RNA–Protein interactions for RNA: ENST00000378078.4

RGP1-201, Transcript of RGP1 homolog, RAB6A GEF complex partner 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RGP1, Length 7,018 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGP1-201ENST00000378078 PAGE3Q5JUK9 113 aa15.2■□□□□ 0.02
RGP1-201ENST00000378078 ZNF813Q6ZN06 617 aa15.2■□□□□ 0.02
RGP1-201ENST00000378078 SNAPC3Q92966 411 aa15.2■□□□□ 0.02
RGP1-201ENST00000378078 FAM103A1Q9BTL3 118 aaKnown RBP15.2■□□□□ 0.02
RGP1-201ENST00000378078 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP15.2■□□□□ 0.02
RGP1-201ENST00000378078 IGSF5Q9NSI5 407 aa15.2■□□□□ 0.02
RGP1-201ENST00000378078 H0YAE9 185 aa15.2■□□□□ 0.02
RGP1-201ENST00000378078 PRDX3P30048 256 aaKnown RBP15.2■□□□□ 0.02
RGP1-201ENST00000378078 TSSK4Q6SA08 328 aa15.2■□□□□ 0.02
RGP1-201ENST00000378078 UHRF2Q96PU4 802 aa15.2■□□□□ 0.02
RGP1-201ENST00000378078 THAP7Q9BT49 309 aaPredicted RBP15.2■□□□□ 0.02
RGP1-201ENST00000378078 HAPLN2Q9GZV7 340 aa15.2■□□□□ 0.02
RGP1-201ENST00000378078 SSUH2Q9Y2M2 353 aa15.2■□□□□ 0.02
RGP1-201ENST00000378078 COQ4Q9Y3A0 265 aa15.2■□□□□ 0.02
RGP1-201ENST00000378078 PARP4Q9UKK3 1724 aaKnown RBP15.2■□□□□ 0.02
RGP1-201ENST00000378078 hCG_1809904A0A1W2PP81 198 aa15.2■□□□□ 0.02
RGP1-201ENST00000378078 A0A1W2PPE2 198 aa15.2■□□□□ 0.02
RGP1-201ENST00000378078 A0A1W2PR64 198 aa15.2■□□□□ 0.02
RGP1-201ENST00000378078 SRPX2O60687 465 aaPredicted RBP15.2■□□□□ 0.02
RGP1-201ENST00000378078 TOX4O94842 621 aa15.2■□□□□ 0.02
RGP1-201ENST00000378078 NSA2O95478 260 aaKnown RBP15.2■□□□□ 0.02
RGP1-201ENST00000378078 P2RX3P56373 397 aa15.2■□□□□ 0.02
RGP1-201ENST00000378078 TBC1D28Q2M2D7 210 aa15.2■□□□□ 0.02
RGP1-201ENST00000378078 ADPRMQ3LIE5 342 aa15.2■□□□□ 0.02
RGP1-201ENST00000378078 MRPL2Q5T653 305 aaKnown RBP15.2■□□□□ 0.02
RGP1-201ENST00000378078 FAM122CQ6P4D5 195 aa15.2■□□□□ 0.02
RGP1-201ENST00000378078 ZNF322Q6U7Q0 402 aaPredicted RBP15.2■□□□□ 0.02
RGP1-201ENST00000378078 VASH2Q86V25 355 aa15.2■□□□□ 0.02
RGP1-201ENST00000378078 CDRT4Q8N9R6 151 aa15.2■□□□□ 0.02
RGP1-201ENST00000378078 OR7G3Q8NG95 312 aa15.2■□□□□ 0.02
RGP1-201ENST00000378078 FAM213BQ8TBF2 198 aa15.2■□□□□ 0.02
RGP1-201ENST00000378078 ACOT11Q8WXI4 607 aaPredicted RBP15.2■□□□□ 0.02
RGP1-201ENST00000378078 SPIN2AQ99865 258 aa15.2■□□□□ 0.02
RGP1-201ENST00000378078 SPIN2BQ9BPZ2 258 aa15.2■□□□□ 0.02
RGP1-201ENST00000378078 CCDC32Q9BV29 185 aa15.2■□□□□ 0.02
RGP1-201ENST00000378078 SLC2A11Q9BYW1 496 aa15.2■□□□□ 0.02
RGP1-201ENST00000378078 TUBB1Q9H4B7 451 aa15.2■□□□□ 0.02
RGP1-201ENST00000378078 UNKLQ9H9P5 680 aaKnown RBP15.2■□□□□ 0.02
RGP1-201ENST00000378078 H0YGG7 62 aa15.2■□□□□ 0.02
RGP1-201ENST00000378078 TERTO14746 1132 aaKnown RBP15.2■□□□□ 0.02
RGP1-201ENST00000378078 SLC46A2Q9BY10 475 aa15.2■□□□□ 0.02
RGP1-201ENST00000378078 IL26Q9NPH9 171 aa15.2■□□□□ 0.02
RGP1-201ENST00000378078 A0A096LPE4 126 aa15.19■□□□□ 0.02
RGP1-201ENST00000378078 A0A1W2PPZ6 126 aa15.19■□□□□ 0.02
RGP1-201ENST00000378078 TK1P04183 234 aa15.19■□□□□ 0.02
RGP1-201ENST00000378078 FAM157BP0CG42 384 aa15.19■□□□□ 0.02
RGP1-201ENST00000378078 CT45A6P0DMU7 189 aa15.19■□□□□ 0.02
RGP1-201ENST00000378078 CT45A5P0DMU8 189 aa15.19■□□□□ 0.02
RGP1-201ENST00000378078 CT45A7P0DMV0 189 aa15.19■□□□□ 0.02
RGP1-201ENST00000378078 CT45A8P0DMV1 189 aa15.19■□□□□ 0.02
RGP1-201ENST00000378078 CT45A9P0DMV2 189 aa15.19■□□□□ 0.02
RGP1-201ENST00000378078 ITGB7P26010 798 aa15.19■□□□□ 0.02
RGP1-201ENST00000378078 CT45A2Q5DJT8 189 aa15.19■□□□□ 0.02
RGP1-201ENST00000378078 CT45A1Q5HYN5 189 aa15.19■□□□□ 0.02
RGP1-201ENST00000378078 BLOC1S3Q6QNY0 202 aa15.19■□□□□ 0.02
RGP1-201ENST00000378078 NECAP1Q8NC96 275 aa15.19■□□□□ 0.02
RGP1-201ENST00000378078 CT45A3Q8NHU0 189 aa15.19■□□□□ 0.02
RGP1-201ENST00000378078 NRSN2Q9GZP1 204 aa15.19■□□□□ 0.02
RGP1-201ENST00000378078 TXNL4BQ9NX01 149 aaKnown RBP15.19■□□□□ 0.02
RGP1-201ENST00000378078 FZR1Q9UM11 496 aa15.19■□□□□ 0.02
RGP1-201ENST00000378078 A0A1W2PS29 197 aa15.19■□□□□ 0.02
RGP1-201ENST00000378078 MROH6A6NGR9 719 aa15.19■□□□□ 0.02
RGP1-201ENST00000378078 C1orf105O95561 183 aa15.19■□□□□ 0.02
RGP1-201ENST00000378078 CD1CP29017 333 aa15.19■□□□□ 0.02
RGP1-201ENST00000378078 TIFABQ6ZNK6 161 aa15.19■□□□□ 0.02
RGP1-201ENST00000378078 SLC7A5P1Q8MH63 180 aa15.19■□□□□ 0.02
RGP1-201ENST00000378078 DHRS9Q9BPW9 319 aa15.19■□□□□ 0.02
RGP1-201ENST00000378078 SLC6A20Q9NP91 592 aa15.19■□□□□ 0.02
RGP1-201ENST00000378078 SLC2A8Q9NY64 477 aa15.19■□□□□ 0.02
RGP1-201ENST00000378078 ADAM23O75077 832 aa15.19■□□□□ 0.02
RGP1-201ENST00000378078 PCBD1P61457 104 aa15.19■□□□□ 0.02
RGP1-201ENST00000378078 PODNL1Q6PEZ8 512 aa15.19■□□□□ 0.02
RGP1-201ENST00000378078 Q6ZPB1 254 aaPredicted RBP15.19■□□□□ 0.02
RGP1-201ENST00000378078 OLIG3Q7RTU3 272 aa15.19■□□□□ 0.02
RGP1-201ENST00000378078 ZNF587BE7ETH6 402 aa15.19■□□□□ 0.02
RGP1-201ENST00000378078 OR8G3PP0DMU2 310 aa15.19■□□□□ 0.02
RGP1-201ENST00000378078 RPL7L1Q6DKI1 246 aaKnown RBP15.19■□□□□ 0.02
RGP1-201ENST00000378078 NAA40Q86UY6 237 aa15.19■□□□□ 0.02
RGP1-201ENST00000378078 CPNE4Q96A23 557 aaPredicted RBP15.19■□□□□ 0.02
RGP1-201ENST00000378078 DNMT3BQ9UBC3 853 aaKnown RBP15.19■□□□□ 0.02
RGP1-201ENST00000378078 SLC35A3Q9Y2D2 325 aa15.19■□□□□ 0.02
RGP1-201ENST00000378078 SOX15O60248 233 aa15.19■□□□□ 0.02
RGP1-201ENST00000378078 PRKNO60260 465 aaPredicted RBP15.19■□□□□ 0.02
RGP1-201ENST00000378078 SORDQ00796 357 aa15.19■□□□□ 0.02
RGP1-201ENST00000378078 SYPL1Q16563 259 aa15.19■□□□□ 0.02
RGP1-201ENST00000378078 WBP2NLQ6ICG8 309 aa15.19■□□□□ 0.02
RGP1-201ENST00000378078 C20orf24Q9BUV8 137 aa15.19■□□□□ 0.02
RGP1-201ENST00000378078 TAS2R8Q9NYW2 309 aa15.19■□□□□ 0.02
RGP1-201ENST00000378078 RASD1Q9Y272 281 aa15.19■□□□□ 0.02
RGP1-201ENST00000378078 PIGLQ9Y2B2 252 aa15.19■□□□□ 0.02
RGP1-201ENST00000378078 DUOX1Q9NRD9 1551 aa15.19■□□□□ 0.02
RGP1-201ENST00000378078 TMEM131LA2VDJ0 1609 aa15.19■□□□□ 0.02
RGP1-201ENST00000378078 ANTXRLA6NF34 631 aa15.19■□□□□ 0.02
RGP1-201ENST00000378078 PHF1O43189 567 aaPredicted RBP15.19■□□□□ 0.02
RGP1-201ENST00000378078 ONECUT2O95948 504 aa15.19■□□□□ 0.02
RGP1-201ENST00000378078 HLA-DOBP13765 273 aa15.19■□□□□ 0.02
RGP1-201ENST00000378078 BCKDHBP21953 392 aa15.19■□□□□ 0.02
RGP1-201ENST00000378078 NME2P22392 152 aa15.19■□□□□ 0.02
RGP1-201ENST00000378078 TAZQ16635 292 aa15.19■□□□□ 0.02
RGP1-201ENST00000378078 KCNIP4Q6PIL6 250 aa15.19■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 112.7 ms