RNA–Protein interactions for RNA: ENST00000626620.3

KCNMA1-225, Transcript of potassium calcium-activated channel subfamily M alpha 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene KCNMA1, Length 3,660 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNMA1-225ENST00000626620 CEP350Q5VT06 3117 aa13.32□□□□□ -0.28
KCNMA1-225ENST00000626620 DCAF8L1A6NGE4 600 aa13.32□□□□□ -0.28
KCNMA1-225ENST00000626620 RFX5P48382 616 aaPredicted RBP13.32□□□□□ -0.28
KCNMA1-225ENST00000626620 PCDHB15Q9Y5E8 787 aa13.32□□□□□ -0.28
KCNMA1-225ENST00000626620 SF3B3Q15393 1217 aaKnown RBP13.32□□□□□ -0.28
KCNMA1-225ENST00000626620 TPTE2Q6XPS3 522 aa13.31□□□□□ -0.28
KCNMA1-225ENST00000626620 NBPF5PQ86XG9 351 aaPredicted RBP13.31□□□□□ -0.28
KCNMA1-225ENST00000626620 TTLL11Q8NHH1 800 aa13.31□□□□□ -0.28
KCNMA1-225ENST00000626620 BICC1Q9H694 974 aaKnown RBP13.31□□□□□ -0.28
KCNMA1-225ENST00000626620 IRS4O14654 1257 aaPredicted RBP13.31□□□□□ -0.28
KCNMA1-225ENST00000626620 GRIN3BO60391 1043 aa13.31□□□□□ -0.28
KCNMA1-225ENST00000626620 LRRFIP2Q9Y608 721 aaKnown RBP13.31□□□□□ -0.28
KCNMA1-225ENST00000626620 SNED1Q8TER0 1413 aa13.31□□□□□ -0.28
KCNMA1-225ENST00000626620 HCLS1P14317 486 aaPredicted RBP13.31□□□□□ -0.28
KCNMA1-225ENST00000626620 POLA2Q14181 598 aa13.31□□□□□ -0.28
KCNMA1-225ENST00000626620 CCDC24Q8N4L8 307 aa13.31□□□□□ -0.28
KCNMA1-225ENST00000626620 GNAI3P08754 354 aa13.3□□□□□ -0.28
KCNMA1-225ENST00000626620 CEP85Q6P2H3 762 aa13.3□□□□□ -0.28
KCNMA1-225ENST00000626620 CNBD1Q8NA66 436 aa13.3□□□□□ -0.28
KCNMA1-225ENST00000626620 BRIP1Q9BX63 1249 aa13.3□□□□□ -0.28
KCNMA1-225ENST00000626620 PARP3Q9Y6F1 533 aa13.3□□□□□ -0.28
KCNMA1-225ENST00000626620 SLX4Q8IY92 1834 aa13.3□□□□□ -0.28
KCNMA1-225ENST00000626620 PDE8AO60658 829 aa13.29□□□□□ -0.28
KCNMA1-225ENST00000626620 C1orf115Q9H7X2 142 aa13.29□□□□□ -0.28
KCNMA1-225ENST00000626620 C9orf78Q9NZ63 289 aaPredicted RBP13.29□□□□□ -0.28
KCNMA1-225ENST00000626620 FAM177BA6PVY3 158 aa13.29□□□□□ -0.28
KCNMA1-225ENST00000626620 NEFLP07196 543 aa13.29□□□□□ -0.28
KCNMA1-225ENST00000626620 CTSWP56202 376 aa13.29□□□□□ -0.28
KCNMA1-225ENST00000626620 DICER1Q9UPY3 1922 aaKnown RBP13.29□□□□□ -0.28
KCNMA1-225ENST00000626620 UBTFL1P0CB47 393 aaPredicted RBP13.29□□□□□ -0.28
KCNMA1-225ENST00000626620 TGFB2P61812 414 aa13.29□□□□□ -0.28
KCNMA1-225ENST00000626620 AAMPQ13685 434 aa13.29□□□□□ -0.28
KCNMA1-225ENST00000626620 RTL5Q5HYW3 569 aaPredicted RBP13.29□□□□□ -0.28
KCNMA1-225ENST00000626620 FER1L6Q2WGJ9 1857 aa13.28□□□□□ -0.28
KCNMA1-225ENST00000626620 PNMA6EA0A0J9YXQ4 647 aa13.28□□□□□ -0.28
KCNMA1-225ENST00000626620 GNAI2P04899 355 aa13.28□□□□□ -0.28
KCNMA1-225ENST00000626620 HOXA10P31260 410 aaPredicted RBP13.28□□□□□ -0.28
KCNMA1-225ENST00000626620 GPR162Q16538 588 aa13.28□□□□□ -0.28
KCNMA1-225ENST00000626620 TIAM2Q8IVF5 1701 aa13.28□□□□□ -0.28
KCNMA1-225ENST00000626620 ATP8B2P98198 1209 aa13.28□□□□□ -0.28
KCNMA1-225ENST00000626620 SSH3Q8TE77 659 aa13.28□□□□□ -0.28
KCNMA1-225ENST00000626620 C1QTNF8P60827 252 aa13.27□□□□□ -0.28
KCNMA1-225ENST00000626620 SRGNP10124 158 aa13.27□□□□□ -0.29
KCNMA1-225ENST00000626620 GREM2Q9H772 168 aa13.27□□□□□ -0.29
KCNMA1-225ENST00000626620 ARAP2Q8WZ64 1704 aa13.27□□□□□ -0.29
KCNMA1-225ENST00000626620 RBM19Q9Y4C8 960 aaKnown RBP13.27□□□□□ -0.29
KCNMA1-225ENST00000626620 SLC51AQ86UW1 340 aa13.26□□□□□ -0.29
KCNMA1-225ENST00000626620 DUOX1Q9NRD9 1551 aa13.26□□□□□ -0.29
KCNMA1-225ENST00000626620 LMBR1LQ6UX01 489 aa13.26□□□□□ -0.29
KCNMA1-225ENST00000626620 ST5P78524 1137 aa13.25□□□□□ -0.29
KCNMA1-225ENST00000626620 PTPN12Q05209 780 aaKnown RBP13.25□□□□□ -0.29
KCNMA1-225ENST00000626620 ZNF646O15015 1829 aaPredicted RBP13.25□□□□□ -0.29
KCNMA1-225ENST00000626620 FAM161AQ3B820 660 aa13.25□□□□□ -0.29
KCNMA1-225ENST00000626620 SEC31BQ9NQW1 1179 aa13.25□□□□□ -0.29
KCNMA1-225ENST00000626620 ERICH6BQ5W0A0 696 aa13.24□□□□□ -0.29
KCNMA1-225ENST00000626620 RPAP2Q8IXW5 612 aaPredicted RBP13.24□□□□□ -0.29
KCNMA1-225ENST00000626620 IGHDP01880 384 aa13.24□□□□□ -0.29
KCNMA1-225ENST00000626620 HDAC1Q13547 482 aaPredicted RBP13.24□□□□□ -0.29
KCNMA1-225ENST00000626620 C7orf43Q8WVR3 580 aa13.24□□□□□ -0.29
KCNMA1-225ENST00000626620 NOP58Q9Y2X3 529 aaKnown RBP13.24□□□□□ -0.29
KCNMA1-225ENST00000626620 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP13.24□□□□□ -0.29
KCNMA1-225ENST00000626620 CCDC88AQ3V6T2 1871 aa13.24□□□□□ -0.29
KCNMA1-225ENST00000626620 KDM2BQ8NHM5 1336 aa13.23□□□□□ -0.29
KCNMA1-225ENST00000626620 NLRP3Q96P20 1036 aa13.23□□□□□ -0.29
KCNMA1-225ENST00000626620 CHMP4BQ9H444 224 aaKnown RBP13.23□□□□□ -0.29
KCNMA1-225ENST00000626620 COPRSQ9NQ92 184 aa13.23□□□□□ -0.29
KCNMA1-225ENST00000626620 CRAMP1Q96RY5 1269 aa13.23□□□□□ -0.29
KCNMA1-225ENST00000626620 PDE6BP35913 854 aa13.23□□□□□ -0.29
KCNMA1-225ENST00000626620 STYK1Q6J9G0 422 aa13.23□□□□□ -0.29
KCNMA1-225ENST00000626620 ATG9AQ7Z3C6 839 aa13.23□□□□□ -0.29
KCNMA1-225ENST00000626620 CELF1Q92879 486 aaKnown RBP13.23□□□□□ -0.29
KCNMA1-225ENST00000626620 ITGA6P23229 1130 aa13.22□□□□□ -0.29
KCNMA1-225ENST00000626620 CHRNA5P30532 468 aa13.22□□□□□ -0.29
KCNMA1-225ENST00000626620 VGLL2Q8N8G2 317 aa13.21□□□□□ -0.29
KCNMA1-225ENST00000626620 KLHDC4Q8TBB5 520 aa13.21□□□□□ -0.29
KCNMA1-225ENST00000626620 RIPOR2Q9Y4F9 1068 aa13.21□□□□□ -0.29
KCNMA1-225ENST00000626620 DPEP1P16444 411 aa13.21□□□□□ -0.29
KCNMA1-225ENST00000626620 CCDC152Q4G0S7 254 aa13.21□□□□□ -0.29
KCNMA1-225ENST00000626620 ZNF594Q96JF6 807 aaPredicted RBP13.21□□□□□ -0.29
KCNMA1-225ENST00000626620 PDZRN3Q9UPQ7 1066 aa13.21□□□□□ -0.29
KCNMA1-225ENST00000626620 IRS2Q9Y4H2 1338 aa13.21□□□□□ -0.29
KCNMA1-225ENST00000626620 HSP90B1P14625 803 aaKnown RBP13.21□□□□□ -0.3
KCNMA1-225ENST00000626620 NPR1P16066 1061 aa13.21□□□□□ -0.3
KCNMA1-225ENST00000626620 MASTLQ96GX5 879 aa13.2□□□□□ -0.3
KCNMA1-225ENST00000626620 HDAC5Q9UQL6 1122 aa13.2□□□□□ -0.3
KCNMA1-225ENST00000626620 WDR90Q96KV7 1748 aa13.2□□□□□ -0.3
KCNMA1-225ENST00000626620 SRGAP3O43295 1099 aa13.2□□□□□ -0.3
KCNMA1-225ENST00000626620 GRAPQ13588 217 aa13.2□□□□□ -0.3
KCNMA1-225ENST00000626620 GRAPLQ8TC17 118 aaPredicted RBP13.2□□□□□ -0.3
KCNMA1-225ENST00000626620 PUS3Q9BZE2 481 aaKnown RBP13.2□□□□□ -0.3
KCNMA1-225ENST00000626620 DCTPP1Q9H773 170 aa13.2□□□□□ -0.3
KCNMA1-225ENST00000626620 PA2G4Q9UQ80 394 aaKnown RBP13.2□□□□□ -0.3
KCNMA1-225ENST00000626620 KIF3CO14782 793 aa13.2□□□□□ -0.3
KCNMA1-225ENST00000626620 C2CD5Q86YS7 1000 aa13.2□□□□□ -0.3
KCNMA1-225ENST00000626620 CCDC85AQ96PX6 553 aaPredicted RBP13.2□□□□□ -0.3
KCNMA1-225ENST00000626620 A0A0G2JLW4 131 aa13.19□□□□□ -0.3
KCNMA1-225ENST00000626620 GTF2E1P29083 439 aaPredicted RBP13.19□□□□□ -0.3
KCNMA1-225ENST00000626620 CIAO1O76071 339 aa13.19□□□□□ -0.3
KCNMA1-225ENST00000626620 SASH1O94885 1247 aa13.19□□□□□ -0.3
KCNMA1-225ENST00000626620 LRRC24Q50LG9 513 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 64.8 ms