RNA–Protein interactions for RNA: ENST00000639300.1

SCARB2-216, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 4,554 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-216ENST00000639300 CT47A1Q5JQC4 288 aaPredicted RBP16.74■□□□□ 0.27
SCARB2-216ENST00000639300 MFSD6Q6ZSS7 791 aa16.74■□□□□ 0.27
SCARB2-216ENST00000639300 NDUFB9Q9Y6M9 179 aa16.74■□□□□ 0.27
SCARB2-216ENST00000639300 TTF1Q15361 905 aaPredicted RBP16.73■□□□□ 0.27
SCARB2-216ENST00000639300 ARHGAP29Q52LW3 1261 aa16.73■□□□□ 0.27
SCARB2-216ENST00000639300 ARHGEF5Q12774 1597 aa16.73■□□□□ 0.27
SCARB2-216ENST00000639300 PLEKHG3A1L390 1219 aa16.73■□□□□ 0.27
SCARB2-216ENST00000639300 IL17REQ8NFR9 667 aa16.73■□□□□ 0.27
SCARB2-216ENST00000639300 CCDC171Q6TFL3 1326 aa16.73■□□□□ 0.27
SCARB2-216ENST00000639300 URI1O94763 535 aaPredicted RBP16.73■□□□□ 0.27
SCARB2-216ENST00000639300 EIF5P55010 431 aaKnown RBP16.73■□□□□ 0.27
SCARB2-216ENST00000639300 APOBRQ0VD83 1088 aa16.73■□□□□ 0.27
SCARB2-216ENST00000639300 STX1AQ16623 288 aa16.73■□□□□ 0.27
SCARB2-216ENST00000639300 UVSSAQ2YD98 709 aa16.73■□□□□ 0.27
SCARB2-216ENST00000639300 HSP90AA4PQ58FG1 418 aa16.73■□□□□ 0.27
SCARB2-216ENST00000639300 TMC6Q7Z403 805 aa16.73■□□□□ 0.27
SCARB2-216ENST00000639300 KIF18AQ8NI77 898 aa16.73■□□□□ 0.27
SCARB2-216ENST00000639300 FAM227BQ96M60 508 aa16.73■□□□□ 0.27
SCARB2-216ENST00000639300 EPB41L2O43491 1005 aaKnown RBP16.72■□□□□ 0.27
SCARB2-216ENST00000639300 KCNQ3O43525 872 aa16.72■□□□□ 0.27
SCARB2-216ENST00000639300 NOM1Q5C9Z4 860 aaKnown RBP16.72■□□□□ 0.27
SCARB2-216ENST00000639300 CCDC186Q7Z3E2 898 aa16.72■□□□□ 0.27
SCARB2-216ENST00000639300 ACSBG1Q96GR2 724 aa16.72■□□□□ 0.27
SCARB2-216ENST00000639300 DNAJC25Q9H1X3 360 aa16.72■□□□□ 0.27
SCARB2-216ENST00000639300 DCAF5Q96JK2 942 aa16.72■□□□□ 0.27
SCARB2-216ENST00000639300 MARCKSP29966 332 aaPredicted RBP16.72■□□□□ 0.27
SCARB2-216ENST00000639300 CCDC129Q6ZRS4 1044 aa16.72■□□□□ 0.27
SCARB2-216ENST00000639300 NGLY1Q96IV0 654 aa16.72■□□□□ 0.27
SCARB2-216ENST00000639300 DBNDD2Q9BQY9 259 aa16.72■□□□□ 0.27
SCARB2-216ENST00000639300 USP44Q9H0E7 712 aa16.72■□□□□ 0.27
SCARB2-216ENST00000639300 ZFYP08048 801 aaPredicted RBP16.71■□□□□ 0.27
SCARB2-216ENST00000639300 NLRP5P59047 1200 aa16.71■□□□□ 0.27
