RNA–Protein interactions for RNA: ENST00000417040.1

UBR4-205, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 5

Gene UBR4, Length 6,175 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-205ENST00000417040 CA14Q9ULX7 337 aa11.22□□□□□ -0.61
UBR4-205ENST00000417040 KRBOX1C9JBD0 128 aa11.22□□□□□ -0.61
UBR4-205ENST00000417040 SLC43A1O75387 559 aa11.22□□□□□ -0.61
UBR4-205ENST00000417040 TUSC2O75896 110 aa11.22□□□□□ -0.61
UBR4-205ENST00000417040 GABARAPO95166 117 aa11.22□□□□□ -0.61
UBR4-205ENST00000417040 ELAVL4P26378 380 aaKnown RBP11.22□□□□□ -0.61
UBR4-205ENST00000417040 P2RY2P41231 377 aa11.22□□□□□ -0.61
UBR4-205ENST00000417040 UBE2MP61081 183 aaKnown RBP11.22□□□□□ -0.61
UBR4-205ENST00000417040 SHEQ5VZ18 495 aa11.22□□□□□ -0.61
UBR4-205ENST00000417040 FAAP20Q6NZ36 180 aa11.22□□□□□ -0.61
UBR4-205ENST00000417040 VRK3Q8IV63 474 aa11.22□□□□□ -0.61
UBR4-205ENST00000417040 FUNDC1Q8IVP5 155 aa11.22□□□□□ -0.61
UBR4-205ENST00000417040 RSPRY1Q96DX4 576 aa11.22□□□□□ -0.61
UBR4-205ENST00000417040 NICN1Q9BSH3 213 aa11.22□□□□□ -0.61
UBR4-205ENST00000417040 NKX6-2Q9C056 277 aaPredicted RBP11.22□□□□□ -0.61
UBR4-205ENST00000417040 IGKV6-21A0A0C4DH24 114 aa11.21□□□□□ -0.61
UBR4-205ENST00000417040 A0A1W2PPV4 95 aa11.21□□□□□ -0.61
UBR4-205ENST00000417040 HRO43593 1189 aa11.21□□□□□ -0.61
UBR4-205ENST00000417040 FCGR2AP12318 317 aa11.21□□□□□ -0.61
UBR4-205ENST00000417040 PAQR6Q6TCH4 344 aa11.21□□□□□ -0.61
UBR4-205ENST00000417040 ZC3HAV1Q7Z2W4 902 aaKnown RBP11.21□□□□□ -0.61
UBR4-205ENST00000417040 CLEC14AQ86T13 490 aa11.21□□□□□ -0.61
UBR4-205ENST00000417040 SERINC5Q86VE9 423 aa11.21□□□□□ -0.61
UBR4-205ENST00000417040 RBM45Q8IUH3 476 aaKnown RBP11.21□□□□□ -0.61
UBR4-205ENST00000417040 SMAP2Q8WU79 429 aaPredicted RBP11.21□□□□□ -0.61
UBR4-205ENST00000417040 BORCS7Q96B45 105 aa11.21□□□□□ -0.61
UBR4-205ENST00000417040 FAM234AQ9H0X4 552 aa11.21□□□□□ -0.61
UBR4-205ENST00000417040 PCYT1BQ9Y5K3 369 aaPredicted RBP11.21□□□□□ -0.61
UBR4-205ENST00000417040 GRXCR2A6NFK2 248 aa11.21□□□□□ -0.61
UBR4-205ENST00000417040 TAPBPO15533 448 aa11.21□□□□□ -0.61
UBR4-205ENST00000417040 S100A11P31949 105 aa11.21□□□□□ -0.61
UBR4-205ENST00000417040 ETV1P50549 477 aa11.21□□□□□ -0.61
UBR4-205ENST00000417040 SELENOVP59797 346 aa11.21□□□□□ -0.61
UBR4-205ENST00000417040 GPLD1P80108 840 aa11.21□□□□□ -0.61
UBR4-205ENST00000417040 ZP2Q05996 745 aa11.21□□□□□ -0.61
UBR4-205ENST00000417040 TESK1Q15569 626 aa11.21□□□□□ -0.61
UBR4-205ENST00000417040 TPRA1Q86W33 373 aa11.21□□□□□ -0.61
UBR4-205ENST00000417040 LIX1LQ8IVB5 337 aa11.21□□□□□ -0.61
UBR4-205ENST00000417040 PFN4Q8NHR9 129 aa11.21□□□□□ -0.61
UBR4-205ENST00000417040 HOXD1Q9GZZ0 328 aa11.21□□□□□ -0.61
UBR4-205ENST00000417040 EMC7Q9NPA0 242 aa11.21□□□□□ -0.61
UBR4-205ENST00000417040 RGPD2P0DJD1 1756 aa11.21□□□□□ -0.61
UBR4-205ENST00000417040 IGKV6D-21A0A0A0MT36 114 aa11.21□□□□□ -0.61
UBR4-205ENST00000417040 AIFM1O95831 613 aa11.21□□□□□ -0.61
UBR4-205ENST00000417040 TAGLN2P37802 199 aaKnown RBP11.21□□□□□ -0.61
UBR4-205ENST00000417040 ERVK-16P61578 105 aa11.21□□□□□ -0.61
UBR4-205ENST00000417040 TAGLNQ01995 201 aaKnown RBP11.21□□□□□ -0.61
UBR4-205ENST00000417040 TMEM184AQ6ZMB5 413 aa11.21□□□□□ -0.61
UBR4-205ENST00000417040 SUMF1Q8NBK3 374 aa11.21□□□□□ -0.61
UBR4-205ENST00000417040 NIT2Q9NQR4 276 aa11.21□□□□□ -0.61
UBR4-205ENST00000417040 FZD9O00144 591 aa11.21□□□□□ -0.62
UBR4-205ENST00000417040 SSTP61278 116 aa11.21□□□□□ -0.62
UBR4-205ENST00000417040 YOD1Q5VVQ6 348 aaPredicted RBP11.21□□□□□ -0.62
UBR4-205ENST00000417040 RPL22L1Q6P5R6 122 aaKnown RBP11.21□□□□□ -0.62
UBR4-205ENST00000417040 KCNIP4Q6PIL6 250 aa11.21□□□□□ -0.62
UBR4-205ENST00000417040 PLPP7Q8NBV4 271 aa11.21□□□□□ -0.62
UBR4-205ENST00000417040 SPIN2AQ99865 258 aa11.21□□□□□ -0.62
UBR4-205ENST00000417040 SPIN2BQ9BPZ2 258 aa11.21□□□□□ -0.62
UBR4-205ENST00000417040 SYT17Q9BSW7 474 aa11.21□□□□□ -0.62
UBR4-205ENST00000417040 P04436 131 aa11.21□□□□□ -0.62
UBR4-205ENST00000417040 IRF2P14316 349 aa11.21□□□□□ -0.62
UBR4-205ENST00000417040 TIMP2P16035 220 aa11.21□□□□□ -0.62
UBR4-205ENST00000417040 SLC19A1P41440 591 aa11.21□□□□□ -0.62
UBR4-205ENST00000417040 TSPAN31Q12999 210 aa11.21□□□□□ -0.62
UBR4-205ENST00000417040 GPR176Q14439 515 aa11.21□□□□□ -0.62
UBR4-205ENST00000417040 MELKQ14680 651 aa11.21□□□□□ -0.62
UBR4-205ENST00000417040 DEFB133Q30KQ1 61 aa11.21□□□□□ -0.62
UBR4-205ENST00000417040 C17orf107Q6ZR85 190 aa11.21□□□□□ -0.62
UBR4-205ENST00000417040 Q6ZSR9 355 aa11.21□□□□□ -0.62
UBR4-205ENST00000417040 ARRDC2Q8TBH0 407 aa11.21□□□□□ -0.62
UBR4-205ENST00000417040 RBMXL1Q96E39 390 aaKnown RBP11.21□□□□□ -0.62
UBR4-205ENST00000417040 KATNB1Q9BVA0 655 aa11.21□□□□□ -0.62
UBR4-205ENST00000417040 SLC25A31Q9H0C2 315 aa11.21□□□□□ -0.62
UBR4-205ENST00000417040 CBLCQ9ULV8 474 aa11.21□□□□□ -0.62
UBR4-205ENST00000417040 PLEKHM1Q9Y4G2 1056 aa11.21□□□□□ -0.62
UBR4-205ENST00000417040 CORINQ9Y5Q5 1042 aa11.21□□□□□ -0.62
UBR4-205ENST00000417040 CITO14578 2027 aa11.21□□□□□ -0.62
UBR4-205ENST00000417040 TMEM235A6NFC5 223 aa11.2□□□□□ -0.62
UBR4-205ENST00000417040 P2RX6O15547 441 aa11.2□□□□□ -0.62
UBR4-205ENST00000417040 ELK1P19419 428 aa11.2□□□□□ -0.62
UBR4-205ENST00000417040 OGFOD3Q6PK18 319 aa11.2□□□□□ -0.62
UBR4-205ENST00000417040 CREB3L2Q70SY1 520 aa11.2□□□□□ -0.62
UBR4-205ENST00000417040 LINC00346Q8IVM7 164 aa11.2□□□□□ -0.62
UBR4-205ENST00000417040 SLC30A7Q8NEW0 376 aa11.2□□□□□ -0.62
UBR4-205ENST00000417040 RNF128Q8TEB7 428 aa11.2□□□□□ -0.62
UBR4-205ENST00000417040 HRASLS5Q96KN8 279 aa11.2□□□□□ -0.62
UBR4-205ENST00000417040 TP53TG5Q9Y2B4 290 aa11.2□□□□□ -0.62
UBR4-205ENST00000417040 CHRM4P08173 479 aa11.2□□□□□ -0.62
UBR4-205ENST00000417040 RAB40ALP0C0E4 278 aa11.2□□□□□ -0.62
UBR4-205ENST00000417040 FOLR1P15328 257 aa11.2□□□□□ -0.62
UBR4-205ENST00000417040 CSF2RAP15509 400 aa11.2□□□□□ -0.62
UBR4-205ENST00000417040 P2RX3P56373 397 aa11.2□□□□□ -0.62
UBR4-205ENST00000417040 GDPD3Q7L5L3 318 aa11.2□□□□□ -0.62
UBR4-205ENST00000417040 AVL9Q8NBF6 648 aa11.2□□□□□ -0.62
UBR4-205ENST00000417040 ZFAND1Q8TCF1 268 aa11.2□□□□□ -0.62
UBR4-205ENST00000417040 ASB11Q8WXH4 323 aa11.2□□□□□ -0.62
UBR4-205ENST00000417040 RAB40AQ8WXH6 277 aa11.2□□□□□ -0.62
UBR4-205ENST00000417040 DDOQ99489 341 aa11.2□□□□□ -0.62
UBR4-205ENST00000417040 ZFP57Q9NU63 452 aa11.2□□□□□ -0.62
UBR4-205ENST00000417040 HCSTQ9UBK5 93 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 66.1 ms