RNA–Protein interactions for RNA: ENST00000637276.1

CACNA1A-238, Transcript of calcium voltage-gated channel subunit alpha1 A, human

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 7,135 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CACNA1A-238	ENST00000637276	MCM4	P33991	863 aa		18.69	■□□□□ 0.58
CACNA1A-238	ENST00000637276	CETN1	Q12798	172 aa		18.69	■□□□□ 0.58
CACNA1A-238	ENST00000637276	YEATS4	O95619	227 aa		18.68	■□□□□ 0.58
CACNA1A-238	ENST00000637276	TTF1	Q15361	905 aa	Predicted RBP	18.68	■□□□□ 0.58
CACNA1A-238	ENST00000637276	SREK1	Q8WXA9	508 aa	Known RBP	18.68	■□□□□ 0.58
CACNA1A-238	ENST00000637276	IRAK4	Q9NWZ3	460 aa		18.68	■□□□□ 0.58
CACNA1A-238	ENST00000637276	ABCF3	Q9NUQ8	709 aa		18.68	■□□□□ 0.58
CACNA1A-238	ENST00000637276	SSFA2	P28290	1259 aa		18.68	■□□□□ 0.58
CACNA1A-238	ENST00000637276	CCDC184	Q52MB2	194 aa		18.68	■□□□□ 0.58
CACNA1A-238	ENST00000637276	SMARCC1	Q92922	1105 aa	Predicted RBP	18.68	■□□□□ 0.58
CACNA1A-238	ENST00000637276	MAK16	Q9BXY0	300 aa	Known RBP	18.68	■□□□□ 0.58
CACNA1A-238	ENST00000637276	FAM169A	Q9Y6X4	670 aa		18.68	■□□□□ 0.58
CACNA1A-238	ENST00000637276	PPP4R3B	Q5MIZ7	849 aa		18.68	■□□□□ 0.58
CACNA1A-238	ENST00000637276	CCDC117	Q8IWD4	279 aa	Predicted RBP	18.68	■□□□□ 0.58
CACNA1A-238	ENST00000637276	FSIP1	Q8NA03	581 aa		18.68	■□□□□ 0.58
CACNA1A-238	ENST00000637276	ESPN	B1AK53	854 aa		18.67	■□□□□ 0.58
CACNA1A-238	ENST00000637276	HSF2BP	O75031	334 aa		18.67	■□□□□ 0.58
CACNA1A-238	ENST00000637276	TSPY3	P0CV98	308 aa		18.67	■□□□□ 0.58
CACNA1A-238	ENST00000637276	TSPY8	P0CW00	308 aa		18.67	■□□□□ 0.58
CACNA1A-238	ENST00000637276	PDIA4	P13667	645 aa	Known RBP	18.67	■□□□□ 0.58
CACNA1A-238	ENST00000637276	MAP9	Q49MG5	647 aa		18.67	■□□□□ 0.58
CACNA1A-238	ENST00000637276	EXOC1	Q9NV70	894 aa		18.67	■□□□□ 0.58
CACNA1A-238	ENST00000637276	DDX39A	O00148	427 aa	Known RBP	18.67	■□□□□ 0.58
CACNA1A-238	ENST00000637276	MICALCL	Q6ZW33	695 aa		18.67	■□□□□ 0.58
CACNA1A-238	ENST00000637276	PPP6R1	Q9UPN7	881 aa		18.67	■□□□□ 0.58
CACNA1A-238	ENST00000637276	WHAMM	Q8TF30	809 aa		18.67	■□□□□ 0.58
CACNA1A-238	ENST00000637276	SFMBT1	Q9UHJ3	866 aa		18.67	■□□□□ 0.58
CACNA1A-238	ENST00000637276	SPDYE16	A6NNV3	312 aa	Predicted RBP	18.67	■□□□□ 0.58
CACNA1A-238	ENST00000637276	SPDYE2	Q495Y8	402 aa		18.67	■□□□□ 0.58
CACNA1A-238	ENST00000637276	RPGRIP1L	Q68CZ1	1315 aa		18.67	■□□□□ 0.58
CACNA1A-238	ENST00000637276	TRIM47	Q96LD4	638 aa		18.67	■□□□□ 0.58
CACNA1A-238	ENST00000637276	TXNDC16	Q9P2K2	825 aa		18.67	■□□□□ 0.58
CACNA1A-238	ENST00000637276	MAP3K12	Q12852	859 aa		18.66	■□□□□ 0.58
CACNA1A-238	ENST00000637276	CEP112	Q8N8E3	955 aa		18.66	■□□□□ 0.58
CACNA1A-238	ENST00000637276		A0A087WZG4	1122 aa		18.66	■□□□□ 0.58
CACNA1A-238	ENST00000637276	LRRC45	Q96CN5	670 aa		18.66	■□□□□ 0.58
CACNA1A-238	ENST00000637276	STK25	O00506	426 aa		18.66	■□□□□ 0.58
CACNA1A-238	ENST00000637276	CHMP2A	O43633	222 aa		18.66	■□□□□ 0.58
CACNA1A-238	ENST00000637276	NOL3	O60936	208 aa	Known RBP	18.66	■□□□□ 0.58
CACNA1A-238	ENST00000637276	CEP135	Q66GS9	1140 aa		18.66	■□□□□ 0.58
CACNA1A-238	ENST00000637276	BACH2	Q9BYV9	841 aa		18.66	■□□□□ 0.58
CACNA1A-238	ENST00000637276	SUDS3	Q9H7L9	328 aa	Predicted RBP	18.66	■□□□□ 0.58
CACNA1A-238	ENST00000637276	NOL12	Q9UGY1	213 aa	Known RBP eCLIP	18.66	■□□□□ 0.58
CACNA1A-238	ENST00000637276	FEZ2	Q9UHY8	353 aa	Predicted RBP	18.66	■□□□□ 0.58
CACNA1A-238	ENST00000637276		V9GYY5	206 aa	Predicted RBP	18.66	■□□□□ 0.58
CACNA1A-238	ENST00000637276	SEC62	Q99442	399 aa	Known RBP	18.66	■□□□□ 0.58
CACNA1A-238	ENST00000637276	SAP30BP	Q9UHR5	308 aa	Known RBP	18.66	■□□□□ 0.58
CACNA1A-238	ENST00000637276	FMNL3	Q8IVF7	1028 aa		18.65	■□□□□ 0.58
CACNA1A-238	ENST00000637276	PLEKHA4	Q9H4M7	779 aa		18.65	■□□□□ 0.58
CACNA1A-238	ENST00000637276	TRAF3IP1	Q8TDR0	691 aa	Predicted RBP	18.65	■□□□□ 0.58
CACNA1A-238	ENST00000637276	C8orf37	Q96NL8	207 aa		18.65	■□□□□ 0.58
CACNA1A-238	ENST00000637276	TLDC2	A0PJX2	215 aa		18.65	■□□□□ 0.58
CACNA1A-238	ENST00000637276	EAPP	Q56P03	285 aa	Predicted RBP	18.65	■□□□□ 0.58
CACNA1A-238	ENST00000637276	IFT81	Q8WYA0	676 aa		18.65	■□□□□ 0.58
CACNA1A-238	ENST00000637276	CEP57	Q86XR8	500 aa		18.65	■□□□□ 0.58
CACNA1A-238	ENST00000637276	CHMP6	Q96FZ7	201 aa		18.65	■□□□□ 0.58
CACNA1A-238	ENST00000637276	METTL14	Q9HCE5	456 aa	Known RBP	18.65	■□□□□ 0.58
CACNA1A-238	ENST00000637276	HSPA1L	P34931	641 aa		18.64	■□□□□ 0.58
CACNA1A-238	ENST00000637276	CHST3	Q7LGC8	479 aa		18.64	■□□□□ 0.58
CACNA1A-238	ENST00000637276	RAB34	Q9BZG1	259 aa		18.64	■□□□□ 0.58
CACNA1A-238	ENST00000637276	GNAT3	A8MTJ3	354 aa		18.64	■□□□□ 0.57
CACNA1A-238	ENST00000637276	CCDC12	Q8WUD4	166 aa	Predicted RBP	18.64	■□□□□ 0.57
CACNA1A-238	ENST00000637276	PRPF31	Q8WWY3	499 aa	Known RBP	18.64	■□□□□ 0.57
CACNA1A-238	ENST00000637276	MNAT1	P51948	309 aa		18.64	■□□□□ 0.57
CACNA1A-238	ENST00000637276	CCDC89	Q8N998	374 aa		18.64	■□□□□ 0.57
CACNA1A-238	ENST00000637276	EIF6	P56537	245 aa	Known RBP	18.64	■□□□□ 0.57
CACNA1A-238	ENST00000637276	ZSCAN31	Q96LW9	406 aa	Predicted RBP	18.64	■□□□□ 0.57
CACNA1A-238	ENST00000637276	BRD4	O60885	1362 aa	Predicted RBP	18.64	■□□□□ 0.57
CACNA1A-238	ENST00000637276	DDX46	Q7L014	1031 aa	Known RBP	18.64	■□□□□ 0.57
CACNA1A-238	ENST00000637276	AGTPBP1	Q9UPW5	1226 aa		18.64	■□□□□ 0.57
CACNA1A-238	ENST00000637276	TCP11L1	Q9NUJ3	509 aa		18.64	■□□□□ 0.57
CACNA1A-238	ENST00000637276	ARID4A	P29374	1257 aa	Predicted RBP	18.63	■□□□□ 0.57
CACNA1A-238	ENST00000637276	DUSP27	Q5VZP5	1158 aa		18.63	■□□□□ 0.57
CACNA1A-238	ENST00000637276	ST5	P78524	1137 aa		18.63	■□□□□ 0.57
CACNA1A-238	ENST00000637276	KIF18A	Q8NI77	898 aa		18.63	■□□□□ 0.57
CACNA1A-238	ENST00000637276	KIFC2	Q96AC6	838 aa		18.63	■□□□□ 0.57
CACNA1A-238	ENST00000637276	LCA5	Q86VQ0	697 aa		18.63	■□□□□ 0.57
CACNA1A-238	ENST00000637276	HLA-DOA	P06340	250 aa		18.63	■□□□□ 0.57
CACNA1A-238	ENST00000637276	ATRIP	Q8WXE1	791 aa		18.63	■□□□□ 0.57
CACNA1A-238	ENST00000637276	GTPBP4	Q9BZE4	634 aa	Known RBP	18.63	■□□□□ 0.57
CACNA1A-238	ENST00000637276	KIF5B	P33176	963 aa		18.63	■□□□□ 0.57
CACNA1A-238	ENST00000637276	DCAF17	Q5H9S7	520 aa	Predicted RBP	18.63	■□□□□ 0.57
CACNA1A-238	ENST00000637276	CCDC183	Q5T5S1	534 aa		18.63	■□□□□ 0.57
CACNA1A-238	ENST00000637276	SPECC1L	Q69YQ0	1117 aa		18.63	■□□□□ 0.57
CACNA1A-238	ENST00000637276	MPHOSPH6	Q99547	160 aa	Known RBP	18.63	■□□□□ 0.57
CACNA1A-238	ENST00000637276	DAPK3	O43293	454 aa		18.62	■□□□□ 0.57
CACNA1A-238	ENST00000637276	ANO10	Q9NW15	660 aa		18.62	■□□□□ 0.57
CACNA1A-238	ENST00000637276	KIF22	Q14807	665 aa		18.62	■□□□□ 0.57
CACNA1A-238	ENST00000637276	RRAGB	Q5VZM2	374 aa		18.62	■□□□□ 0.57
CACNA1A-238	ENST00000637276	CCDC155	Q8N6L0	562 aa		18.62	■□□□□ 0.57
CACNA1A-238	ENST00000637276		U3KPZ7	1027 aa	Predicted RBP	18.62	■□□□□ 0.57
CACNA1A-238	ENST00000637276	ZSCAN12	O43309	604 aa		18.62	■□□□□ 0.57
CACNA1A-238	ENST00000637276	RNF169	Q8NCN4	708 aa		18.62	■□□□□ 0.57
CACNA1A-238	ENST00000637276	RSPH14	Q9UHP6	348 aa		18.62	■□□□□ 0.57
CACNA1A-238	ENST00000637276	GJB2	P29033	226 aa		18.62	■□□□□ 0.57
CACNA1A-238	ENST00000637276	MSL1	Q68DK7	614 aa		18.62	■□□□□ 0.57
CACNA1A-238	ENST00000637276	DCLK2	Q8N568	766 aa		18.62	■□□□□ 0.57
CACNA1A-238	ENST00000637276	FAM114A2	Q9NRY5	505 aa		18.61	■□□□□ 0.57
CACNA1A-238	ENST00000637276	RIOK3	O14730	519 aa	Known RBP	18.61	■□□□□ 0.57
CACNA1A-238	ENST00000637276	NCBP1	Q09161	790 aa	Known RBP	18.61	■□□□□ 0.57

Retrieved 100 of 20,778 RNA–protein pairs in 8.8 ms