RNA–Protein interactions for RNA: ENST00000437813.7

TNFRSF1A-203, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 5

Gene TNFRSF1A, Length 634 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-203ENST00000437813 MRPL19P49406 292 aaKnown RBP12.6□□□□□ -0.39
TNFRSF1A-203ENST00000437813 CEACAM7Q14002 265 aa12.6□□□□□ -0.39
TNFRSF1A-203ENST00000437813 MST1LQ2TV78 715 aa12.6□□□□□ -0.39
TNFRSF1A-203ENST00000437813 OTUD3Q5T2D3 398 aaPredicted RBP12.6□□□□□ -0.39
TNFRSF1A-203ENST00000437813 HHATQ5VTY9 493 aa12.6□□□□□ -0.39
TNFRSF1A-203ENST00000437813 ZNF544Q6NX49 715 aa12.6□□□□□ -0.39
TNFRSF1A-203ENST00000437813 SLC22A25Q6T423 547 aa12.6□□□□□ -0.39
TNFRSF1A-203ENST00000437813 KLHL17Q6TDP4 642 aa12.6□□□□□ -0.39
TNFRSF1A-203ENST00000437813 LINGO2Q7L985 606 aa12.6□□□□□ -0.39
TNFRSF1A-203ENST00000437813 CXXC5Q7LFL8 322 aaKnown RBP12.6□□□□□ -0.39
TNFRSF1A-203ENST00000437813 CROCCP2Q86T23 111 aa12.6□□□□□ -0.39
TNFRSF1A-203ENST00000437813 HIPK1Q86Z02 1210 aa12.6□□□□□ -0.39
TNFRSF1A-203ENST00000437813 PEX5LQ8IYB4 626 aa12.6□□□□□ -0.39
TNFRSF1A-203ENST00000437813 MUC15Q8N387 334 aa12.6□□□□□ -0.39
TNFRSF1A-203ENST00000437813 ANKRD42Q8N9B4 389 aa12.6□□□□□ -0.39
TNFRSF1A-203ENST00000437813 OR9I1Q8NGQ6 314 aa12.6□□□□□ -0.39
TNFRSF1A-203ENST00000437813 OR52P1PQ8NH57 321 aa12.6□□□□□ -0.39
TNFRSF1A-203ENST00000437813 C3orf49Q96BT1 292 aa12.6□□□□□ -0.39
TNFRSF1A-203ENST00000437813 HS6ST2Q96MM7 605 aa12.6□□□□□ -0.39
TNFRSF1A-203ENST00000437813 OR52B2Q96RD2 323 aa12.6□□□□□ -0.39
TNFRSF1A-203ENST00000437813 NAA11Q9BSU3 229 aaPredicted RBP12.6□□□□□ -0.39
TNFRSF1A-203ENST00000437813 CENPHQ9H3R5 247 aa12.6□□□□□ -0.39
TNFRSF1A-203ENST00000437813 ALG2Q9H553 416 aa12.6□□□□□ -0.39
TNFRSF1A-203ENST00000437813 TPT1P8Q9HAU6 139 aa12.6□□□□□ -0.39
TNFRSF1A-203ENST00000437813 ZIM2Q9NZV7 527 aa12.6□□□□□ -0.39
TNFRSF1A-203ENST00000437813 P2RX2Q9UBL9 471 aa12.6□□□□□ -0.39
TNFRSF1A-203ENST00000437813 ZNF443Q9Y2A4 671 aaPredicted RBP12.6□□□□□ -0.39
TNFRSF1A-203ENST00000437813 AMDHD2Q9Y303 409 aa12.6□□□□□ -0.39
TNFRSF1A-203ENST00000437813 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP12.6□□□□□ -0.399e-7■■■□□ 18.2
TNFRSF1A-203ENST00000437813 SLCO1B7G3V0H7 640 aa12.59□□□□□ -0.39
TNFRSF1A-203ENST00000437813 M0R1B8 84 aa12.59□□□□□ -0.39
TNFRSF1A-203ENST00000437813 SSX4O60224 188 aa12.59□□□□□ -0.39
TNFRSF1A-203ENST00000437813 BCHEP06276 602 aa12.59□□□□□ -0.39
TNFRSF1A-203ENST00000437813 GPIP06744 558 aa12.59□□□□□ -0.39
TNFRSF1A-203ENST00000437813 EGR4Q05215 589 aa12.59□□□□□ -0.39
TNFRSF1A-203ENST00000437813 BNIP2Q12982 314 aa12.59□□□□□ -0.39
TNFRSF1A-203ENST00000437813 GNA13Q14344 377 aa12.59□□□□□ -0.39
TNFRSF1A-203ENST00000437813 SWI5Q1ZZU3 235 aa12.59□□□□□ -0.39
TNFRSF1A-203ENST00000437813 LIN52Q52LA3 116 aa12.59□□□□□ -0.39
TNFRSF1A-203ENST00000437813 RPS26P11Q5JNZ5 115 aaPredicted RBP12.59□□□□□ -0.39
TNFRSF1A-203ENST00000437813 C9orf135Q5VTT2 229 aa12.59□□□□□ -0.39
TNFRSF1A-203ENST00000437813 WBP2NLQ6ICG8 309 aa12.59□□□□□ -0.39
TNFRSF1A-203ENST00000437813 NANOS1Q8WY41 292 aaKnown RBP12.59□□□□□ -0.39
TNFRSF1A-203ENST00000437813 GTF2H4Q92759 462 aa12.59□□□□□ -0.39
TNFRSF1A-203ENST00000437813 PAIP2Q9BPZ3 127 aaKnown RBP12.59□□□□□ -0.39
TNFRSF1A-203ENST00000437813 PTDSS2Q9BVG9 487 aa12.59□□□□□ -0.39
TNFRSF1A-203ENST00000437813 C1QTNF6Q9BXI9 259 aa12.59□□□□□ -0.39
TNFRSF1A-203ENST00000437813 PAIP1Q9H074 479 aaKnown RBP12.59□□□□□ -0.39
TNFRSF1A-203ENST00000437813 NELFAQ9H3P2 528 aa12.59□□□□□ -0.39
TNFRSF1A-203ENST00000437813 SLC52A3Q9NQ40 469 aa12.59□□□□□ -0.39
TNFRSF1A-203ENST00000437813 CALML5Q9NZT1 146 aa12.59□□□□□ -0.39
TNFRSF1A-203ENST00000437813 A8MVM7 634 aa12.58□□□□□ -0.4
TNFRSF1A-203ENST00000437813 KLF11O14901 512 aa12.58□□□□□ -0.4
TNFRSF1A-203ENST00000437813 NUDT7P0C024 238 aa12.58□□□□□ -0.4
TNFRSF1A-203ENST00000437813 KITP10721 976 aa12.58□□□□□ -0.4
TNFRSF1A-203ENST00000437813 CRISP3P54108 245 aa12.58□□□□□ -0.4
TNFRSF1A-203ENST00000437813 DSTNP60981 165 aa12.58□□□□□ -0.4
TNFRSF1A-203ENST00000437813 LGALS3BPQ08380 585 aa12.58□□□□□ -0.4
TNFRSF1A-203ENST00000437813 LOXL1Q08397 574 aaPredicted RBP12.58□□□□□ -0.4
TNFRSF1A-203ENST00000437813 OR7A5Q15622 319 aa12.58□□□□□ -0.4
TNFRSF1A-203ENST00000437813 C6orf89Q6UWU4 347 aa12.58□□□□□ -0.4
TNFRSF1A-203ENST00000437813 CREB3L2Q70SY1 520 aa12.58□□□□□ -0.4
TNFRSF1A-203ENST00000437813 SERPINA11Q86U17 422 aa12.58□□□□□ -0.4
TNFRSF1A-203ENST00000437813 COMTD1Q86VU5 262 aa12.58□□□□□ -0.4
TNFRSF1A-203ENST00000437813 EPHX4Q8IUS5 362 aa12.58□□□□□ -0.4
TNFRSF1A-203ENST00000437813 POMGNT2Q8NAT1 580 aa12.58□□□□□ -0.4
TNFRSF1A-203ENST00000437813 SPATA3Q8NHX4 192 aa12.58□□□□□ -0.4
TNFRSF1A-203ENST00000437813 HTRA1Q92743 480 aa12.58□□□□□ -0.4
TNFRSF1A-203ENST00000437813 SLC35B4Q969S0 331 aa12.58□□□□□ -0.4
TNFRSF1A-203ENST00000437813 TMEM19Q96HH6 336 aa12.58□□□□□ -0.4
TNFRSF1A-203ENST00000437813 ADAD1Q96M93 576 aaKnown RBP12.58□□□□□ -0.4
TNFRSF1A-203ENST00000437813 ZBTB18Q99592 522 aa12.58□□□□□ -0.4
TNFRSF1A-203ENST00000437813 SPATA9Q9BWV2 254 aa12.58□□□□□ -0.4
TNFRSF1A-203ENST00000437813 BCL2L10Q9HD36 194 aa12.58□□□□□ -0.4
TNFRSF1A-203ENST00000437813 GMEB1Q9Y692 573 aa12.58□□□□□ -0.4
TNFRSF1A-203ENST00000437813 A0A0G2JPF8 293 aa12.57□□□□□ -0.4
TNFRSF1A-203ENST00000437813 HNRNPCL2B2RXH8 293 aa12.57□□□□□ -0.4
TNFRSF1A-203ENST00000437813 HNRNPCL3B7ZW38 293 aa12.57□□□□□ -0.4
TNFRSF1A-203ENST00000437813 ATP6V1G2-DDX39BF2Z307 99 aa12.57□□□□□ -0.4
TNFRSF1A-203ENST00000437813 HNRNPCL1O60812 293 aaKnown RBP12.57□□□□□ -0.4
TNFRSF1A-203ENST00000437813 ZNF432O94892 652 aa12.57□□□□□ -0.4
TNFRSF1A-203ENST00000437813 HNRNPCL4P0DMR1 293 aa12.57□□□□□ -0.4
TNFRSF1A-203ENST00000437813 UQCRBP14927 111 aa12.57□□□□□ -0.4
TNFRSF1A-203ENST00000437813 CXCR1P25024 350 aa12.57□□□□□ -0.4
TNFRSF1A-203ENST00000437813 CRATP43155 626 aa12.57□□□□□ -0.4
TNFRSF1A-203ENST00000437813 NUDT6P53370 316 aa12.57□□□□□ -0.4
TNFRSF1A-203ENST00000437813 DSCR9P59020 149 aa12.57□□□□□ -0.4
TNFRSF1A-203ENST00000437813 VLDLRP98155 873 aa12.57□□□□□ -0.4
TNFRSF1A-203ENST00000437813 TGFBR3Q03167 851 aa12.57□□□□□ -0.4
TNFRSF1A-203ENST00000437813 RGNQ15493 299 aa12.57□□□□□ -0.4
TNFRSF1A-203ENST00000437813 ZSWIM7Q19AV6 140 aa12.57□□□□□ -0.4
TNFRSF1A-203ENST00000437813 TMEM249Q2WGJ8 235 aa12.57□□□□□ -0.4
TNFRSF1A-203ENST00000437813 HIKESHIQ53FT3 197 aa12.57□□□□□ -0.4
TNFRSF1A-203ENST00000437813 C1orf140Q5VVS0 124 aa12.57□□□□□ -0.4
TNFRSF1A-203ENST00000437813 PRAMEF8Q5VWM4 474 aa12.57□□□□□ -0.4
TNFRSF1A-203ENST00000437813 PRAMEF7Q5VXH5 474 aa12.57□□□□□ -0.4
TNFRSF1A-203ENST00000437813 AAED1Q7RTV5 226 aa12.57□□□□□ -0.4
TNFRSF1A-203ENST00000437813 MSRB3Q8IXL7 192 aa12.57□□□□□ -0.4
TNFRSF1A-203ENST00000437813 FBXL14Q8N1E6 418 aa12.57□□□□□ -0.4
TNFRSF1A-203ENST00000437813 C10orf111Q8N326 155 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 77.1 ms