RNA–Protein interactions for RNA: YMR235C

RNA1, Transcript of GTPase activating protein (GAP) for Gsp1p, yeast

Gene RNA1, Length 1,224 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RNA1	YMR235C	RAD18	P10862	487 aa		4.99	□□□□□ -1.61
RNA1	YMR235C	SFL1	P20134	766 aa		4.99	□□□□□ -1.61
RNA1	YMR235C	AAR2	P32357	355 aa	Predicted RBP	4.99	□□□□□ -1.61
RNA1	YMR235C	EXO84	P38261	753 aa		4.99	□□□□□ -1.61
RNA1	YMR235C	OAF1	P39720	1047 aa	Predicted RBP	4.99	□□□□□ -1.61
RNA1	YMR235C	SAH1	P39954	449 aa	Known RBP	4.99	□□□□□ -1.61
RNA1	YMR235C	BUL2	Q03758	920 aa	Known RBP	4.99	□□□□□ -1.61
RNA1	YMR235C	YTM1	Q12024	460 aa	Predicted RBP	4.99	□□□□□ -1.61
RNA1	YMR235C	APL1	P27351	700 aa		4.98	□□□□□ -1.61
RNA1	YMR235C	PRP19	P32523	503 aa	Known RBP	4.98	□□□□□ -1.61
RNA1	YMR235C	YKL133C	P36066	463 aa		4.98	□□□□□ -1.61
RNA1	YMR235C	CKB2	P38930	258 aa		4.98	□□□□□ -1.61
RNA1	YMR235C	SAP185	P40856	1058 aa		4.98	□□□□□ -1.61
RNA1	YMR235C	GZF3	P42944	551 aa	Known RBP	4.98	□□□□□ -1.61
RNA1	YMR235C	MAP1	Q01662	387 aa	Known RBP RIP-Chip data	4.98	□□□□□ -1.61	not detected
RNA1	YMR235C	YML131W	Q03102	365 aa		4.98	□□□□□ -1.61
RNA1	YMR235C	RXT3	Q07458	294 aa		4.98	□□□□□ -1.61
RNA1	YMR235C	YPR071W	Q12346	211 aa		4.98	□□□□□ -1.61
RNA1	YMR235C	RIB2	Q12362	591 aa	Known RBP	4.98	□□□□□ -1.61
RNA1	YMR235C	ERP4	Q12450	207 aa		4.98	□□□□□ -1.61
RNA1	YMR235C	PHR1	P05066	565 aa	Known RBP RIP-Chip data	4.97	□□□□□ -1.61	not detected
RNA1	YMR235C	KCC4	P25389	1037 aa		4.97	□□□□□ -1.61
RNA1	YMR235C	PCM1	P38628	557 aa	Known RBP	4.97	□□□□□ -1.61
RNA1	YMR235C	GPP2	P40106	250 aa	Known RBP	4.97	□□□□□ -1.61
RNA1	YMR235C	SNP1	Q00916	300 aa	Predicted RBP	4.97	□□□□□ -1.61
RNA1	YMR235C	SIZ1	Q04195	904 aa		4.97	□□□□□ -1.61
RNA1	YMR235C	LCD1	Q04377	747 aa		4.97	□□□□□ -1.61
RNA1	YMR235C	PHM6	Q05637	104 aa		4.97	□□□□□ -1.61
RNA1	YMR235C	ACK1	Q07622	623 aa	Predicted RBP	4.97	□□□□□ -1.61
RNA1	YMR235C	GUD1	Q07729	489 aa		4.97	□□□□□ -1.61
RNA1	YMR235C	VTS1	Q08831	523 aa	Known RBP RIP-Chip data	4.97	□□□□□ -1.61	RIP-Chip
RNA1	YMR235C	RTP1	Q12751	981 aa		4.97	□□□□□ -1.61
RNA1	YMR235C	TUB2	P02557	457 aa	Known RBP	4.96	□□□□□ -1.62
RNA1	YMR235C	CDC20	P26309	610 aa		4.96	□□□□□ -1.62
RNA1	YMR235C	PPH3	P32345	308 aa		4.96	□□□□□ -1.62
RNA1	YMR235C	STO1	P34160	861 aa	Known RBP	4.96	□□□□□ -1.62
RNA1	YMR235C	CAF16	P43569	289 aa		4.96	□□□□□ -1.62
RNA1	YMR235C	ATP25	Q03153	612 aa		4.96	□□□□□ -1.62
RNA1	YMR235C	DUS3	Q06053	668 aa	Known RBP	4.96	□□□□□ -1.62
RNA1	YMR235C	GPB1	Q08886	897 aa		4.96	□□□□□ -1.62
RNA1	YMR235C	ACM1	Q08981	209 aa		4.96	□□□□□ -1.62
RNA1	YMR235C	RPL11A	P0C0W9	174 aa	Known RBP	4.95	□□□□□ -1.62
RNA1	YMR235C	APA1	P16550	321 aa	Known RBP	4.95	□□□□□ -1.62
RNA1	YMR235C	ACE2	P21192	770 aa		4.95	□□□□□ -1.62
RNA1	YMR235C	CDC12	P32468	407 aa	Known RBP	4.95	□□□□□ -1.62
RNA1	YMR235C	AFR1	P33304	620 aa		4.95	□□□□□ -1.62
RNA1	YMR235C	EMC3	P36039	253 aa		4.95	□□□□□ -1.62
RNA1	YMR235C	UGA2	P38067	497 aa		4.95	□□□□□ -1.62
RNA1	YMR235C	YHL041W	P38730	149 aa		4.95	□□□□□ -1.62
RNA1	YMR235C	YAP1801	P38856	637 aa		4.95	□□□□□ -1.62
RNA1	YMR235C	PNT1	P38969	423 aa		4.95	□□□□□ -1.62
RNA1	YMR235C	GYP8	P43570	497 aa		4.95	□□□□□ -1.62
RNA1	YMR235C	MNN11	P46985	422 aa	Known RBP	4.95	□□□□□ -1.62
RNA1	YMR235C	TAN1	P53072	289 aa	Predicted RBP	4.95	□□□□□ -1.62
RNA1	YMR235C	YGR283C	P53336	341 aa	Predicted RBP	4.95	□□□□□ -1.62
RNA1	YMR235C	SPP382	Q06411	708 aa	Predicted RBP	4.95	□□□□□ -1.62
RNA1	YMR235C	RMP1	Q12530	201 aa		4.95	□□□□□ -1.62
RNA1	YMR235C	RPL11B	Q3E757	174 aa	Predicted RBP	4.95	□□□□□ -1.62
RNA1	YMR235C	CDC6	P09119	513 aa		4.94	□□□□□ -1.62
RNA1	YMR235C	HEM12	P32347	362 aa	Predicted RBP	4.94	□□□□□ -1.62
RNA1	YMR235C	YRO2	P38079	344 aa		4.94	□□□□□ -1.62
RNA1	YMR235C	MXR1	P40029	184 aa		4.94	□□□□□ -1.62
RNA1	YMR235C	TOK1	P40310	691 aa		4.94	□□□□□ -1.62
RNA1	YMR235C	RRT14	P40470	206 aa		4.94	□□□□□ -1.62
RNA1	YMR235C	REH1	Q06709	432 aa		4.94	□□□□□ -1.62
RNA1	YMR235C	ADE8	P04161	214 aa		4.93	□□□□□ -1.62
RNA1	YMR235C	HMG1	P12683	1054 aa		4.93	□□□□□ -1.62
RNA1	YMR235C	STE11	P23561	717 aa		4.93	□□□□□ -1.62
RNA1	YMR235C	DBF20	P32328	564 aa		4.93	□□□□□ -1.62
RNA1	YMR235C	HOG1	P32485	435 aa		4.93	□□□□□ -1.62
RNA1	YMR235C	TOA1	P32773	286 aa		4.93	□□□□□ -1.62
RNA1	YMR235C	DID4	P36108	232 aa		4.93	□□□□□ -1.62
RNA1	YMR235C	JNM1	P36224	373 aa		4.93	□□□□□ -1.62
RNA1	YMR235C	KTR4	P38131	464 aa		4.93	□□□□□ -1.62
RNA1	YMR235C	ERT1	P38140	529 aa		4.93	□□□□□ -1.62
RNA1	YMR235C	ACA1	P39970	489 aa		4.93	□□□□□ -1.62
RNA1	YMR235C	EMP65	P40085	556 aa		4.93	□□□□□ -1.62
RNA1	YMR235C	SRB7	P47822	140 aa		4.93	□□□□□ -1.62
RNA1	YMR235C	UBA2	P52488	636 aa		4.93	□□□□□ -1.62
RNA1	YMR235C	MSC2	Q03455	724 aa		4.93	□□□□□ -1.62
RNA1	YMR235C	ATG33	Q06485	197 aa		4.93	□□□□□ -1.62
RNA1	YMR235C	RSC3	Q06639	885 aa		4.93	□□□□□ -1.62
RNA1	YMR235C	SSP2	Q08646	371 aa		4.93	□□□□□ -1.62
RNA1	YMR235C	BI4	P03879	638 aa		4.92	□□□□□ -1.62
RNA1	YMR235C	DBP2	P24783	546 aa	Known RBP	4.92	□□□□□ -1.62
RNA1	YMR235C	GFD2	P25370	566 aa	Known RBP	4.92	□□□□□ -1.62
RNA1	YMR235C	DAL3	P32459	195 aa		4.92	□□□□□ -1.62
RNA1	YMR235C	SLA2	P33338	968 aa		4.92	□□□□□ -1.62
RNA1	YMR235C	TRM2	P33753	639 aa		4.92	□□□□□ -1.62
RNA1	YMR235C	LST4	P34239	828 aa		4.92	□□□□□ -1.62
RNA1	YMR235C	BLI1	P35727	113 aa		4.92	□□□□□ -1.62
RNA1	YMR235C	MCD4	P36051	919 aa		4.92	□□□□□ -1.62
RNA1	YMR235C	BIT2	P38346	545 aa		4.92	□□□□□ -1.62
RNA1	YMR235C	CCT5	P40413	562 aa	Known RBP	4.92	□□□□□ -1.62
RNA1	YMR235C	YGR153W	P48238	217 aa		4.92	□□□□□ -1.62
RNA1	YMR235C	MNN10	P50108	393 aa	Known RBP	4.92	□□□□□ -1.62
RNA1	YMR235C	GTF1	P53260	183 aa	Predicted RBP	4.92	□□□□□ -1.62
RNA1	YMR235C	DAM1	P53267	343 aa		4.92	□□□□□ -1.62
RNA1	YMR235C	VPS62	P53285	467 aa		4.92	□□□□□ -1.62
RNA1	YMR235C	TMA10	Q06177	86 aa		4.92	□□□□□ -1.62

Retrieved 100 of 5,963 RNA–protein pairs in 32.9 ms