RNA–Protein interactions for RNA: ENST00000471968.1

HDAC3-206, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 529 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-206ENST00000471968 CHIT1Q13231 466 aa5.36□□□□□ -1.55
HDAC3-206ENST00000471968 IQCB1Q15051 598 aa5.36□□□□□ -1.55
HDAC3-206ENST00000471968 TRADDQ15628 312 aa5.36□□□□□ -1.55
HDAC3-206ENST00000471968 TOMM34Q15785 309 aaPredicted RBP5.36□□□□□ -1.55
HDAC3-206ENST00000471968 ATP6AP1LQ52LC2 224 aa5.36□□□□□ -1.55
HDAC3-206ENST00000471968 FBXO48Q5FWF7 155 aa5.36□□□□□ -1.55
HDAC3-206ENST00000471968 KHDC1LQ5JSQ8 128 aa5.36□□□□□ -1.55
HDAC3-206ENST00000471968 FAM209AQ5JX71 171 aa5.36□□□□□ -1.55
HDAC3-206ENST00000471968 COX20Q5RI15 118 aa5.36□□□□□ -1.55
HDAC3-206ENST00000471968 RGS7BPQ6MZT1 257 aaPredicted RBP5.36□□□□□ -1.55
HDAC3-206ENST00000471968 NUDT13Q86X67 352 aa5.36□□□□□ -1.55
HDAC3-206ENST00000471968 ZNF575Q86XF7 245 aa5.36□□□□□ -1.55
HDAC3-206ENST00000471968 KLBQ86Z14 1044 aa5.36□□□□□ -1.55
HDAC3-206ENST00000471968 CMIPQ8IY22 773 aa5.36□□□□□ -1.55
HDAC3-206ENST00000471968 CPEB3Q8NE35 698 aaKnown RBP5.36□□□□□ -1.55
HDAC3-206ENST00000471968 MGARPQ8TDB4 240 aa5.36□□□□□ -1.55
HDAC3-206ENST00000471968 GEMIN6Q8WXD5 167 aaKnown RBP5.36□□□□□ -1.55
HDAC3-206ENST00000471968 KLHL29Q96CT2 875 aa5.36□□□□□ -1.55
HDAC3-206ENST00000471968 ZHX1-C8orf76Q96EF9 292 aa5.36□□□□□ -1.55
HDAC3-206ENST00000471968 AJUBAQ96IF1 538 aa5.36□□□□□ -1.55
HDAC3-206ENST00000471968 PLEKHA8Q96JA3 519 aa5.36□□□□□ -1.55
HDAC3-206ENST00000471968 MAELQ96JY0 434 aaKnown RBP5.36□□□□□ -1.55
HDAC3-206ENST00000471968 ST6GALNAC5Q9BVH7 336 aa5.36□□□□□ -1.55
HDAC3-206ENST00000471968 CDADC1Q9BWV3 514 aa5.36□□□□□ -1.55
HDAC3-206ENST00000471968 IL22Q9GZX6 179 aa5.36□□□□□ -1.55
HDAC3-206ENST00000471968 ZNF702PQ9H963 129 aa5.36□□□□□ -1.55
HDAC3-206ENST00000471968 HHATLQ9HCP6 504 aa5.36□□□□□ -1.55
HDAC3-206ENST00000471968 SCRT2Q9NQ03 307 aa5.36□□□□□ -1.55
HDAC3-206ENST00000471968 SLCO1C1Q9NYB5 712 aa5.36□□□□□ -1.55
HDAC3-206ENST00000471968 TAS2R13Q9NYV9 303 aa5.36□□□□□ -1.55
HDAC3-206ENST00000471968 TAS2R9Q9NYW1 312 aa5.36□□□□□ -1.55
HDAC3-206ENST00000471968 MRTO4Q9UKD2 239 aaKnown RBP5.36□□□□□ -1.55
HDAC3-206ENST00000471968 ZNF256Q9Y2P7 627 aaPredicted RBP5.36□□□□□ -1.55
HDAC3-206ENST00000471968 CAB39Q9Y376 341 aaPredicted RBP5.36□□□□□ -1.55
HDAC3-206ENST00000471968 MAB21L2Q9Y586 359 aa5.36□□□□□ -1.55
HDAC3-206ENST00000471968 TSSC4Q9Y5U2 329 aaPredicted RBP5.36□□□□□ -1.55
HDAC3-206ENST00000471968 NCF1BA6NI72 391 aaPredicted RBP5.35□□□□□ -1.55
HDAC3-206ENST00000471968 NCF1CA8MVU1 366 aaPredicted RBP5.35□□□□□ -1.55
HDAC3-206ENST00000471968 ZNF879B4DU55 563 aa5.35□□□□□ -1.55
HDAC3-206ENST00000471968 LDLRAD4O15165 306 aa5.35□□□□□ -1.55
HDAC3-206ENST00000471968 TM9SF1O15321 606 aa5.35□□□□□ -1.55
HDAC3-206ENST00000471968 TP73O15350 636 aa5.35□□□□□ -1.55
HDAC3-206ENST00000471968 PSTPIP1O43586 416 aa5.35□□□□□ -1.55
HDAC3-206ENST00000471968 ENSAO43768 121 aaKnown RBP5.35□□□□□ -1.55
HDAC3-206ENST00000471968 HAUS5O94927 633 aa5.35□□□□□ -1.55
HDAC3-206ENST00000471968 OXSR1O95747 527 aaPredicted RBP5.35□□□□□ -1.55
HDAC3-206ENST00000471968 IGF2P01344 180 aa5.35□□□□□ -1.55
HDAC3-206ENST00000471968 IGKV1D-16P01601 117 aa5.35□□□□□ -1.55
HDAC3-206ENST00000471968 IGHV1-46P01743 117 aa5.35□□□□□ -1.55
HDAC3-206ENST00000471968 NCF1P14598 390 aaPredicted RBP5.35□□□□□ -1.55
HDAC3-206ENST00000471968 HOXB1P14653 301 aaPredicted RBP5.35□□□□□ -1.55
HDAC3-206ENST00000471968 PRKCAP17252 672 aa5.35□□□□□ -1.55
HDAC3-206ENST00000471968 COMTP21964 271 aa5.35□□□□□ -1.55
HDAC3-206ENST00000471968 SLC1A2P43004 574 aa5.35□□□□□ -1.55
HDAC3-206ENST00000471968 MARCKSL1P49006 195 aa5.35□□□□□ -1.55
HDAC3-206ENST00000471968 CDKN2DP55273 166 aa5.35□□□□□ -1.55
HDAC3-206ENST00000471968 CD226Q15762 336 aa5.35□□□□□ -1.55
HDAC3-206ENST00000471968 NPTX1Q15818 432 aa5.35□□□□□ -1.55
HDAC3-206ENST00000471968 CCNG2Q16589 344 aa5.35□□□□□ -1.55
HDAC3-206ENST00000471968 SPRNQ5BIV9 151 aa5.35□□□□□ -1.55
HDAC3-206ENST00000471968 SLC48A1Q6P1K1 146 aa5.35□□□□□ -1.55
HDAC3-206ENST00000471968 C3orf33Q6P1S2 294 aa5.35□□□□□ -1.55
HDAC3-206ENST00000471968 MED27Q6P2C8 311 aa5.35□□□□□ -1.55
HDAC3-206ENST00000471968 ETV3LQ6ZN32 361 aa5.35□□□□□ -1.55
HDAC3-206ENST00000471968 LINC00336Q6ZUF6 198 aa5.35□□□□□ -1.55
HDAC3-206ENST00000471968 DDIASQ8IXT1 998 aa5.35□□□□□ -1.55
HDAC3-206ENST00000471968 DTX3Q8N9I9 347 aa5.35□□□□□ -1.55
HDAC3-206ENST00000471968 OR7G3Q8NG95 312 aa5.35□□□□□ -1.55
HDAC3-206ENST00000471968 OR5AU1Q8NGC0 362 aa5.35□□□□□ -1.55
HDAC3-206ENST00000471968 OR9A2Q8NGT5 310 aa5.35□□□□□ -1.55
HDAC3-206ENST00000471968 OR4C3Q8NH37 302 aa5.35□□□□□ -1.55
HDAC3-206ENST00000471968 HUS1BQ8NHY5 278 aa5.35□□□□□ -1.55
HDAC3-206ENST00000471968 SLC35G2Q8TBE7 412 aa5.35□□□□□ -1.55
HDAC3-206ENST00000471968 SYNPRQ8TBG9 265 aa5.35□□□□□ -1.55
HDAC3-206ENST00000471968 UBE2E3Q969T4 207 aa5.35□□□□□ -1.55
HDAC3-206ENST00000471968 COQ8BQ96D53 544 aa5.35□□□□□ -1.55
HDAC3-206ENST00000471968 WDFY2Q96P53 400 aa5.35□□□□□ -1.55
HDAC3-206ENST00000471968 ZNF347Q96SE7 839 aa5.35□□□□□ -1.55
HDAC3-206ENST00000471968 MTERF1Q99551 399 aaKnown RBP5.35□□□□□ -1.55
HDAC3-206ENST00000471968 TMEM79Q9BSE2 394 aa5.35□□□□□ -1.55
HDAC3-206ENST00000471968 KIFC1Q9BW19 673 aa5.35□□□□□ -1.55
HDAC3-206ENST00000471968 WNT10AQ9GZT5 417 aa5.35□□□□□ -1.55
HDAC3-206ENST00000471968 EGLN1Q9GZT9 426 aa5.35□□□□□ -1.55
HDAC3-206ENST00000471968 MUC13Q9H3R2 512 aa5.35□□□□□ -1.55
HDAC3-206ENST00000471968 Q9N2J8 555 aa5.35□□□□□ -1.55
HDAC3-206ENST00000471968 PFDN4Q9NQP4 134 aa5.35□□□□□ -1.55
HDAC3-206ENST00000471968 TMEM106BQ9NUM4 274 aa5.35□□□□□ -1.55
HDAC3-206ENST00000471968 SELENONQ9NZV5 590 aa5.35□□□□□ -1.55
HDAC3-206ENST00000471968 CHMP5Q9NZZ3 219 aa5.35□□□□□ -1.55
HDAC3-206ENST00000471968 CTNNAL1Q9UBT7 734 aa5.35□□□□□ -1.55
HDAC3-206ENST00000471968 CES1P1Q9UKY3 287 aa5.35□□□□□ -1.55
HDAC3-206ENST00000471968 ZDHHC9Q9Y397 364 aa5.35□□□□□ -1.55
HDAC3-206ENST00000471968 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP5.35□□□□□ -1.55
HDAC3-206ENST00000471968 IGLV3-9A0A075B6K5 115 aa5.34□□□□□ -1.55
HDAC3-206ENST00000471968 SLC22A23A1A5C7 686 aa5.34□□□□□ -1.55
HDAC3-206ENST00000471968 NPEPPSL1A6NEC2 478 aa5.34□□□□□ -1.55
HDAC3-206ENST00000471968 C22orf46C9J442 243 aa5.34□□□□□ -1.55
HDAC3-206ENST00000471968 DNAJA2O60884 412 aa5.34□□□□□ -1.55
HDAC3-206ENST00000471968 ZNF189O75820 626 aaPredicted RBP5.34□□□□□ -1.55
HDAC3-206ENST00000471968 RSL1D1O76021 490 aaKnown RBP5.34□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms