RNA–Protein interactions for RNA: ENST00000628696.2

SMN2-215, Transcript of survival of motor neuron 2, centromeric, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SMN2, Length 885 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-215ENST00000628696 HDGFL1Q5TGJ6 251 aa24.74■■□□□ 1.55
SMN2-215ENST00000628696 PAXIP1Q6ZW49 1069 aaPredicted RBP24.74■■□□□ 1.55
SMN2-215ENST00000628696 PRDM10Q9NQV6 1147 aa24.74■■□□□ 1.55
SMN2-215ENST00000628696 GPRC5DQ9NZD1 345 aa24.74■■□□□ 1.55
SMN2-215ENST00000628696 WDR33Q9C0J8 1336 aaKnown RBP24.74■■□□□ 1.55
SMN2-215ENST00000628696 TRPM7Q96QT4 1865 aa24.73■■□□□ 1.55
SMN2-215ENST00000628696 TRAF5O00463 557 aa24.73■■□□□ 1.55
SMN2-215ENST00000628696 GRAPQ13588 217 aa24.73■■□□□ 1.55
SMN2-215ENST00000628696 GRAPLQ8TC17 118 aaPredicted RBP24.73■■□□□ 1.55
SMN2-215ENST00000628696 ADARB2Q9NS39 739 aaKnown RBP24.73■■□□□ 1.55
SMN2-215ENST00000628696 GMPSP49915 693 aaPredicted RBP24.72■■□□□ 1.55
SMN2-215ENST00000628696 LBX1P52954 281 aa24.72■■□□□ 1.55
SMN2-215ENST00000628696 RAD17O75943 681 aa24.71■■□□□ 1.55
SMN2-215ENST00000628696 GRM1Q13255 1194 aa24.71■■□□□ 1.55
SMN2-215ENST00000628696 CIAPIN1Q6FI81 312 aa24.71■■□□□ 1.55
SMN2-215ENST00000628696 ANKRD13DQ6ZTN6 518 aa24.71■■□□□ 1.55
SMN2-215ENST00000628696 PLBD2Q8NHP8 589 aa24.71■■□□□ 1.55
SMN2-215ENST00000628696 BCL2L13Q9BXK5 485 aa24.71■■□□□ 1.55
SMN2-215ENST00000628696 ADAMTS8Q9UP79 889 aa24.71■■□□□ 1.55
SMN2-215ENST00000628696 ATP5J2-PTCD1G3V325 749 aa24.7■■□□□ 1.54
SMN2-215ENST00000628696 KIAA2012Q0VF49 1180 aa24.7■■□□□ 1.54
SMN2-215ENST00000628696 MAP2K1Q02750 393 aaPredicted RBP24.69■■□□□ 1.54
SMN2-215ENST00000628696 TNIP1Q15025 636 aa24.69■■□□□ 1.54
SMN2-215ENST00000628696 FAM89AQ96GI7 184 aa24.69■■□□□ 1.54
SMN2-215ENST00000628696 DBF4Q9UBU7 674 aaPredicted RBP24.69■■□□□ 1.54
SMN2-215ENST00000628696 CST9Q5W186 159 aa24.68■■□□□ 1.54
SMN2-215ENST00000628696 CAPNS2Q96L46 248 aa24.68■■□□□ 1.54
SMN2-215ENST00000628696 HOXB7P09629 217 aa24.67■■□□□ 1.54
SMN2-215ENST00000628696 ECE1P42892 770 aa24.67■■□□□ 1.54
SMN2-215ENST00000628696 RTL5Q5HYW3 569 aaPredicted RBP24.67■■□□□ 1.54
SMN2-215ENST00000628696 CYP4F22Q6NT55 531 aa24.67■■□□□ 1.54
SMN2-215ENST00000628696 TMC4Q7Z404 712 aa24.67■■□□□ 1.54
SMN2-215ENST00000628696 ISCA1Q9BUE6 129 aa24.67■■□□□ 1.54
SMN2-215ENST00000628696 DDX60Q8IY21 1712 aaKnown RBP24.66■■□□□ 1.54
SMN2-215ENST00000628696 DUSP27Q5VZP5 1158 aa24.66■■□□□ 1.54
SMN2-215ENST00000628696 HSPA8P11142 646 aaKnown RBP24.65■■□□□ 1.54
SMN2-215ENST00000628696 CFAP44Q96MT7 982 aa24.65■■□□□ 1.54
SMN2-215ENST00000628696 GPR101Q96P66 508 aaPredicted RBP24.65■■□□□ 1.54
SMN2-215ENST00000628696 GLIS2Q9BZE0 524 aaPredicted RBP24.65■■□□□ 1.54
SMN2-215ENST00000628696 HYPKQ9NX55 129 aa24.65■■□□□ 1.54
SMN2-215ENST00000628696 NSFL1CQ9UNZ2 370 aaKnown RBP24.65■■□□□ 1.54
SMN2-215ENST00000628696 CELF1Q92879 486 aaKnown RBP24.64■■□□□ 1.54
SMN2-215ENST00000628696 CNOT7Q9UIV1 285 aaKnown RBP24.64■■□□□ 1.54
SMN2-215ENST00000628696 TLL2Q9Y6L7 1015 aa24.64■■□□□ 1.54
SMN2-215ENST00000628696 YDJCA8MPS7 323 aa24.63■■□□□ 1.53
SMN2-215ENST00000628696 CELF2O95319 508 aaKnown RBP24.63■■□□□ 1.53
SMN2-215ENST00000628696 SF3B3Q15393 1217 aaKnown RBP24.63■■□□□ 1.53
SMN2-215ENST00000628696 BEGAINQ9BUH8 593 aa24.63■■□□□ 1.53
SMN2-215ENST00000628696 MBIPQ9NS73 344 aa24.63■■□□□ 1.53
SMN2-215ENST00000628696 CDHR2Q9BYE9 1310 aa24.62■■□□□ 1.53
SMN2-215ENST00000628696 C6orf229H3BNL8 230 aa24.62■■□□□ 1.53
SMN2-215ENST00000628696 RIMBP2O15034 1052 aa24.62■■□□□ 1.53
SMN2-215ENST00000628696 HIRAP54198 1017 aaPredicted RBP24.62■■□□□ 1.53
SMN2-215ENST00000628696 WASHC4Q2M389 1173 aa24.62■■□□□ 1.53
SMN2-215ENST00000628696 ZNF408Q9H9D4 720 aa24.62■■□□□ 1.53
SMN2-215ENST00000628696 SHTN1A0MZ66 631 aa24.61■■□□□ 1.53
SMN2-215ENST00000628696 H7C1D1 291 aa24.61■■□□□ 1.53
SMN2-215ENST00000628696 IRS4O14654 1257 aaPredicted RBP24.61■■□□□ 1.53
SMN2-215ENST00000628696 RIC3Q7Z5B4 369 aa24.61■■□□□ 1.53
SMN2-215ENST00000628696 TRPM4Q8TD43 1214 aa24.61■■□□□ 1.53
SMN2-215ENST00000628696 DBNDD1Q9H9R9 158 aa24.61■■□□□ 1.53
SMN2-215ENST00000628696 DUOX1Q9NRD9 1551 aa24.61■■□□□ 1.53
SMN2-215ENST00000628696 LRRC37AA6NMS7 1700 aa24.61■■□□□ 1.53
SMN2-215ENST00000628696 ZC3H15Q8WU90 426 aaKnown RBP24.6■■□□□ 1.53
SMN2-215ENST00000628696 PGAP2Q9UHJ9 254 aa24.6■■□□□ 1.53
SMN2-215ENST00000628696 ZBTB12Q9Y330 459 aaPredicted RBP24.6■■□□□ 1.53
SMN2-215ENST00000628696 ELL2O00472 640 aaPredicted RBP24.59■■□□□ 1.53
SMN2-215ENST00000628696 AOC2O75106 756 aa24.59■■□□□ 1.53
SMN2-215ENST00000628696 GPSM2P81274 684 aa24.59■■□□□ 1.53
SMN2-215ENST00000628696 GOLGA2Q08379 1002 aa24.59■■□□□ 1.53
SMN2-215ENST00000628696 MICALL2Q8IY33 904 aa24.59■■□□□ 1.53
SMN2-215ENST00000628696 PSMD14O00487 310 aa24.58■■□□□ 1.53
SMN2-215ENST00000628696 APAF1O14727 1248 aa24.58■■□□□ 1.53
SMN2-215ENST00000628696 TRIM28Q13263 835 aaKnown RBP24.58■■□□□ 1.53
SMN2-215ENST00000628696 CDC37L1Q7L3B6 337 aa24.58■■□□□ 1.53
SMN2-215ENST00000628696 SAPCD2Q86UD0 394 aa24.58■■□□□ 1.53
SMN2-215ENST00000628696 POLLQ9UGP5 575 aa24.58■■□□□ 1.53
SMN2-215ENST00000628696 RPS8P62241 208 aaKnown RBP24.57■■□□□ 1.52
SMN2-215ENST00000628696 DOK7Q18PE1 504 aa24.57■■□□□ 1.52
SMN2-215ENST00000628696 PHAXQ9H814 394 aaKnown RBP24.57■■□□□ 1.52
SMN2-215ENST00000628696 ZNF853P0CG23 659 aa24.56■■□□□ 1.52
SMN2-215ENST00000628696 SAMD7Q7Z3H4 446 aa24.56■■□□□ 1.52
SMN2-215ENST00000628696 USP48Q86UV5 1035 aa24.56■■□□□ 1.52
SMN2-215ENST00000628696 EYA3Q99504 573 aa24.56■■□□□ 1.52
SMN2-215ENST00000628696 PRKRIP1Q9H875 184 aaPredicted RBP24.56■■□□□ 1.52
SMN2-215ENST00000628696 IFT57Q9NWB7 429 aa24.56■■□□□ 1.52
SMN2-215ENST00000628696 THSD7BQ9C0I4 1608 aa24.56■■□□□ 1.52
SMN2-215ENST00000628696 POLR2AP24928 1970 aaKnown RBP24.56■■□□□ 1.52
SMN2-215ENST00000628696 COL4A1P02462 1669 aa24.56■■□□□ 1.52
SMN2-215ENST00000628696 MAP2K2P36507 400 aa24.55■■□□□ 1.52
SMN2-215ENST00000628696 GNAI1P63096 354 aa24.55■■□□□ 1.52
SMN2-215ENST00000628696 ZBTB38Q8NAP3 1195 aaPredicted RBP24.55■■□□□ 1.52
SMN2-215ENST00000628696 DPF2Q92785 391 aa24.55■■□□□ 1.52
SMN2-215ENST00000628696 MYD88Q99836 296 aa24.55■■□□□ 1.52
SMN2-215ENST00000628696 TSKSQ9UJT2 592 aa24.55■■□□□ 1.52
SMN2-215ENST00000628696 ECE2O60344 883 aa24.54■■□□□ 1.52
SMN2-215ENST00000628696 CALD1Q05682 793 aaKnown RBP24.54■■□□□ 1.52
SMN2-215ENST00000628696 TBC1D10BQ4KMP7 808 aaPredicted RBP24.54■■□□□ 1.52
SMN2-215ENST00000628696 RBM26Q5T8P6 1007 aaKnown RBP24.54■■□□□ 1.52
SMN2-215ENST00000628696 TBC1D16Q8TBP0 767 aa24.54■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms