□ 0.2
NUP54-205ENST00000507257 MELTFP08582 738 aa16.31■□□□□ 0.2
NUP54-205ENST00000507257 MGMTP16455 207 aa16.31■□□□□ 0.2
NUP54-205ENST00000507257 CDK2P24941 298 aa16.31■□□□□ 0.2
NUP54-205ENST00000507257 DIO1P49895 249 aa16.31■□□□□ 0.2
NUP54-205ENST00000507257 CLDN2P57739 230 aa16.31■□□□□ 0.2
NUP54-205ENST00000507257 FCRLBQ6BAA4 426 aa16.31■□□□□ 0.2
NUP54-205ENST00000507257 LRRN1Q6UXK5 716 aa16.31■□□□□ 0.2
NUP54-205ENST00000507257 TMEM17Q86X19 198 aa16.31■□□□□ 0.2
NUP54-205ENST00000507257 GLB1L2Q8IW92 636 aa16.31■□□□□ 0.2
NUP54-205ENST00000507257 SLC35F3Q8IY50 421 aa16.31■□□□□ 0.2
NUP54-205ENST00000507257 OR5M1Q8NGP8 315 aa16.31■□□□□ 0.2
NUP54-205ENST00000507257 ZMYND19Q96E35 227 aaPredicted RBP16.31■□□□□ 0.2
NUP54-205ENST00000507257 RBM18Q96H35 190 aaKnown RBP16.31■□□□□ 0.2
NUP54-205ENST00000507257 FERD3LQ96RJ6 166 aa16.31■□□□□ 0.2
NUP54-205ENST00000507257 PDCD1LG2Q9BQ51 273 aa16.31■□□□□ 0.2
NUP54-205ENST00000507257 MCCC2Q9HCC0 563 aa16.31■□□□□ 0.2
NUP54-205ENST00000507257 POT1Q9NUX5 634 aa16.31■□□□□ 0.2
NUP54-205ENST00000507257 RASL12Q9NYN1 266 aa16.31■□□□□ 0.2
NUP54-205ENST00000507257 APOBEC3BQ9UH17 382 aaKnown RBP16.31■□□□□ 0.2
NUP54-205ENST00000507257 PURGQ9UJV8 347 aaKnown RBP16.31■□□□□ 0.2
NUP54-205ENST00000507257 GNG8Q9UK08 70 aa16.31■□□□□ 0.2
NUP54-205ENST00000507257 FXYD6-FXYD2A0A087WZ82 144 aa16.3■□□□□ 0.2
NUP54-205ENST00000507257 A0A0B4J2E0 115 aa16.3■□□□□ 0.2
NUP54-205ENST00000507257 A0A1B0GX12 115 aa16.3■□□□□ 0.2
NUP54-205ENST00000507257 RFPL4AA6NLU0 287 aa16.3■□□□□ 0.2
NUP54-205ENST00000507257 RFPL4AL1F8VTS6 287 aa16.3■□□□□ 0.2
NUP54-205ENST00000507257 CDC123O75794 336 aaPredicted RBP16.3■□□□□ 0.2
NUP54-205ENST00000507257 AK1P00568 194 aa16.3■□□□□ 0.2
NUP54-205ENST00000507257 APOC3P02656 99 aa16.3■□□□□ 0.2
NUP54-205ENST00000507257 CSF1P09603 554 aa16.3■□□□□ 0.2
NUP54-205ENST00000507257 GKN3PP0CG01 181 aa16.3■□□□□ 0.2
NUP54-205ENST00000507257 TM4SF4P48230 202 aa16.3■□□□□ 0.2
NUP54-205ENST00000507257 NTHL1P78549 312 aa16.3■□□□□ 0.2
NUP54-205ENST00000507257 CDK3Q00526 305 aa16.3■□□□□ 0.2
NUP54-205ENST00000507257 GPR68Q15743 365 aa16.3■□□□□ 0.2
NUP54-205ENST00000507257 MLF2Q15773 248 aaPredicted RBP16.3■□□□□ 0.2
NUP54-205ENST00000507257 NDUFAF6Q330K2 333 aa16.3■□□□□ 0.2
NUP54-205ENST00000507257 TSSK4Q6SA08 328 aa16.3■□□□□ 0.2
NUP54-205ENST00000507257 ATRAIDQ6UW56 229 aa16.3■□□□□ 0.2
NUP54-205ENST00000507257 OR51A7Q8NH64 312 aa16.3■□□□□ 0.2
NUP54-205ENST00000507257 ARMC5Q96C12 935 aa16.3■□□□□ 0.2
NUP54-205ENST00000507257 GINS4Q9BRT9 223 aa16.3■□□□□ 0.2
NUP54-205ENST00000507257 FXYD6Q9H0Q3 95 aa16.3■□□□□ 0.2
NUP54-205ENST00000507257 C6orf106Q9H6K1 298 aaPredicted RBP16.3■□□□□ 0.2
NUP54-205ENST00000507257 TMEM27Q9HBJ8 222 aa16.3■□□□□ 0.2
NUP54-205ENST00000507257 DUSP22Q9NRW4 184 aa16.3■□□□□ 0.2
NUP54-205ENST00000507257 RNF186Q9NXI6 227 aa16.3■□□□□ 0.2
NUP54-205ENST00000507257 GXYLT2A0PJZ3 443 aa16.29■□□□□ 0.2
NUP54-205ENST00000507257 SIGLEC6O43699 453 aa16.29■□□□□ 0.2
NUP54-205ENST00000507257 IFI6P09912 130 aa16.29■□□□□ 0.2
NUP54-205ENST00000507257 ZNF35P13682 527 aa16.29■□□□□ 0.2
NUP54-205ENST00000507257 CFPP27918 469 aa16.29■□□□□ 0.2
NUP54-205ENST00000507257 HOXA1P49639 335 aaPredicted RBP16.29■□□□□ 0.2
NUP54-205ENST00000507257 TNFRSF17Q02223 184 aa16.29■□□□□ 0.2
NUP54-205ENST00000507257 FGL1Q08830 312 aa16.29■□□□□ 0.2
NUP54-205ENST00000507257 PDSS1Q5T2R2 415 aa16.29■□□□□ 0.2
NUP54-205ENST00000507257 SLC6A19Q695T7 634 aa16.29■□□□□ 0.2
NUP54-205ENST00000507257 OR7E24Q6IFN5 339 aa16.29■□□□□ 0.2
NUP54-205ENST00000507257 ZCCHC12Q6PEW1 402 aa16.29■□□□□ 0.2
NUP54-205ENST00000507257 MOB3CQ70IA8 216 aa16.29■□□□□ 0.2
NUP54-205ENST00000507257 KRT77Q7Z794 578 aa16.29■□□□□ 0.2
NUP54-205ENST00000507257 DND1Q8IYX4 353 aaKnown RBP16.29■□□□□ 0.2
NUP54-205ENST00000507257 GAL3ST3Q96A11 431 aa16.29■□□□□ 0.2
NUP54-205ENST00000507257 SCLYQ96I15 445 aa16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms