RNA–Protein interactions for RNA: ENST00000482310.5

HDAC1-208, Transcript of histone deacetylase 1, humanhuman

TSL 5

Gene HDAC1, Length 779 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-208ENST00000482310 CLEC4AQ9UMR7 237 aa11.85□□□□□ -0.51
HDAC1-208ENST00000482310 HDGFL3Q9Y3E1 203 aa11.85□□□□□ -0.51
HDAC1-208ENST00000482310 FAM215AQ9Y5M1 114 aa11.85□□□□□ -0.51
HDAC1-208ENST00000482310 LYVE1Q9Y5Y7 322 aa11.85□□□□□ -0.51
HDAC1-208ENST00000482310 UBR5O95071 2799 aaPredicted RBP11.85□□□□□ -0.51
HDAC1-208ENST00000482310 FREM1Q5H8C1 2179 aa11.84□□□□□ -0.51
HDAC1-208ENST00000482310 A0A1W2PRQ8 180 aa11.84□□□□□ -0.51
HDAC1-208ENST00000482310 LIPT2A6NK58 231 aa11.84□□□□□ -0.51
HDAC1-208ENST00000482310 AHRRA9YTQ3 701 aa11.84□□□□□ -0.51
HDAC1-208ENST00000482310 ZNF814B7Z6K7 855 aa11.84□□□□□ -0.51
HDAC1-208ENST00000482310 M0R082 166 aa11.84□□□□□ -0.51
HDAC1-208ENST00000482310 OR10H3O60404 316 aa11.84□□□□□ -0.51
HDAC1-208ENST00000482310 RAMP1O60894 148 aa11.84□□□□□ -0.51
HDAC1-208ENST00000482310 NPIPB7O75200 414 aa11.84□□□□□ -0.51
HDAC1-208ENST00000482310 SERPINI2O75830 405 aa11.84□□□□□ -0.51
HDAC1-208ENST00000482310 AQP8O94778 261 aa11.84□□□□□ -0.51
HDAC1-208ENST00000482310 PMS2P2O95744 297 aa11.84□□□□□ -0.51
HDAC1-208ENST00000482310 BGLAPP02818 100 aa11.84□□□□□ -0.51
HDAC1-208ENST00000482310 SAGP10523 405 aaPredicted RBP11.84□□□□□ -0.51
HDAC1-208ENST00000482310 GABRA1P14867 456 aa11.84□□□□□ -0.51
HDAC1-208ENST00000482310 ENPP1P22413 925 aa11.84□□□□□ -0.51
HDAC1-208ENST00000482310 GRPRP30550 384 aa11.84□□□□□ -0.51
HDAC1-208ENST00000482310 RBM34P42696 430 aaKnown RBP11.84□□□□□ -0.51
HDAC1-208ENST00000482310 CA7P43166 264 aa11.84□□□□□ -0.51
HDAC1-208ENST00000482310 SMIM11AP58511 58 aa11.84□□□□□ -0.51
HDAC1-208ENST00000482310 SLC35A1P78382 337 aa11.84□□□□□ -0.51
HDAC1-208ENST00000482310 LTBQ06643 244 aa11.84□□□□□ -0.51
HDAC1-208ENST00000482310 SRSF1Q07955 248 aaKnown RBP eCLIP11.84□□□□□ -0.512e-6■■■□□ 16.4
HDAC1-208ENST00000482310 DGCR6Q14129 220 aa11.84□□□□□ -0.51
HDAC1-208ENST00000482310 ZNF239Q16600 458 aaKnown RBP11.84□□□□□ -0.51
HDAC1-208ENST00000482310 B3GNT6Q6ZMB0 384 aa11.84□□□□□ -0.51
HDAC1-208ENST00000482310 CCDC103Q8IW40 242 aa11.84□□□□□ -0.51
HDAC1-208ENST00000482310 HS3ST5Q8IZT8 346 aa11.84□□□□□ -0.51
HDAC1-208ENST00000482310 GCNT2Q8N0V5 402 aa11.84□□□□□ -0.51
HDAC1-208ENST00000482310 LRRC17Q8N6Y2 441 aa11.84□□□□□ -0.51
HDAC1-208ENST00000482310 C9orf106Q8NAJ2 232 aa11.84□□□□□ -0.51
HDAC1-208ENST00000482310 OR9Q2Q8NGE9 314 aa11.84□□□□□ -0.51
HDAC1-208ENST00000482310 ZNF417Q8TAU3 575 aa11.84□□□□□ -0.51
HDAC1-208ENST00000482310 ZPLD1Q8TCW7 415 aa11.84□□□□□ -0.51
HDAC1-208ENST00000482310 CPNE4Q96A23 557 aaPredicted RBP11.84□□□□□ -0.51
HDAC1-208ENST00000482310 ZHX1-C8orf76Q96EF9 292 aa11.84□□□□□ -0.51
HDAC1-208ENST00000482310 SGTBQ96EQ0 304 aa11.84□□□□□ -0.51
HDAC1-208ENST00000482310 HS6ST2Q96MM7 605 aa11.84□□□□□ -0.51
HDAC1-208ENST00000482310 ZNF587Q96SQ5 575 aaPredicted RBP11.84□□□□□ -0.51
HDAC1-208ENST00000482310 ZNF426Q9BUY5 554 aa11.84□□□□□ -0.51
HDAC1-208ENST00000482310 POTEKPQ9BYX7 375 aa11.84□□□□□ -0.51
HDAC1-208ENST00000482310 CLCF1Q9UBD9 225 aa11.84□□□□□ -0.51
HDAC1-208ENST00000482310 PTPN13Q12923 2485 aa11.84□□□□□ -0.51
HDAC1-208ENST00000482310 NCOA6Q14686 2063 aaPredicted RBP11.83□□□□□ -0.51
HDAC1-208ENST00000482310 RELNP78509 3460 aa11.83□□□□□ -0.52
HDAC1-208ENST00000482310 POLEQ07864 2286 aa11.83□□□□□ -0.52
HDAC1-208ENST00000482310 SH3PXD2BA1X283 911 aa11.83□□□□□ -0.52
HDAC1-208ENST00000482310 C11orf98E9PRG8 122 aa11.83□□□□□ -0.52
HDAC1-208ENST00000482310 H3BNX3 289 aa11.83□□□□□ -0.52
HDAC1-208ENST00000482310 SMAD9O15198 467 aaKnown RBP11.83□□□□□ -0.52
HDAC1-208ENST00000482310 CLOCKO15516 846 aa11.83□□□□□ -0.52
HDAC1-208ENST00000482310 LRRTM2O43300 516 aa11.83□□□□□ -0.52
HDAC1-208ENST00000482310 BAG2O95816 211 aa11.83□□□□□ -0.52
HDAC1-208ENST00000482310 MAKP20794 623 aa11.83□□□□□ -0.52
HDAC1-208ENST00000482310 CLK1P49759 484 aaKnown RBP11.83□□□□□ -0.52
HDAC1-208ENST00000482310 MAP2K6P52564 334 aa11.83□□□□□ -0.52
HDAC1-208ENST00000482310 PER3P56645 1201 aa11.83□□□□□ -0.52
HDAC1-208ENST00000482310 RAC3P60763 192 aa11.83□□□□□ -0.52
HDAC1-208ENST00000482310 SIRPAP78324 504 aa11.83□□□□□ -0.52
HDAC1-208ENST00000482310 PMPCAQ10713 525 aa11.83□□□□□ -0.52
HDAC1-208ENST00000482310 OTUD3Q5T2D3 398 aaPredicted RBP11.83□□□□□ -0.52
HDAC1-208ENST00000482310 FAM69AQ5T7M9 428 aa11.83□□□□□ -0.52
HDAC1-208ENST00000482310 HMBOX1Q6NT76 420 aa11.83□□□□□ -0.52
HDAC1-208ENST00000482310 MBOAT2Q6ZWT7 520 aa11.83□□□□□ -0.52
HDAC1-208ENST00000482310 FCRLAQ7L513 359 aa11.83□□□□□ -0.52
HDAC1-208ENST00000482310 TMEM179BQ7Z7N9 219 aa11.83□□□□□ -0.52
HDAC1-208ENST00000482310 GPAT4Q86UL3 456 aa11.83□□□□□ -0.52
HDAC1-208ENST00000482310 KDM8Q8N371 416 aa11.83□□□□□ -0.52
HDAC1-208ENST00000482310 MARVELD2Q8N4S9 558 aa11.83□□□□□ -0.52
HDAC1-208ENST00000482310 TMEM99Q8N816 258 aa11.83□□□□□ -0.52
HDAC1-208ENST00000482310 PAPD5Q8NDF8 572 aaKnown RBP11.83□□□□□ -0.52
HDAC1-208ENST00000482310 ICA1LQ8NDH6 482 aa11.83□□□□□ -0.52
HDAC1-208ENST00000482310 OR4K5Q8NGD3 323 aa11.83□□□□□ -0.52
HDAC1-208ENST00000482310 PIGXQ8TBF5 258 aa11.83□□□□□ -0.52
HDAC1-208ENST00000482310 ABHD3Q8WU67 409 aa11.83□□□□□ -0.52
HDAC1-208ENST00000482310 ZNF775Q96BV0 537 aaPredicted RBP11.83□□□□□ -0.52
HDAC1-208ENST00000482310 BPIFA2Q96DR5 249 aa11.83□□□□□ -0.52
HDAC1-208ENST00000482310 DHRS1Q96LJ7 313 aa11.83□□□□□ -0.52
HDAC1-208ENST00000482310 ASPNQ9BXN1 380 aa11.83□□□□□ -0.52
HDAC1-208ENST00000482310 KLHL4Q9C0H6 718 aa11.83□□□□□ -0.52
HDAC1-208ENST00000482310 S100A14Q9HCY8 104 aa11.83□□□□□ -0.52
HDAC1-208ENST00000482310 NANSQ9NR45 359 aa11.83□□□□□ -0.52
HDAC1-208ENST00000482310 DNAJB9Q9UBS3 223 aa11.83□□□□□ -0.52
HDAC1-208ENST00000482310 TRAV27A0A087WT01 109 aa11.82□□□□□ -0.52
HDAC1-208ENST00000482310 SAC3D1A6NKF1 404 aa11.82□□□□□ -0.52
HDAC1-208ENST00000482310 FTCDNL1E5RQL4 147 aa11.82□□□□□ -0.52
HDAC1-208ENST00000482310 H0YHG0 523 aa11.82□□□□□ -0.52
HDAC1-208ENST00000482310 HNRNPRO43390 633 aaKnown RBP11.82□□□□□ -0.52
HDAC1-208ENST00000482310 DEAF1O75398 565 aaPredicted RBP11.82□□□□□ -0.52
HDAC1-208ENST00000482310 OR7A10O76100 309 aa11.82□□□□□ -0.52
HDAC1-208ENST00000482310 CCNB2O95067 398 aa11.82□□□□□ -0.52
HDAC1-208ENST00000482310 PLGP00747 810 aaPredicted RBP11.82□□□□□ -0.52
HDAC1-208ENST00000482310 LDLRP01130 860 aa11.82□□□□□ -0.52
HDAC1-208ENST00000482310 STSP08842 583 aa11.82□□□□□ -0.52
HDAC1-208ENST00000482310 GLI4P10075 376 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 90 ms