SCARB2-216ENST00000639300 ABCC4O15439 1325 aa16.71■□□□□ 0.27
SCARB2-216ENST00000639300 TRPM2O94759 1503 aa16.71■□□□□ 0.27
SCARB2-216ENST00000639300 SGSM2O43147 1006 aa16.71■□□□□ 0.27
SCARB2-216ENST00000639300 FAM200AQ8TCP9 573 aa16.71■□□□□ 0.27
SCARB2-216ENST00000639300 AK7Q96M32 723 aa16.71■□□□□ 0.27
SCARB2-216ENST00000639300 ALG1Q9BT22 464 aa16.71■□□□□ 0.27
SCARB2-216ENST00000639300 YEATS2Q9ULM3 1422 aa16.71■□□□□ 0.27
SCARB2-216ENST00000639300 RUFY3Q7L099 469 aa16.71■□□□□ 0.27
SCARB2-216ENST00000639300 CATIPQ7Z7H3 387 aa16.71■□□□□ 0.27
SCARB2-216ENST00000639300 ABCA8O94911 1581 aa16.71■□□□□ 0.26
SCARB2-216ENST00000639300 ZBTB43O43298 467 aa16.7■□□□□ 0.26
SCARB2-216ENST00000639300 ZNF444Q8N0Y2 327 aaPredicted RBP16.7■□□□□ 0.26
SCARB2-216ENST00000639300 CDC5LQ99459 802 aaKnown RBP16.7■□□□□ 0.26
SCARB2-216ENST00000639300 SAMD9LQ8IVG5 1584 aa16.7■□□□□ 0.26
SCARB2-216ENST00000639300 FAM89AQ96GI7 184 aa16.7■□□□□ 0.26
SCARB2-216ENST00000639300 ADGBQ8N7X0 1667 aa16.7■□□□□ 0.26
SCARB2-216ENST00000639300 RBSNQ9H1K0 784 aa16.7■□□□□ 0.26
SCARB2-216ENST00000639300 TMX1Q9H3N1 280 aa16.7■□□□□ 0.26
SCARB2-216ENST00000639300 PRC1O43663 620 aa16.7■□□□□ 0.26
SCARB2-216ENST00000639300 ZFYVE27Q5T4F4 411 aa16.7■□□□□ 0.26
SCARB2-216ENST00000639300 BMP2KQ9NSY1 1161 aaPredicted RBP16.7■□□□□ 0.26
SCARB2-216ENST00000639300 SNX14Q9Y5W7 946 aa16.7■□□□□ 0.26
SCARB2-216ENST00000639300 CBX1P83916 185 aa16.69■□□□□ 0.26
SCARB2-216ENST00000639300 CCDC102BQ68D86 513 aa16.69■□□□□ 0.26
SCARB2-216ENST00000639300 PPP1R1BQ9UD71 204 aaPredicted RBP16.69■□□□□ 0.26
SCARB2-216ENST00000639300 ZKSCAN5Q9Y2L8 839 aa16.69■□□□□ 0.26
SCARB2-216ENST00000639300 SUCLG2Q96I99 432 aa16.69■□□□□ 0.26
SCARB2-216ENST00000639300 TSPY2A6NKD2 308 aa16.69■□□□□ 0.26
SCARB2-216ENST00000639300 UQCRFS1P1P0C7P4 283 aa16.69■□□□□ 0.26
SCARB2-216ENST00000639300 IL2RBP14784 551 aa16.69■□□□□ 0.26
SCARB2-216ENST00000639300 RXRAP19793 462 aa16.69■□□□□ 0.26
SCARB2-216ENST00000639300 SYKP43405 635 aa16.69■□□□□ 0.26
SCARB2-216ENST00000639300 EIF4A1P60842 406 aaKnown RBP16.69■□□□□ 0.26
SCARB2-216ENST00000639300 DDX17Q92841 729 aaKnown RBP16.69■□□□□ 0.26
SCARB2-216ENST00000639300 ZNF496Q96IT1 587 aaPredicted RBP16.69■□□□□ 0.26
SCARB2-216ENST00000639300 MPHOSPH10O00566 681 aaKnown RBP16.68■□□□□ 0.26
SCARB2-216ENST00000639300 A1BGP04217 495 aa16.68■□□□□ 0.26
SCARB2-216ENST00000639300 AXDND1Q5T1B0 1012 aaPredicted RBP16.68■□□□□ 0.26
SCARB2-216ENST00000639300 DHX32Q7L7V1 743 aaKnown RBP16.68■□□□□ 0.26
SCARB2-216ENST00000639300 CCDC194A0A1B0GVG4 234 aa16.68■□□□□ 0.26
SCARB2-216ENST00000639300 CYP7A1P22680 504 aa16.68■□□□□ 0.26
SCARB2-216ENST00000639300 ERCC4Q92889 916 aaPredicted RBP16.68■□□□□ 0.26
SCARB2-216ENST00000639300 EDC3Q96F86 508 aaKnown RBP16.68■□□□□ 0.26
SCARB2-216ENST00000639300 VAT1LQ9HCJ6 419 aa16.68■□□□□ 0.26
SCARB2-216ENST00000639300 TYRO3Q06418 890 aa16.68■□□□□ 0.26
SCARB2-216ENST00000639300 NOLC1Q14978 699 aaKnown RBP eCLIP16.68■□□□□ 0.26
SCARB2-216ENST00000639300 RTL1A6NKG5 1358 aa16.68■□□□□ 0.26
SCARB2-216ENST00000639300 WTAPQ15007 396 aa16.67■□□□□ 0.26
SCARB2-216ENST00000639300 CHAMP1Q96JM3 812 aa16.67■□□□□ 0.26
SCARB2-216ENST00000639300 PRDM10Q9NQV6 1147 aa16.67■□□□□ 0.26
SCARB2-216ENST00000639300 ZNF594Q96JF6 807 aaPredicted RBP16.67■□□□□ 0.26
SCARB2-216ENST00000639300 PTPDC1A2A3K4 754 aa16.67■□□□□ 0.26
SCARB2-216ENST00000639300 RNF113AO15541 343 aaKnown RBP16.67■□□□□ 0.26
SCARB2-216ENST00000639300 MRPS27Q92552 414 aaKnown RBP16.67■□□□□ 0.26
SCARB2-216ENST00000639300 SIRT1Q96EB6 747 aa16.67■□□□□ 0.26
SCARB2-216ENST00000639300 SLC4A4Q9Y6R1 1079 aa16.67■□□□□ 0.26
SCARB2-216ENST00000639300 C6orf229H3BNL8 230 aa16.66■□□□□ 0.26
SCARB2-216ENST00000639300 RRAGDQ9NQL2 400 aaPredicted RBP16.66■□□□□ 0.26
SCARB2-216ENST00000639300 STX8Q9UNK0 236 aa16.66■□□□□ 0.26
SCARB2-216ENST00000639300 PKP1Q13835 747 aa16.66■□□□□ 0.26
SCARB2-216ENST00000639300 METTL22Q9BUU2 404 aaPredicted RBP16.66■□□□□ 0.26
SCARB2-216ENST00000639300 METP08581 1390 aa16.66■□□□□ 0.26
SCARB2-216ENST00000639300 HOXB7P09629 217 aa16.66■□□□□ 0.26
SCARB2-216ENST00000639300 BABAM1Q9NWV8 329 aa16.66■□□□□ 0.26
SCARB2-216ENST00000639300 SEC63Q9UGP8 760 aaKnown RBP16.66■□□□□ 0.26
SCARB2-216ENST00000639300 PALD1Q9ULE6 856 aa16.66■□□□□ 0.26
SCARB2-216ENST00000639300 KIF2AO00139 706 aaPredicted RBP16.65■□□□□ 0.26
SCARB2-216ENST00000639300 KIAA1328Q86T90 577 aa16.65■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms