RNA–Protein interactions for RNA: ENST00000641247.1

PHGDH-212, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 710 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-212ENST00000641247 GBA2Q9HCG7 927 aaPredicted RBP13.02□□□□□ -0.33
PHGDH-212ENST00000641247 TIMELESSQ9UNS1 1208 aa13.02□□□□□ -0.33
PHGDH-212ENST00000641247 ABCC4O15439 1325 aa13.02□□□□□ -0.33
PHGDH-212ENST00000641247 MAP3K15Q6ZN16 1313 aa13.02□□□□□ -0.33
PHGDH-212ENST00000641247 ZNF157P51786 506 aaPredicted RBP13.01□□□□□ -0.33
PHGDH-212ENST00000641247 KCNQ5Q9NR82 932 aa13.01□□□□□ -0.33
PHGDH-212ENST00000641247 RRP7AQ9Y3A4 280 aaKnown RBP13.01□□□□□ -0.33
PHGDH-212ENST00000641247 TBC1D10BQ4KMP7 808 aaPredicted RBP13□□□□□ -0.33
PHGDH-212ENST00000641247 SLC10A5Q5PT55 438 aa13□□□□□ -0.33
PHGDH-212ENST00000641247 SP8Q8IXZ3 490 aa13□□□□□ -0.33
PHGDH-212ENST00000641247 CCDC102AQ96A19 550 aa13□□□□□ -0.33
PHGDH-212ENST00000641247 ASTN2O75129 1339 aaPredicted RBP12.99□□□□□ -0.33
PHGDH-212ENST00000641247 CDHR2Q9BYE9 1310 aa12.99□□□□□ -0.33
PHGDH-212ENST00000641247 SLC10A3P09131 477 aa12.99□□□□□ -0.33
PHGDH-212ENST00000641247 MYL6BP14649 208 aa12.99□□□□□ -0.33
PHGDH-212ENST00000641247 RBM26Q5T8P6 1007 aaKnown RBP12.99□□□□□ -0.33
PHGDH-212ENST00000641247 DPP8Q6V1X1 898 aaPredicted RBP12.99□□□□□ -0.33
PHGDH-212ENST00000641247 KRT26Q7Z3Y9 468 aa12.99□□□□□ -0.33
PHGDH-212ENST00000641247 MPNDQ8N594 471 aa12.99□□□□□ -0.33
PHGDH-212ENST00000641247 IBTKQ9P2D0 1353 aaPredicted RBP12.98□□□□□ -0.33
PHGDH-212ENST00000641247 H7C1D1 291 aa12.98□□□□□ -0.33
PHGDH-212ENST00000641247 PSMD14O00487 310 aa12.98□□□□□ -0.33
PHGDH-212ENST00000641247 TNIP1Q15025 636 aa12.98□□□□□ -0.33
PHGDH-212ENST00000641247 HABP4Q5JVS0 413 aaKnown RBP12.98□□□□□ -0.33
PHGDH-212ENST00000641247 C2orf69Q8N8R5 385 aa12.98□□□□□ -0.33
PHGDH-212ENST00000641247 SUPT20HQ8NEM7 779 aa12.98□□□□□ -0.33
PHGDH-212ENST00000641247 NLRP3Q96P20 1036 aa12.98□□□□□ -0.33
PHGDH-212ENST00000641247 TBC1D8O95759 1140 aa12.97□□□□□ -0.33
PHGDH-212ENST00000641247 TAF7Q15545 349 aaPredicted RBP12.97□□□□□ -0.33
PHGDH-212ENST00000641247 LRP10Q7Z4F1 713 aa12.97□□□□□ -0.33
PHGDH-212ENST00000641247 ZNF296Q8WUU4 475 aaPredicted RBP12.97□□□□□ -0.33
PHGDH-212ENST00000641247 DPF2Q92785 391 aa12.97□□□□□ -0.33
PHGDH-212ENST00000641247 BBOX1O75936 387 aa12.96□□□□□ -0.33
PHGDH-212ENST00000641247 GIGYF2Q6Y7W6 1299 aaKnown RBP12.96□□□□□ -0.33
PHGDH-212ENST00000641247 RASAL3Q86YV0 1011 aa12.96□□□□□ -0.33
PHGDH-212ENST00000641247 RTF1Q92541 710 aaKnown RBP12.96□□□□□ -0.33
PHGDH-212ENST00000641247 THUMPD2Q9BTF0 503 aaKnown RBP12.96□□□□□ -0.33
PHGDH-212ENST00000641247 DBNDD1Q9H9R9 158 aa12.96□□□□□ -0.33
PHGDH-212ENST00000641247 HCLS1P14317 486 aaPredicted RBP12.95□□□□□ -0.34
PHGDH-212ENST00000641247 EIF4A1P60842 406 aaKnown RBP12.95□□□□□ -0.34
PHGDH-212ENST00000641247 KIF6Q6ZMV9 814 aa12.95□□□□□ -0.34
PHGDH-212ENST00000641247 MOB2Q70IA6 237 aa12.95□□□□□ -0.34
PHGDH-212ENST00000641247 ZNF428Q96B54 188 aa12.95□□□□□ -0.34
PHGDH-212ENST00000641247 RTL9Q8NET4 1388 aa12.94□□□□□ -0.34
PHGDH-212ENST00000641247 RIMBP2O15034 1052 aa12.94□□□□□ -0.34
PHGDH-212ENST00000641247 PDIA6Q15084 440 aa12.94□□□□□ -0.34
PHGDH-212ENST00000641247 PPP1R42Q7Z4L9 355 aa12.94□□□□□ -0.34
PHGDH-212ENST00000641247 DCPSQ96C86 337 aaKnown RBP12.94□□□□□ -0.34
PHGDH-212ENST00000641247 UTP14AQ9BVJ6 771 aaKnown RBP12.94□□□□□ -0.34
PHGDH-212ENST00000641247 TMX4Q9H1E5 349 aaPredicted RBP12.94□□□□□ -0.34
PHGDH-212ENST00000641247 R3HDMLQ9H3Y0 253 aa12.94□□□□□ -0.34
PHGDH-212ENST00000641247 SCAF8Q9UPN6 1271 aaKnown RBP12.94□□□□□ -0.34
PHGDH-212ENST00000641247 DUOX1Q9NRD9 1551 aa12.94□□□□□ -0.34
PHGDH-212ENST00000641247 ANXA1P04083 346 aa12.93□□□□□ -0.34
PHGDH-212ENST00000641247 DOK7Q18PE1 504 aa12.93□□□□□ -0.34
PHGDH-212ENST00000641247 CDCA5Q96FF9 252 aa12.93□□□□□ -0.34
PHGDH-212ENST00000641247 POLLQ9UGP5 575 aa12.93□□□□□ -0.34
PHGDH-212ENST00000641247 HTATSF1O43719 755 aaKnown RBP12.92□□□□□ -0.34
PHGDH-212ENST00000641247 GRAPQ13588 217 aa12.92□□□□□ -0.34
PHGDH-212ENST00000641247 PROSER3Q2NL68 480 aa12.92□□□□□ -0.34
PHGDH-212ENST00000641247 PARP10Q53GL7 1025 aa12.92□□□□□ -0.34
PHGDH-212ENST00000641247 GRAPLQ8TC17 118 aaPredicted RBP12.92□□□□□ -0.34
PHGDH-212ENST00000641247 GGA3Q9NZ52 723 aa12.92□□□□□ -0.34
PHGDH-212ENST00000641247 HDAC9Q9UKV0 1011 aa12.92□□□□□ -0.34
PHGDH-212ENST00000641247 POTEFA5A3E0 1075 aa12.91□□□□□ -0.34
PHGDH-212ENST00000641247 GPR25O00155 361 aa12.91□□□□□ -0.34
PHGDH-212ENST00000641247 U2AF1L5P0DN76 240 aaPredicted RBP12.91□□□□□ -0.34
PHGDH-212ENST00000641247 FXR1P51114 621 aaKnown RBP eCLIP12.91□□□□□ -0.346e-7■■■■□ 19.4
PHGDH-212ENST00000641247 U2AF1Q01081 240 aaKnown RBP eCLIP12.91□□□□□ -0.34
PHGDH-212ENST00000641247 PKN2Q16513 984 aaKnown RBP12.91□□□□□ -0.34
PHGDH-212ENST00000641247 WASHC4Q2M389 1173 aa12.91□□□□□ -0.34
PHGDH-212ENST00000641247 KIF4BQ2VIQ3 1234 aa12.91□□□□□ -0.34
PHGDH-212ENST00000641247 CELF1Q92879 486 aaKnown RBP12.91□□□□□ -0.34
PHGDH-212ENST00000641247 NUP98P52948 1817 aa12.9□□□□□ -0.34
PHGDH-212ENST00000641247 GPSM2P81274 684 aa12.9□□□□□ -0.34
PHGDH-212ENST00000641247 ANGEL2Q5VTE6 544 aaKnown RBP12.9□□□□□ -0.34
PHGDH-212ENST00000641247 PRAMEF18Q5VWM3 479 aa12.9□□□□□ -0.34
PHGDH-212ENST00000641247 FBXO46Q6PJ61 603 aaPredicted RBP12.9□□□□□ -0.34
PHGDH-212ENST00000641247 DDX46Q7L014 1031 aaKnown RBP12.9□□□□□ -0.34
PHGDH-212ENST00000641247 NLRP10Q86W26 655 aa12.9□□□□□ -0.34
PHGDH-212ENST00000641247 GCC1Q96CN9 775 aa12.9□□□□□ -0.34
PHGDH-212ENST00000641247 NSFL1CQ9UNZ2 370 aaKnown RBP12.9□□□□□ -0.34
PHGDH-212ENST00000641247 COL4A1P02462 1669 aa12.89□□□□□ -0.35
PHGDH-212ENST00000641247 UBE2Q2LH0YL09 131 aa12.89□□□□□ -0.35
PHGDH-212ENST00000641247 ECE2O60344 883 aa12.89□□□□□ -0.35
PHGDH-212ENST00000641247 SCARF1Q14162 830 aa12.89□□□□□ -0.35
PHGDH-212ENST00000641247 SULF1Q8IWU6 871 aa12.89□□□□□ -0.35
PHGDH-212ENST00000641247 VIL1P09327 827 aaKnown RBP12.88□□□□□ -0.35
PHGDH-212ENST00000641247 RPS12P25398 132 aaKnown RBP12.88□□□□□ -0.35
PHGDH-212ENST00000641247 TM4SF4P48230 202 aa12.88□□□□□ -0.35
PHGDH-212ENST00000641247 MKRN3Q13064 507 aaKnown RBP12.88□□□□□ -0.35
PHGDH-212ENST00000641247 REM2Q8IYK8 340 aaPredicted RBP12.88□□□□□ -0.35
PHGDH-212ENST00000641247 C6orf229H3BNL8 230 aa12.87□□□□□ -0.35
PHGDH-212ENST00000641247 EIF2S2P20042 333 aaKnown RBP12.87□□□□□ -0.35
PHGDH-212ENST00000641247 TRMT112Q9UI30 125 aaKnown RBP12.87□□□□□ -0.35
PHGDH-212ENST00000641247 ZNF280AP59817 542 aaPredicted RBP12.86□□□□□ -0.35
PHGDH-212ENST00000641247 COPS6Q7L5N1 327 aa12.86□□□□□ -0.35
PHGDH-212ENST00000641247 TBC1D16Q8TBP0 767 aa12.86□□□□□ -0.35
PHGDH-212ENST00000641247 AIMP1Q12904 312 aaKnown RBP12.85□□□□□ -0.35
PHGDH-212ENST00000641247 TCIRG1Q13488 830 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms