RNA–Protein interactions for RNA: ENST00000409025.5

USP39-202, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 5 BASIC

Gene USP39, Length 1,946 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-202ENST00000409025 PLD2O14939 933 aa17.22■□□□□ 0.35
USP39-202ENST00000409025 SUSD5O60279 629 aa17.22■□□□□ 0.35
USP39-202ENST00000409025 KLF7O75840 302 aaPredicted RBP17.22■□□□□ 0.35
USP39-202ENST00000409025 OR2J2O76002 312 aa17.22■□□□□ 0.35
USP39-202ENST00000409025 CD14P08571 375 aa17.22■□□□□ 0.35
USP39-202ENST00000409025 APEHP13798 732 aaKnown RBP17.22■□□□□ 0.35
USP39-202ENST00000409025 CD59P13987 128 aa17.22■□□□□ 0.35
USP39-202ENST00000409025 UQCRC1P31930 480 aa17.22■□□□□ 0.35
USP39-202ENST00000409025 SOX6P35712 828 aa17.22■□□□□ 0.35
USP39-202ENST00000409025 SUMO3P55854 103 aaPredicted RBP17.22■□□□□ 0.35
USP39-202ENST00000409025 LCN1P1Q5VSP4 162 aa17.22■□□□□ 0.35
USP39-202ENST00000409025 OR2Y1Q8NGV0 311 aa17.22■□□□□ 0.35
USP39-202ENST00000409025 TBX5Q99593 518 aa17.22■□□□□ 0.35
USP39-202ENST00000409025 WDR12Q9GZL7 423 aaKnown RBP17.22■□□□□ 0.35
USP39-202ENST00000409025 ZNF700Q9H0M5 742 aa17.22■□□□□ 0.35
USP39-202ENST00000409025 PNMA8CA0A1B0GUJ8 204 aa17.21■□□□□ 0.35
USP39-202ENST00000409025 IMPA2O14732 288 aa17.21■□□□□ 0.35
USP39-202ENST00000409025 BGLAPP02818 100 aa17.21■□□□□ 0.35
USP39-202ENST00000409025 MRPL3P09001 348 aaKnown RBP17.21■□□□□ 0.35
USP39-202ENST00000409025 CTXN1P60606 82 aa17.21■□□□□ 0.35
USP39-202ENST00000409025 DBPQ10586 325 aaPredicted RBP17.21■□□□□ 0.35
USP39-202ENST00000409025 GALEQ14376 348 aa17.21■□□□□ 0.35
USP39-202ENST00000409025 EXT1Q16394 746 aa17.21■□□□□ 0.35
USP39-202ENST00000409025 OR5M10Q6IEU7 315 aa17.21■□□□□ 0.35
USP39-202ENST00000409025 LYPD8Q6UX82 237 aa17.21■□□□□ 0.35
USP39-202ENST00000409025 ADGRG3Q86Y34 549 aa17.21■□□□□ 0.35
USP39-202ENST00000409025 NAXDQ8IW45 347 aa17.21■□□□□ 0.35
USP39-202ENST00000409025 NPEPL1Q8NDH3 523 aa17.21■□□□□ 0.35
USP39-202ENST00000409025 RNF138Q8WVD3 245 aa17.21■□□□□ 0.35
USP39-202ENST00000409025 SMPDL3BQ92485 455 aa17.21■□□□□ 0.35
USP39-202ENST00000409025 RASD2Q96D21 266 aa17.21■□□□□ 0.35
USP39-202ENST00000409025 DTNBP1Q96EV8 351 aa17.21■□□□□ 0.35
USP39-202ENST00000409025 NMNAT3Q96T66 252 aa17.21■□□□□ 0.35
USP39-202ENST00000409025 SH3GL3Q99963 347 aa17.21■□□□□ 0.35
USP39-202ENST00000409025 ASPNQ9BXN1 380 aa17.21■□□□□ 0.35
USP39-202ENST00000409025 AKIP1Q9NQ31 210 aa17.21■□□□□ 0.35
USP39-202ENST00000409025 TOR4AQ9NXH8 423 aa17.21■□□□□ 0.35
USP39-202ENST00000409025 KLRF1Q9NZS2 232 aa17.21■□□□□ 0.35
USP39-202ENST00000409025 MYO15AQ9UKN7 3530 aa17.21■□□□□ 0.35
USP39-202ENST00000409025 TMEM72A0PK05 275 aa17.21■□□□□ 0.35
USP39-202ENST00000409025 C2orf72A6NCS6 295 aa17.21■□□□□ 0.35
USP39-202ENST00000409025 A8MVM7 634 aa17.21■□□□□ 0.35
USP39-202ENST00000409025 CDX4O14627 284 aaPredicted RBP17.21■□□□□ 0.35
USP39-202ENST00000409025 SLC30A4O14863 429 aa17.21■□□□□ 0.35
USP39-202ENST00000409025 MT-ATP6P00846 226 aa17.21■□□□□ 0.35
USP39-202ENST00000409025 CD63P08962 238 aa17.21■□□□□ 0.35
USP39-202ENST00000409025 FBXO45P0C2W1 286 aa17.21■□□□□ 0.35
USP39-202ENST00000409025 GABRA5P31644 462 aa17.21■□□□□ 0.35
USP39-202ENST00000409025 FOLR3P41439 243 aa17.21■□□□□ 0.35
USP39-202ENST00000409025 ACTC1P68032 377 aa17.21■□□□□ 0.35
USP39-202ENST00000409025 ACTA1P68133 377 aa17.21■□□□□ 0.35
USP39-202ENST00000409025 RPL18Q07020 188 aaKnown RBP17.21■□□□□ 0.35
USP39-202ENST00000409025 JAZF1Q86VZ6 243 aa17.21■□□□□ 0.35
USP39-202ENST00000409025 ST8SIA1Q92185 356 aa17.21■□□□□ 0.35
USP39-202ENST00000409025 TMEM203Q969S6 136 aa17.21■□□□□ 0.35
USP39-202ENST00000409025 NXF2Q9GZY0 626 aaKnown RBP17.21■□□□□ 0.35
USP39-202ENST00000409025 GALNT9Q9HCQ5 603 aa17.21■□□□□ 0.35
USP39-202ENST00000409025 SDHAF3Q9NRP4 125 aa17.21■□□□□ 0.35
USP39-202ENST00000409025 SF3B6Q9Y3B4 125 aaKnown RBP17.21■□□□□ 0.35
USP39-202ENST00000409025 NCOR1O75376 2440 aa17.2■□□□□ 0.34
USP39-202ENST00000409025 TEX13CA0A0J9YWL9 993 aa17.2■□□□□ 0.34
USP39-202ENST00000409025 ZNF670-ZNF695F2Z2N8 137 aa17.2■□□□□ 0.34
USP39-202ENST00000409025 STK17BO94768 372 aa17.2■□□□□ 0.34
USP39-202ENST00000409025 LALBAP00709 142 aa17.2■□□□□ 0.34
USP39-202ENST00000409025 COX6A1P12074 109 aa17.2■□□□□ 0.34
USP39-202ENST00000409025 RPS25P62851 125 aaKnown RBP17.2■□□□□ 0.34
USP39-202ENST00000409025 E2F1Q01094 437 aa17.2■□□□□ 0.34
USP39-202ENST00000409025 BDH1Q02338 343 aa17.2■□□□□ 0.34
USP39-202ENST00000409025 PON3Q15166 354 aa17.2■□□□□ 0.34
USP39-202ENST00000409025 SF3A2Q15428 464 aaKnown RBP17.2■□□□□ 0.34
USP39-202ENST00000409025 SLC35D3Q5M8T2 416 aa17.2■□□□□ 0.34
USP39-202ENST00000409025 C16orf87Q6PH81 154 aa17.2■□□□□ 0.34
USP39-202ENST00000409025 C5orf46Q6UWT4 87 aa17.2■□□□□ 0.34
USP39-202ENST00000409025 MAMDC2Q7Z304 686 aaPredicted RBP17.2■□□□□ 0.34
USP39-202ENST00000409025 FAM122BQ7Z309 247 aa17.2■□□□□ 0.34
USP39-202ENST00000409025 KLBQ86Z14 1044 aa17.2■□□□□ 0.34
USP39-202ENST00000409025 ZFP41Q8N8Y5 198 aa17.2■□□□□ 0.34
USP39-202ENST00000409025 STK35Q8TDR2 534 aa17.2■□□□□ 0.34
USP39-202ENST00000409025 C1GALT1C1Q96EU7 318 aa17.2■□□□□ 0.34
USP39-202ENST00000409025 TRMT61AQ96FX7 289 aaKnown RBP17.2■□□□□ 0.34
USP39-202ENST00000409025 IMMP1LQ96LU5 166 aa17.2■□□□□ 0.34
USP39-202ENST00000409025 Q96M85 177 aa17.2■□□□□ 0.34
USP39-202ENST00000409025 RASL10BQ96S79 203 aa17.2■□□□□ 0.34
USP39-202ENST00000409025 DDOQ99489 341 aa17.2■□□□□ 0.34
USP39-202ENST00000409025 ZPBPQ9BS86 351 aa17.2■□□□□ 0.34
USP39-202ENST00000409025 CDADC1Q9BWV3 514 aa17.2■□□□□ 0.34
USP39-202ENST00000409025 SIAEQ9HAT2 523 aa17.2■□□□□ 0.34
USP39-202ENST00000409025 PALMDQ9NP74 551 aa17.2■□□□□ 0.34
USP39-202ENST00000409025 TXNL4BQ9NX01 149 aaKnown RBP17.2■□□□□ 0.34
USP39-202ENST00000409025 HS3ST3B1Q9Y662 390 aa17.2■□□□□ 0.34
USP39-202ENST00000409025 RALGAPA1Q6GYQ0 2036 aa17.2■□□□□ 0.34
USP39-202ENST00000409025 KIF26BQ2KJY2 2108 aa17.2■□□□□ 0.34
USP39-202ENST00000409025 J3QRK9 145 aa17.19■□□□□ 0.34
USP39-202ENST00000409025 F13BP05160 661 aa17.19■□□□□ 0.34
USP39-202ENST00000409025 SDHAP31040 664 aa17.19■□□□□ 0.34
USP39-202ENST00000409025 NTRK2Q16620 822 aa17.19■□□□□ 0.34
USP39-202ENST00000409025 C1QL3Q5VWW1 255 aa17.19■□□□□ 0.34
USP39-202ENST00000409025 LEG1Q6P5S2 330 aa17.19■□□□□ 0.34
USP39-202ENST00000409025 RAB11FIP2Q7L804 512 aa17.19■□□□□ 0.34
USP39-202ENST00000409025 POMGNT2Q8NAT1 580 aa17.19■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms