RNA–Protein interactions for RNA: ENST00000640939.1

GRAMD1B-217, Transcript of GRAM domain containing 1B, humanhuman

TSL 5 BASIC

Gene GRAMD1B, Length 1,212 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GRAMD1B-217ENST00000640939 DNAAF4Q8WXU2 420 aa28.73■■■□□ 2.19
GRAMD1B-217ENST00000640939 IARSP41252 1262 aaKnown RBP28.72■■■□□ 2.19
GRAMD1B-217ENST00000640939 TMX4Q9H1E5 349 aaPredicted RBP28.72■■■□□ 2.19
GRAMD1B-217ENST00000640939 COL4A1P02462 1669 aa28.71■■■□□ 2.19
GRAMD1B-217ENST00000640939 F6X3S4 739 aa28.71■■■□□ 2.19
GRAMD1B-217ENST00000640939 HSP90B1P14625 803 aaKnown RBP28.7■■■□□ 2.18
GRAMD1B-217ENST00000640939 GRIPAP1Q4V328 841 aa28.7■■■□□ 2.18
GRAMD1B-217ENST00000640939 SP8Q8IXZ3 490 aa28.7■■■□□ 2.18
GRAMD1B-217ENST00000640939 CELF1Q92879 486 aaKnown RBP28.7■■■□□ 2.18
GRAMD1B-217ENST00000640939 PDE8AO60658 829 aa28.69■■■□□ 2.18
GRAMD1B-217ENST00000640939 DPY19L2Q6NUT2 758 aa28.69■■■□□ 2.18
GRAMD1B-217ENST00000640939 CCDC85AQ96PX6 553 aaPredicted RBP28.69■■■□□ 2.18
GRAMD1B-217ENST00000640939 CDHR2Q9BYE9 1310 aa28.69■■■□□ 2.18
GRAMD1B-217ENST00000640939 GCKRQ14397 625 aa28.67■■■□□ 2.18
GRAMD1B-217ENST00000640939 SEC31BQ9NQW1 1179 aa28.67■■■□□ 2.18
GRAMD1B-217ENST00000640939 UBE3BQ7Z3V4 1068 aa28.66■■■□□ 2.18
GRAMD1B-217ENST00000640939 TRMT2AQ8IZ69 625 aaKnown RBP28.66■■■□□ 2.18
GRAMD1B-217ENST00000640939 LINS1Q8NG48 757 aa28.66■■■□□ 2.18
GRAMD1B-217ENST00000640939 COL4A5P29400 1685 aa28.66■■■□□ 2.18
GRAMD1B-217ENST00000640939 H7C1W4 665 aa28.65■■■□□ 2.18
GRAMD1B-217ENST00000640939 DDNO94850 711 aaPredicted RBP28.65■■■□□ 2.18
GRAMD1B-217ENST00000640939 CCDC152Q4G0S7 254 aa28.65■■■□□ 2.18
GRAMD1B-217ENST00000640939 DPP8Q6V1X1 898 aaPredicted RBP28.65■■■□□ 2.18
GRAMD1B-217ENST00000640939 C16orf71Q8IYS4 520 aaPredicted RBP28.65■■■□□ 2.18
GRAMD1B-217ENST00000640939 MPNDQ8N594 471 aa28.65■■■□□ 2.18
GRAMD1B-217ENST00000640939 ZNF541Q9H0D2 1346 aa28.65■■■□□ 2.18
GRAMD1B-217ENST00000640939 TMC4Q7Z404 712 aa28.64■■■□□ 2.18
GRAMD1B-217ENST00000640939 LARGE2Q8N3Y3 721 aa28.64■■■□□ 2.18
GRAMD1B-217ENST00000640939 MRPL50Q8N5N7 158 aaKnown RBP28.64■■■□□ 2.18
GRAMD1B-217ENST00000640939 LRRC37AA6NMS7 1700 aa28.63■■■□□ 2.17
GRAMD1B-217ENST00000640939 WDR90Q96KV7 1748 aa28.63■■■□□ 2.17
GRAMD1B-217ENST00000640939 TOMM70O94826 608 aa28.63■■■□□ 2.17
GRAMD1B-217ENST00000640939 CTSWP56202 376 aa28.63■■■□□ 2.17
GRAMD1B-217ENST00000640939 RPS8P62241 208 aaKnown RBP28.63■■■□□ 2.17
GRAMD1B-217ENST00000640939 JDP2Q8WYK2 163 aa28.63■■■□□ 2.17
GRAMD1B-217ENST00000640939 VEGFAP15692 232 aaPredicted RBP28.62■■■□□ 2.17
GRAMD1B-217ENST00000640939 BEND3Q5T5X7 828 aa28.62■■■□□ 2.17
GRAMD1B-217ENST00000640939 SSH1Q8WYL5 1049 aa28.62■■■□□ 2.17
GRAMD1B-217ENST00000640939 MYH3P11055 1940 aa28.61■■■□□ 2.17
GRAMD1B-217ENST00000640939 POTECB2RU33 542 aa28.61■■■□□ 2.17
GRAMD1B-217ENST00000640939 PPIP5K2O43314 1243 aa28.61■■■□□ 2.17
GRAMD1B-217ENST00000640939 AOC3Q16853 763 aa28.61■■■□□ 2.17
GRAMD1B-217ENST00000640939 BCL2L13Q9BXK5 485 aa28.61■■■□□ 2.17
GRAMD1B-217ENST00000640939 RTFDC1Q9BY42 306 aaPredicted RBP28.61■■■□□ 2.17
GRAMD1B-217ENST00000640939 FZD9O00144 591 aa28.6■■■□□ 2.17
GRAMD1B-217ENST00000640939 SLC4A10Q6U841 1118 aa28.6■■■□□ 2.17
GRAMD1B-217ENST00000640939 SUPT20HQ8NEM7 779 aa28.6■■■□□ 2.17
GRAMD1B-217ENST00000640939 TTLL11Q8NHH1 800 aa28.6■■■□□ 2.17
GRAMD1B-217ENST00000640939 CASP7P55210 303 aa28.59■■■□□ 2.17
GRAMD1B-217ENST00000640939 DUOX1Q9NRD9 1551 aa28.58■■■□□ 2.17
GRAMD1B-217ENST00000640939 GPSM2P81274 684 aa28.58■■■□□ 2.17
GRAMD1B-217ENST00000640939 NSFL1CQ9UNZ2 370 aaKnown RBP28.58■■■□□ 2.17
GRAMD1B-217ENST00000640939 NIM1KQ8IY84 436 aa28.57■■■□□ 2.16
GRAMD1B-217ENST00000640939 RBM46Q8TBY0 533 aaKnown RBP28.57■■■□□ 2.16
GRAMD1B-217ENST00000640939 GREM2Q9H772 168 aa28.57■■■□□ 2.16
GRAMD1B-217ENST00000640939 HNRNPUQ00839 825 aaKnown RBP eCLIP28.56■■■□□ 2.16
GRAMD1B-217ENST00000640939 PLA2G12BQ9BX93 195 aa28.56■■■□□ 2.16
GRAMD1B-217ENST00000640939 EIF6P56537 245 aaKnown RBP28.55■■■□□ 2.16
GRAMD1B-217ENST00000640939 ANKRD18AQ8IVF6 992 aa28.55■■■□□ 2.16
GRAMD1B-217ENST00000640939 VPS33BQ9H267 617 aa28.55■■■□□ 2.16
GRAMD1B-217ENST00000640939 ALDH1L2Q3SY69 923 aa28.54■■■□□ 2.16
GRAMD1B-217ENST00000640939 SRCIN1Q9C0H9 1055 aa28.54■■■□□ 2.16
GRAMD1B-217ENST00000640939 SMC4Q9NTJ3 1288 aa28.54■■■□□ 2.16
GRAMD1B-217ENST00000640939 GJA3Q9Y6H8 435 aa28.54■■■□□ 2.16
GRAMD1B-217ENST00000640939 SPEF2Q9C093 1822 aa28.53■■■□□ 2.16
GRAMD1B-217ENST00000640939 KIAA2012Q0VF49 1180 aa28.53■■■□□ 2.16
GRAMD1B-217ENST00000640939 L3MBTL3Q96JM7 780 aaPredicted RBP28.53■■■□□ 2.16
GRAMD1B-217ENST00000640939 CDC5LQ99459 802 aaKnown RBP28.53■■■□□ 2.16
GRAMD1B-217ENST00000640939 POLLQ9UGP5 575 aa28.53■■■□□ 2.16
GRAMD1B-217ENST00000640939 LTBP1Q14766 1721 aa28.52■■■□□ 2.16
GRAMD1B-217ENST00000640939 RTL9Q8NET4 1388 aa28.52■■■□□ 2.16
GRAMD1B-217ENST00000640939 PTPRCP08575 1304 aa28.52■■■□□ 2.16
GRAMD1B-217ENST00000640939 C6orf229H3BNL8 230 aa28.52■■■□□ 2.16
GRAMD1B-217ENST00000640939 ALDH1L1O75891 902 aa28.52■■■□□ 2.16
GRAMD1B-217ENST00000640939 GPC2Q8N158 579 aa28.52■■■□□ 2.16
GRAMD1B-217ENST00000640939 GPR101Q96P66 508 aaPredicted RBP28.52■■■□□ 2.16
GRAMD1B-217ENST00000640939 GRM8O00222 908 aa28.51■■■□□ 2.15
GRAMD1B-217ENST00000640939 FAM161AQ3B820 660 aa28.51■■■□□ 2.15
GRAMD1B-217ENST00000640939 RIMBP2O15034 1052 aa28.5■■■□□ 2.15
GRAMD1B-217ENST00000640939 CT47B1P0C2W7 299 aaPredicted RBP28.5■■■□□ 2.15
GRAMD1B-217ENST00000640939 HSPA6P17066 643 aa28.5■■■□□ 2.15
GRAMD1B-217ENST00000640939 TBC1D16Q8TBP0 767 aa28.5■■■□□ 2.15
GRAMD1B-217ENST00000640939 C9orf78Q9NZ63 289 aaPredicted RBP28.5■■■□□ 2.15
GRAMD1B-217ENST00000640939 ANKIB1Q9P2G1 1089 aa28.5■■■□□ 2.15
GRAMD1B-217ENST00000640939 ZNRF3Q9ULT6 936 aa28.5■■■□□ 2.15
GRAMD1B-217ENST00000640939 SCN4AP35499 1836 aa28.49■■■□□ 2.15
GRAMD1B-217ENST00000640939 IQCA1LA6NCM1 817 aa28.49■■■□□ 2.15
GRAMD1B-217ENST00000640939 CSF1RP07333 972 aa28.49■■■□□ 2.15
GRAMD1B-217ENST00000640939 ITGA6P23229 1130 aa28.49■■■□□ 2.15
GRAMD1B-217ENST00000640939 FOXO4P98177 505 aa28.49■■■□□ 2.15
GRAMD1B-217ENST00000640939 WASHC4Q2M389 1173 aa28.49■■■□□ 2.15
GRAMD1B-217ENST00000640939 FSTL1Q12841 308 aa28.48■■■□□ 2.15
GRAMD1B-217ENST00000640939 SMC1BQ8NDV3 1235 aa28.48■■■□□ 2.15
GRAMD1B-217ENST00000640939 PODXL2Q9NZ53 605 aa28.48■■■□□ 2.15
GRAMD1B-217ENST00000640939 UFL1O94874 794 aa28.47■■■□□ 2.15
GRAMD1B-217ENST00000640939 EPHA10Q5JZY3 1008 aa28.47■■■□□ 2.15
GRAMD1B-217ENST00000640939 TAF1DQ9H5J8 278 aaPredicted RBP28.47■■■□□ 2.15
GRAMD1B-217ENST00000640939 HACL1Q9UJ83 578 aa28.47■■■□□ 2.15
GRAMD1B-217ENST00000640939 POTEIP0CG38 1075 aa28.46■■■□□ 2.15
GRAMD1B-217ENST00000640939 POTEJP0CG39 1038 aa28.46■■■□□ 2.15
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms