RNA–Protein interactions for RNA: ENSMUST00000113440.1

Ccdc88b-201, Transcript of Coiled-coil domain-containing protein 88B, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ccdc88b, Length 4,959 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88b-201ENSMUST00000113440 Slc30a4O35149 430 aa14.51□□□□□ -0.09
Ccdc88b-201ENSMUST00000113440 Hes5P70120 167 aa14.51□□□□□ -0.09
Ccdc88b-201ENSMUST00000113440 Kyat3Q71RI9 455 aa14.51□□□□□ -0.09
Ccdc88b-201ENSMUST00000113440 Gpr119Q7TQP3 335 aa14.51□□□□□ -0.09
Ccdc88b-201ENSMUST00000113440 Olfr1463Q7TQR3 310 aa14.51□□□□□ -0.09
Ccdc88b-201ENSMUST00000113440 Atg4bQ8BGE6 393 aa14.51□□□□□ -0.09
Ccdc88b-201ENSMUST00000113440 Wdr48Q8BH57 676 aa14.51□□□□□ -0.09
Ccdc88b-201ENSMUST00000113440 CcinQ8CDE2 588 aa14.51□□□□□ -0.09
Ccdc88b-201ENSMUST00000113440 Adam4Q8CGQ2 763 aa14.51□□□□□ -0.09
Ccdc88b-201ENSMUST00000113440 Krt33aQ8K0Y2 404 aa14.51□□□□□ -0.09
Ccdc88b-201ENSMUST00000113440 Chchd4Q8VEA4 139 aa14.51□□□□□ -0.09
Ccdc88b-201ENSMUST00000113440 Olfr1316Q8VG12 314 aa14.51□□□□□ -0.09
Ccdc88b-201ENSMUST00000113440 Tinagl1Q99JR5 466 aa14.51□□□□□ -0.09
Ccdc88b-201ENSMUST00000113440 Eif2b1Q99LC8 305 aa14.51□□□□□ -0.09
Ccdc88b-201ENSMUST00000113440 Kti12Q9D1R2 351 aa14.51□□□□□ -0.09
Ccdc88b-201ENSMUST00000113440 Tor3aQ9ER38 385 aa14.51□□□□□ -0.09
Ccdc88b-201ENSMUST00000113440 Mpeg1A1L314 713 aa14.51□□□□□ -0.09
Ccdc88b-201ENSMUST00000113440 Defb43Q30KM9 69 aa14.51□□□□□ -0.09
Ccdc88b-201ENSMUST00000113440 Foxred1Q3TQB2 487 aa14.51□□□□□ -0.09
Ccdc88b-201ENSMUST00000113440 Tram1Q91V04 374 aa14.51□□□□□ -0.09
Ccdc88b-201ENSMUST00000113440 Brinp1Q920P3 760 aa14.51□□□□□ -0.09
Ccdc88b-201ENSMUST00000113440 HadhbQ99JY0 475 aaKnown RBP14.51□□□□□ -0.09
Ccdc88b-201ENSMUST00000113440 Map1bP14873 2464 aaKnown RBP14.51□□□□□ -0.09
Ccdc88b-201ENSMUST00000113440 Vmn1r20K7N778 303 aa14.51□□□□□ -0.09
Ccdc88b-201ENSMUST00000113440 Pebp1P70296 187 aaKnown RBP14.51□□□□□ -0.09
Ccdc88b-201ENSMUST00000113440 Csf2raQ00941 388 aa14.51□□□□□ -0.09
Ccdc88b-201ENSMUST00000113440 Ikzf1Q03267 517 aa14.51□□□□□ -0.09
Ccdc88b-201ENSMUST00000113440 Fahd2Q3TC72 313 aa14.51□□□□□ -0.09
Ccdc88b-201ENSMUST00000113440 CalcrQ60755 533 aa14.51□□□□□ -0.09
Ccdc88b-201ENSMUST00000113440 Agfg2Q80WC7 479 aa14.51□□□□□ -0.09
Ccdc88b-201ENSMUST00000113440 Rxfp3Q8BGE9 472 aa14.51□□□□□ -0.09
Ccdc88b-201ENSMUST00000113440 Agfg1Q8K2K6 561 aa14.51□□□□□ -0.09
Ccdc88b-201ENSMUST00000113440 Rab40bQ8VHP8 278 aa14.51□□□□□ -0.09
Ccdc88b-201ENSMUST00000113440 Zmynd19Q9CQG3 227 aa14.51□□□□□ -0.09
Ccdc88b-201ENSMUST00000113440 Ier3ip1Q9CR20 82 aa14.51□□□□□ -0.09
Ccdc88b-201ENSMUST00000113440 Exosc5Q9CRA8 235 aa14.51□□□□□ -0.09
Ccdc88b-201ENSMUST00000113440 Mgat4cQ9D306 478 aa14.51□□□□□ -0.09
Ccdc88b-201ENSMUST00000113440 CalyQ9DCA7 226 aa14.51□□□□□ -0.09
Ccdc88b-201ENSMUST00000113440 Acox3Q9EPL9 700 aa14.51□□□□□ -0.09
Ccdc88b-201ENSMUST00000113440 Olfr543E9PWI5 336 aa14.5□□□□□ -0.09
Ccdc88b-201ENSMUST00000113440 ChrndP02716 520 aa14.5□□□□□ -0.09
Ccdc88b-201ENSMUST00000113440 Igfbp1P47876 272 aa14.5□□□□□ -0.09
Ccdc88b-201ENSMUST00000113440 Olfr298Q7TS06 332 aa14.5□□□□□ -0.09
Ccdc88b-201ENSMUST00000113440 Olfr1217Q8VGG1 304 aa14.5□□□□□ -0.09
Ccdc88b-201ENSMUST00000113440 Slc27a4Q91VE0 643 aaKnown RBP14.5□□□□□ -0.09
Ccdc88b-201ENSMUST00000113440 RgccQ9DBX1 137 aa14.5□□□□□ -0.09
Ccdc88b-201ENSMUST00000113440 Upk3aQ9JKX8 287 aa14.5□□□□□ -0.09
Ccdc88b-201ENSMUST00000113440 Srd5a3Q9WUP4 330 aa14.5□□□□□ -0.09
Ccdc88b-201ENSMUST00000113440 RbmxQ9WV02 391 aaKnown RBP14.5□□□□□ -0.09
Ccdc88b-201ENSMUST00000113440 Esp18A8R0V1 91 aa14.5□□□□□ -0.09
Ccdc88b-201ENSMUST00000113440 Rab11fip2G3XA57 512 aa14.5□□□□□ -0.09
Ccdc88b-201ENSMUST00000113440 Rpl7P14148 270 aaKnown RBP14.5□□□□□ -0.09
Ccdc88b-201ENSMUST00000113440 Klk1P15947 261 aa14.5□□□□□ -0.09
Ccdc88b-201ENSMUST00000113440 Pou4f3Q63955 338 aa14.5□□□□□ -0.09
Ccdc88b-201ENSMUST00000113440 Olfr270Q7TS19 314 aa14.5□□□□□ -0.09
Ccdc88b-201ENSMUST00000113440 Prkd2Q8BZ03 875 aa14.5□□□□□ -0.09
Ccdc88b-201ENSMUST00000113440 Slc25a21Q8BZ09 298 aa14.5□□□□□ -0.09
Ccdc88b-201ENSMUST00000113440 Cep41Q99NF3 373 aa14.5□□□□□ -0.09
Ccdc88b-201ENSMUST00000113440 Acox1Q9R0H0 661 aaKnown RBP14.5□□□□□ -0.09
Ccdc88b-201ENSMUST00000113440 Olfr634-ps1A0A1B0GRN7 318 aa14.5□□□□□ -0.09
Ccdc88b-201ENSMUST00000113440 Vmn2r106E9PY92 862 aa14.5□□□□□ -0.09
Ccdc88b-201ENSMUST00000113440 Gm3633L7N233 213 aa14.5□□□□□ -0.09
Ccdc88b-201ENSMUST00000113440 Gm9611L7N476 213 aa14.5□□□□□ -0.09
Ccdc88b-201ENSMUST00000113440 Kcnj1O88335 372 aa14.5□□□□□ -0.09
Ccdc88b-201ENSMUST00000113440 Cntn1P12960 1020 aa14.5□□□□□ -0.09
Ccdc88b-201ENSMUST00000113440 AhrP30561 848 aa14.5□□□□□ -0.09
Ccdc88b-201ENSMUST00000113440 Slc22a18Q78KK3 406 aa14.5□□□□□ -0.09
Ccdc88b-201ENSMUST00000113440 Trim46Q7TNM2 759 aa14.5□□□□□ -0.09
Ccdc88b-201ENSMUST00000113440 Zfp790Q80ZX2 779 aa14.5□□□□□ -0.09
Ccdc88b-201ENSMUST00000113440 Zadh2Q8BGC4 377 aa14.5□□□□□ -0.09
Ccdc88b-201ENSMUST00000113440 LdahQ8BVA5 326 aa14.5□□□□□ -0.09
Ccdc88b-201ENSMUST00000113440 Ctxn1Q8K129 82 aa14.5□□□□□ -0.09
Ccdc88b-201ENSMUST00000113440 Zdhhc5Q8VDZ4 715 aa14.5□□□□□ -0.09
Ccdc88b-201ENSMUST00000113440 Gdpd3Q99LY2 330 aa14.5□□□□□ -0.09
Ccdc88b-201ENSMUST00000113440 NaaaQ9D7V9 362 aa14.5□□□□□ -0.09
Ccdc88b-201ENSMUST00000113440 Spaca1Q9DA48 305 aa14.5□□□□□ -0.09
Ccdc88b-201ENSMUST00000113440 Slc34a2Q9DBP0 697 aa14.5□□□□□ -0.09
Ccdc88b-201ENSMUST00000113440 AspdhQ9DCQ2 287 aa14.5□□□□□ -0.09
Ccdc88b-201ENSMUST00000113440 Raet1dQ9JI58 249 aa14.5□□□□□ -0.09
Ccdc88b-201ENSMUST00000113440 Thsd1Q9JM61 851 aa14.5□□□□□ -0.09
Ccdc88b-201ENSMUST00000113440 Slc39a1Q9QZ03 324 aa14.5□□□□□ -0.09
Ccdc88b-201ENSMUST00000113440 Spo11Q9WTK8 396 aa14.5□□□□□ -0.09
Ccdc88b-201ENSMUST00000113440 Tdrd6P61407 2134 aa14.5□□□□□ -0.09
Ccdc88b-201ENSMUST00000113440 Hpse2B2RY83 592 aa14.5□□□□□ -0.09
Ccdc88b-201ENSMUST00000113440 Zfp871G5E905 615 aa14.5□□□□□ -0.09
Ccdc88b-201ENSMUST00000113440 GcgP55095 180 aa14.5□□□□□ -0.09
Ccdc88b-201ENSMUST00000113440 Meig1Q61845 88 aa14.5□□□□□ -0.09
Ccdc88b-201ENSMUST00000113440 Rpl35Q6ZWV7 123 aaKnown RBP14.5□□□□□ -0.09
Ccdc88b-201ENSMUST00000113440 Fbxo34Q80XI1 695 aa14.5□□□□□ -0.09
Ccdc88b-201ENSMUST00000113440 H2-M10.5Q85ZW7 330 aa14.5□□□□□ -0.09
Ccdc88b-201ENSMUST00000113440 Olfr135Q8VEY4 312 aa14.5□□□□□ -0.09
Ccdc88b-201ENSMUST00000113440 Olfr1423Q8VFV0 310 aa14.5□□□□□ -0.09
Ccdc88b-201ENSMUST00000113440 Mrgprb5Q91ZB9 322 aa14.5□□□□□ -0.09
Ccdc88b-201ENSMUST00000113440 Pdzk1ip1Q9CQH0 114 aa14.5□□□□□ -0.09
Ccdc88b-201ENSMUST00000113440 March7Q9WV66 693 aa14.5□□□□□ -0.09
Ccdc88b-201ENSMUST00000113440 Ly75Q60767 1723 aa14.49□□□□□ -0.09
Ccdc88b-201ENSMUST00000113440 Tmem201A2A8U2 664 aa14.49□□□□□ -0.09
Ccdc88b-201ENSMUST00000113440 L3mbtl4B1B1A0 621 aa14.49□□□□□ -0.09
Ccdc88b-201ENSMUST00000113440 Clec10aP49300 304 aa14.49□□□□□ -0.09
Ccdc88b-201ENSMUST00000113440 PitpnbP53811 271 aa14.49□□□□□ -0.09
Retrieved 100 of 22,080 RNA–protein pairs in 61 ms