RNA–Protein interactions for RNA: ENST00000413442.5

USP54-202, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 4

Gene USP54, Length 543 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-202ENST00000413442 ALG10BQ5I7T1 473 aa5.67□□□□□ -1.5
USP54-202ENST00000413442 OTUD3Q5T2D3 398 aaPredicted RBP5.67□□□□□ -1.5
USP54-202ENST00000413442 SHEQ5VZ18 495 aa5.67□□□□□ -1.5
USP54-202ENST00000413442 PPP4R4Q6NUP7 873 aa5.67□□□□□ -1.5
USP54-202ENST00000413442 KLHL17Q6TDP4 642 aa5.67□□□□□ -1.5
USP54-202ENST00000413442 H1FNTQ75WM6 255 aaPredicted RBP5.67□□□□□ -1.5
USP54-202ENST00000413442 CPLX4Q7Z7G2 160 aa5.67□□□□□ -1.5
USP54-202ENST00000413442 CALHM3Q86XJ0 350 aa5.67□□□□□ -1.5
USP54-202ENST00000413442 CADM2Q8N3J6 435 aa5.67□□□□□ -1.5
USP54-202ENST00000413442 ZNF611Q8N823 705 aa5.67□□□□□ -1.5
USP54-202ENST00000413442 FAM169BQ8N8A8 192 aa5.67□□□□□ -1.5
USP54-202ENST00000413442 IL17RDQ8NFM7 739 aa5.67□□□□□ -1.5
USP54-202ENST00000413442 NFKBIDQ8NI38 313 aa5.67□□□□□ -1.5
USP54-202ENST00000413442 MAGEE2Q8TD90 523 aaPredicted RBP5.67□□□□□ -1.5
USP54-202ENST00000413442 ABHD3Q8WU67 409 aa5.67□□□□□ -1.5
USP54-202ENST00000413442 PROX1Q92786 737 aa5.67□□□□□ -1.5
USP54-202ENST00000413442 C3orf49Q96BT1 292 aa5.67□□□□□ -1.5
USP54-202ENST00000413442 ZBTB9Q96C00 473 aa5.67□□□□□ -1.5
USP54-202ENST00000413442 ARL5BQ96KC2 179 aa5.67□□□□□ -1.5
USP54-202ENST00000413442 OXGR1Q96P68 337 aa5.67□□□□□ -1.5
USP54-202ENST00000413442 NPAS1Q99742 590 aa5.67□□□□□ -1.5
USP54-202ENST00000413442 GPATCH1Q9BRR8 931 aaKnown RBP5.67□□□□□ -1.5
USP54-202ENST00000413442 SRXN1Q9BYN0 137 aa5.67□□□□□ -1.5
USP54-202ENST00000413442 QRSL1Q9H0R6 528 aaKnown RBP5.67□□□□□ -1.5
USP54-202ENST00000413442 TMEM185BQ9H7F4 350 aa5.67□□□□□ -1.5
USP54-202ENST00000413442 RLIMQ9NVW2 624 aa5.67□□□□□ -1.5
USP54-202ENST00000413442 TAS2R16Q9NYV7 291 aa5.67□□□□□ -1.5
USP54-202ENST00000413442 STX18Q9P2W9 335 aaKnown RBP5.67□□□□□ -1.5
USP54-202ENST00000413442 UPB1Q9UBR1 384 aa5.67□□□□□ -1.5
USP54-202ENST00000413442 ING1Q9UK53 422 aaPredicted RBP5.67□□□□□ -1.5
USP54-202ENST00000413442 RCE1Q9Y256 329 aa5.67□□□□□ -1.5
USP54-202ENST00000413442 AMDHD2Q9Y303 409 aa5.67□□□□□ -1.5
USP54-202ENST00000413442 FLVCR1Q9Y5Y0 555 aa5.67□□□□□ -1.5
USP54-202ENST00000413442 CENPEQ02224 2701 aa5.67□□□□□ -1.5
USP54-202ENST00000413442 ADGRG4Q8IZF6 3080 aa5.66□□□□□ -1.5
USP54-202ENST00000413442 A0A0B4J2E0 115 aa5.66□□□□□ -1.5
USP54-202ENST00000413442 LOC100653049A0A140TA62 436 aa5.66□□□□□ -1.5
USP54-202ENST00000413442 A0A1B0GX12 115 aa5.66□□□□□ -1.5
USP54-202ENST00000413442 CIB4A0PJX0 185 aa5.66□□□□□ -1.5
USP54-202ENST00000413442 ELOVL7A1L3X0 281 aa5.66□□□□□ -1.5
USP54-202ENST00000413442 TRAPPC13A5PLN9 417 aa5.66□□□□□ -1.5
USP54-202ENST00000413442 OR5H1A6NKK0 313 aa5.66□□□□□ -1.5
USP54-202ENST00000413442 CLDN24A6NM45 220 aa5.66□□□□□ -1.5
USP54-202ENST00000413442 FAM171A2A8MVW0 826 aa5.66□□□□□ -1.5
USP54-202ENST00000413442 CENPBD1B2RD01 187 aa5.66□□□□□ -1.5
USP54-202ENST00000413442 ZNF814B7Z6K7 855 aa5.66□□□□□ -1.5
USP54-202ENST00000413442 FTCDNL1E5RQL4 147 aa5.66□□□□□ -1.5
USP54-202ENST00000413442 RPL36A-HNRNPH2H7BZ11 118 aa5.66□□□□□ -1.5
USP54-202ENST00000413442 FBP2O00757 339 aa5.66□□□□□ -1.5
USP54-202ENST00000413442 KLF4O43474 513 aa5.66□□□□□ -1.5
USP54-202ENST00000413442 CHP2O43745 196 aa5.66□□□□□ -1.5
USP54-202ENST00000413442 ADAM11O75078 769 aa5.66□□□□□ -1.5
USP54-202ENST00000413442 GMNNO75496 209 aa5.66□□□□□ -1.5
USP54-202ENST00000413442 DCTN3O75935 186 aa5.66□□□□□ -1.5
USP54-202ENST00000413442 KRT34O76011 436 aa5.66□□□□□ -1.5
USP54-202ENST00000413442 OPN1LWP04000 364 aa5.66□□□□□ -1.5
USP54-202ENST00000413442 HIST1H2ABP04908 130 aa5.66□□□□□ -1.5
USP54-202ENST00000413442 NUDT7P0C024 238 aa5.66□□□□□ -1.5
USP54-202ENST00000413442 IMPDH2P12268 514 aa5.66□□□□□ -1.5
USP54-202ENST00000413442 CD247P20963 164 aa5.66□□□□□ -1.5
USP54-202ENST00000413442 SHC1P29353 583 aa5.66□□□□□ -1.5
USP54-202ENST00000413442 MPGP29372 298 aa5.66□□□□□ -1.5
USP54-202ENST00000413442 KDELR2P33947 212 aa5.66□□□□□ -1.5
USP54-202ENST00000413442 RBM34P42696 430 aaKnown RBP5.66□□□□□ -1.5
USP54-202ENST00000413442 GZMMP51124 257 aa5.66□□□□□ -1.5
USP54-202ENST00000413442 SELENOWP63302 87 aa5.66□□□□□ -1.5
USP54-202ENST00000413442 PLAURQ03405 335 aa5.66□□□□□ -1.5
USP54-202ENST00000413442 ZP4Q12836 540 aa5.66□□□□□ -1.5
USP54-202ENST00000413442 TESK1Q15569 626 aa5.66□□□□□ -1.5
USP54-202ENST00000413442 OR1Q1Q15612 314 aa5.66□□□□□ -1.5
USP54-202ENST00000413442 ETFDHQ16134 617 aa5.66□□□□□ -1.5
USP54-202ENST00000413442 ACKR1Q16570 336 aa5.66□□□□□ -1.5
USP54-202ENST00000413442 NRF1Q16656 503 aa5.66□□□□□ -1.5
USP54-202ENST00000413442 DUSP7Q16829 419 aa5.66□□□□□ -1.5
USP54-202ENST00000413442 NCMAPQ5T1S8 102 aa5.66□□□□□ -1.5
USP54-202ENST00000413442 TTC33Q6PID6 262 aaPredicted RBP5.66□□□□□ -1.5
USP54-202ENST00000413442 TMEM108Q6UXF1 575 aa5.66□□□□□ -1.5
USP54-202ENST00000413442 PAMR1Q6UXH9 720 aa5.66□□□□□ -1.5
USP54-202ENST00000413442 CREB3L2Q70SY1 520 aa5.66□□□□□ -1.5
USP54-202ENST00000413442 HIST3H2AQ7L7L0 130 aa5.66□□□□□ -1.5
USP54-202ENST00000413442 BHLHA15Q7RTS1 189 aaPredicted RBP5.66□□□□□ -1.5
USP54-202ENST00000413442 AAED1Q7RTV5 226 aa5.66□□□□□ -1.5
USP54-202ENST00000413442 NUFIP2Q7Z417 695 aaKnown RBP5.66□□□□□ -1.5
USP54-202ENST00000413442 HDDC2Q7Z4H3 204 aa5.66□□□□□ -1.5
USP54-202ENST00000413442 SPATA21Q7Z572 469 aa5.66□□□□□ -1.5
USP54-202ENST00000413442 PXKQ7Z7A4 578 aa5.66□□□□□ -1.5
USP54-202ENST00000413442 RETREG3Q86VR2 466 aa5.66□□□□□ -1.5
USP54-202ENST00000413442 PTOV1Q86YD1 416 aa5.66□□□□□ -1.5
USP54-202ENST00000413442 RNF113BQ8IZP6 322 aaKnown RBP5.66□□□□□ -1.5
USP54-202ENST00000413442 UBE2J2Q8N2K1 259 aa5.66□□□□□ -1.5
USP54-202ENST00000413442 ZNF433Q8N7K0 673 aaPredicted RBP5.66□□□□□ -1.5
USP54-202ENST00000413442 ANKS4BQ8N8V4 417 aa5.66□□□□□ -1.5
USP54-202ENST00000413442 OR10A6Q8NH74 314 aa5.66□□□□□ -1.5
USP54-202ENST00000413442 FNDC8Q8TC99 324 aa5.66□□□□□ -1.5
USP54-202ENST00000413442 C10orf82Q8WW14 230 aa5.66□□□□□ -1.5
USP54-202ENST00000413442 LIPHQ8WWY8 451 aa5.66□□□□□ -1.5
USP54-202ENST00000413442 HIST1H2ACQ93077 130 aa5.66□□□□□ -1.5
USP54-202ENST00000413442 MAL2Q969L2 176 aa5.66□□□□□ -1.5
USP54-202ENST00000413442 ZNF524Q96C55 264 aa5.66□□□□□ -1.5
USP54-202ENST00000413442 SLC41A3Q96GZ6 507 aa5.66□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms