RNA–Protein interactions for RNA: ENST00000417997.1

HMGB3P20-201, Transcript of high mobility group box 3 pseudogene 20, humanhuman

BASIC

Gene HMGB3P20, Length 600 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P20-201ENST00000417997 AGPAT4Q9NRZ5 378 aa3.47□□□□□ -1.85
HMGB3P20-201ENST00000417997 CUTCQ9NTM9 273 aa3.47□□□□□ -1.85
HMGB3P20-201ENST00000417997 EXD2Q9NVH0 621 aa3.47□□□□□ -1.85
HMGB3P20-201ENST00000417997 AKAP7Q9P0M2 348 aaPredicted RBP3.47□□□□□ -1.85
HMGB3P20-201ENST00000417997 TMEM9Q9P0T7 183 aa3.47□□□□□ -1.85
HMGB3P20-201ENST00000417997 IFT80Q9P2H3 777 aaPredicted RBP3.47□□□□□ -1.85
HMGB3P20-201ENST00000417997 NLKQ9UBE8 527 aa3.47□□□□□ -1.85
HMGB3P20-201ENST00000417997 DNAJB9Q9UBS3 223 aa3.47□□□□□ -1.85
HMGB3P20-201ENST00000417997 CES1P1Q9UKY3 287 aa3.47□□□□□ -1.85
HMGB3P20-201ENST00000417997 RARRES3Q9UL19 164 aa3.47□□□□□ -1.85
HMGB3P20-201ENST00000417997 RAB26Q9ULW5 256 aa3.47□□□□□ -1.85
HMGB3P20-201ENST00000417997 CDC14AQ9UNH5 594 aa3.47□□□□□ -1.85
HMGB3P20-201ENST00000417997 SAMHD1Q9Y3Z3 626 aaKnown RBP3.47□□□□□ -1.85
HMGB3P20-201ENST00000417997 FAM32AQ9Y421 112 aaKnown RBP3.47□□□□□ -1.85
HMGB3P20-201ENST00000417997 PCDHGA5Q9Y5G8 931 aa3.47□□□□□ -1.85
HMGB3P20-201ENST00000417997 GMEB1Q9Y692 573 aa3.47□□□□□ -1.85
HMGB3P20-201ENST00000417997 AP4B1Q9Y6B7 739 aa3.47□□□□□ -1.85
HMGB3P20-201ENST00000417997 MAU2Q9Y6X3 613 aa3.47□□□□□ -1.85
HMGB3P20-201ENST00000417997 CCDC88CQ9P219 2028 aa3.47□□□□□ -1.85
HMGB3P20-201ENST00000417997 LAMA2P24043 3122 aaKnown RBP3.47□□□□□ -1.85
HMGB3P20-201ENST00000417997 A0A087WYN8 130 aa3.46□□□□□ -1.86
HMGB3P20-201ENST00000417997 IGLV5-52A0A0A0MRZ9 124 aa3.46□□□□□ -1.86
HMGB3P20-201ENST00000417997 A0A1B0GX78 115 aa3.46□□□□□ -1.86
HMGB3P20-201ENST00000417997 SYNDIG1LA6NDD5 238 aa3.46□□□□□ -1.86
HMGB3P20-201ENST00000417997 WASHC1A8K0Z3 465 aa3.46□□□□□ -1.86
HMGB3P20-201ENST00000417997 C17orf100A8MU93 164 aa3.46□□□□□ -1.86
HMGB3P20-201ENST00000417997 G3V2T6 193 aa3.46□□□□□ -1.86
HMGB3P20-201ENST00000417997 M0QX08 132 aa3.46□□□□□ -1.86
HMGB3P20-201ENST00000417997 PDLIM1O00151 329 aa3.46□□□□□ -1.86
HMGB3P20-201ENST00000417997 HMGN4O00479 90 aa3.46□□□□□ -1.86
HMGB3P20-201ENST00000417997 ADAMDEC1O15204 470 aa3.46□□□□□ -1.86
HMGB3P20-201ENST00000417997 TOX3O15405 576 aaPredicted RBP3.46□□□□□ -1.86
HMGB3P20-201ENST00000417997 FLRT2O43155 660 aa3.46□□□□□ -1.86
HMGB3P20-201ENST00000417997 ZNF749O43361 778 aa3.46□□□□□ -1.86
HMGB3P20-201ENST00000417997 B4GAT1O43505 415 aa3.46□□□□□ -1.86
HMGB3P20-201ENST00000417997 HCRTR1O43613 425 aa3.46□□□□□ -1.86
HMGB3P20-201ENST00000417997 BUB3O43684 328 aa3.46□□□□□ -1.86
HMGB3P20-201ENST00000417997 HS6ST1O60243 411 aa3.46□□□□□ -1.86
HMGB3P20-201ENST00000417997 PGM3O95394 542 aa3.46□□□□□ -1.86
HMGB3P20-201ENST00000417997 LDOC1O95751 146 aaPredicted RBP3.46□□□□□ -1.86
HMGB3P20-201ENST00000417997 GPR75O95800 540 aa3.46□□□□□ -1.86
HMGB3P20-201ENST00000417997 AK1P00568 194 aa3.46□□□□□ -1.86
HMGB3P20-201ENST00000417997 HPRP00739 348 aa3.46□□□□□ -1.86
HMGB3P20-201ENST00000417997 C1QCP02747 245 aa3.46□□□□□ -1.86
HMGB3P20-201ENST00000417997 ATP1B1P05026 303 aa3.46□□□□□ -1.86
HMGB3P20-201ENST00000417997 HBQ1P09105 142 aa3.46□□□□□ -1.86
HMGB3P20-201ENST00000417997 IFI6P09912 130 aa3.46□□□□□ -1.86
HMGB3P20-201ENST00000417997 ANKRD34CP0C6C1 535 aa3.46□□□□□ -1.86
HMGB3P20-201ENST00000417997 UBTFL6P0CB48 400 aaPredicted RBP3.46□□□□□ -1.86
HMGB3P20-201ENST00000417997 ZNF883P0CG24 379 aa3.46□□□□□ -1.86
HMGB3P20-201ENST00000417997 GIMD1P0DJR0 217 aa3.46□□□□□ -1.86
HMGB3P20-201ENST00000417997 THRBP10828 461 aa3.46□□□□□ -1.86
HMGB3P20-201ENST00000417997 CKMT2P17540 419 aa3.46□□□□□ -1.86
HMGB3P20-201ENST00000417997 NELFEP18615 380 aaKnown RBP3.46□□□□□ -1.86
HMGB3P20-201ENST00000417997 CDH2P19022 906 aaPredicted RBP3.46□□□□□ -1.86
HMGB3P20-201ENST00000417997 TNNI3P19429 210 aa3.46□□□□□ -1.86
HMGB3P20-201ENST00000417997 CD1CP29017 333 aa3.46□□□□□ -1.86
HMGB3P20-201ENST00000417997 RRM2P31350 389 aa3.46□□□□□ -1.86
HMGB3P20-201ENST00000417997 IFNA8P32881 189 aa3.46□□□□□ -1.86
HMGB3P20-201ENST00000417997 CSTF2P33240 577 aaKnown RBP eCLIP3.46□□□□□ -1.86
HMGB3P20-201ENST00000417997 XCR1P46094 333 aa3.46□□□□□ -1.86
HMGB3P20-201ENST00000417997 OR1D4P47884 311 aa3.46□□□□□ -1.86
HMGB3P20-201ENST00000417997 MTNR1AP48039 350 aa3.46□□□□□ -1.86
HMGB3P20-201ENST00000417997 GABRA4P48169 554 aa3.46□□□□□ -1.86
HMGB3P20-201ENST00000417997 RFX3P48380 749 aa3.46□□□□□ -1.86
HMGB3P20-201ENST00000417997 RAD23AP54725 363 aa3.46□□□□□ -1.86
HMGB3P20-201ENST00000417997 SELENOWP63302 87 aa3.46□□□□□ -1.86
HMGB3P20-201ENST00000417997 SERTAD2Q14140 314 aa3.46□□□□□ -1.86
HMGB3P20-201ENST00000417997 C16orf72Q14CZ0 275 aa3.46□□□□□ -1.86
HMGB3P20-201ENST00000417997 CEBPEQ15744 281 aa3.46□□□□□ -1.86
HMGB3P20-201ENST00000417997 SYPL1Q16563 259 aa3.46□□□□□ -1.86
HMGB3P20-201ENST00000417997 CLPPQ16740 277 aaPredicted RBP3.46□□□□□ -1.86
HMGB3P20-201ENST00000417997 SYT16Q17RD7 645 aa3.46□□□□□ -1.86
HMGB3P20-201ENST00000417997 ZNF672Q499Z4 452 aaPredicted RBP3.46□□□□□ -1.86
HMGB3P20-201ENST00000417997 C1orf189Q5VU69 101 aa3.46□□□□□ -1.86
HMGB3P20-201ENST00000417997 OR2T5Q6IEZ7 315 aa3.46□□□□□ -1.86
HMGB3P20-201ENST00000417997 MFSD12Q6NUT3 480 aa3.46□□□□□ -1.86
HMGB3P20-201ENST00000417997 ZCCHC12Q6PEW1 402 aa3.46□□□□□ -1.86
HMGB3P20-201ENST00000417997 CCDC80Q76M96 950 aa3.46□□□□□ -1.86
HMGB3P20-201ENST00000417997 VTCN1Q7Z7D3 282 aa3.46□□□□□ -1.86
HMGB3P20-201ENST00000417997 EPHX4Q8IUS5 362 aa3.46□□□□□ -1.86
HMGB3P20-201ENST00000417997 PEX5LQ8IYB4 626 aa3.46□□□□□ -1.86
HMGB3P20-201ENST00000417997 ST13P4Q8IZP2 240 aaPredicted RBP3.46□□□□□ -1.86
HMGB3P20-201ENST00000417997 DHRSXQ8N5I4 330 aa3.46□□□□□ -1.86
HMGB3P20-201ENST00000417997 CDRT4Q8N9R6 151 aa3.46□□□□□ -1.86
HMGB3P20-201ENST00000417997 SMYD1Q8NB12 490 aa3.46□□□□□ -1.86
HMGB3P20-201ENST00000417997 NEXN-AS1Q8NBZ9 246 aa3.46□□□□□ -1.86
HMGB3P20-201ENST00000417997 ZBTB44Q8NCP5 570 aa3.46□□□□□ -1.86
HMGB3P20-201ENST00000417997 ZNF555Q8NEP9 628 aa3.46□□□□□ -1.86
HMGB3P20-201ENST00000417997 OR7G2Q8NG99 324 aa3.46□□□□□ -1.86
HMGB3P20-201ENST00000417997 OR4D9Q8NGE8 314 aa3.46□□□□□ -1.86
HMGB3P20-201ENST00000417997 OR52R1Q8NGF1 315 aa3.46□□□□□ -1.86
HMGB3P20-201ENST00000417997 OR10Q1Q8NGQ4 319 aa3.46□□□□□ -1.86
HMGB3P20-201ENST00000417997 OR2T29Q8NH02 315 aa3.46□□□□□ -1.86
HMGB3P20-201ENST00000417997 OR51Q1Q8NH59 317 aa3.46□□□□□ -1.86
HMGB3P20-201ENST00000417997 OR1L3Q8NH93 324 aa3.46□□□□□ -1.86
HMGB3P20-201ENST00000417997 VANGL1Q8TAA9 524 aaPredicted RBP3.46□□□□□ -1.86
HMGB3P20-201ENST00000417997 ZNF675Q8TD23 568 aa3.46□□□□□ -1.86
HMGB3P20-201ENST00000417997 MAGEE2Q8TD90 523 aaPredicted RBP3.46□□□□□ -1.86
HMGB3P20-201ENST00000417997 SLC38A5Q8WUX1 472 aa3.46□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms