RNA–Protein interactions for RNA: ENST00000625891.2

NRXN1-223, Transcript of neurexin 1, human

TSL 4 BASIC

Gene NRXN1, Length 1,164 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NRXN1-223	ENST00000625891	PRSS36	Q5K4E3	855 aa		10.22	□□□□□ -0.77
NRXN1-223	ENST00000625891	ZNF280C	Q8ND82	737 aa		10.22	□□□□□ -0.77
NRXN1-223	ENST00000625891	CHMP7	Q8WUX9	453 aa	Predicted RBP	10.22	□□□□□ -0.77
NRXN1-223	ENST00000625891	PHACTR1	Q9C0D0	580 aa		10.22	□□□□□ -0.77
NRXN1-223	ENST00000625891	GNE	Q9Y223	722 aa	Known RBP	10.22	□□□□□ -0.77
NRXN1-223	ENST00000625891	TRAPPC3L	Q5T215	181 aa		10.21	□□□□□ -0.77
NRXN1-223	ENST00000625891	ARTN	Q5T4W7	220 aa		10.21	□□□□□ -0.77
NRXN1-223	ENST00000625891	SUSD3	Q96L08	255 aa		10.21	□□□□□ -0.77
NRXN1-223	ENST00000625891	C9orf172	C9J069	976 aa		10.2	□□□□□ -0.78
NRXN1-223	ENST00000625891	LILRB5	O75023	590 aa		10.2	□□□□□ -0.78
NRXN1-223	ENST00000625891	MKNK1	Q9BUB5	465 aa		10.2	□□□□□ -0.78
NRXN1-223	ENST00000625891	CHMP3	Q9Y3E7	222 aa		10.2	□□□□□ -0.78
NRXN1-223	ENST00000625891	CCDC180	Q9P1Z9	1646 aa		10.19	□□□□□ -0.78
NRXN1-223	ENST00000625891	PTCD1	O75127	700 aa	Known RBP	10.19	□□□□□ -0.78
NRXN1-223	ENST00000625891	SELP	P16109	830 aa		10.19	□□□□□ -0.78
NRXN1-223	ENST00000625891	ADGRE1	Q14246	886 aa		10.19	□□□□□ -0.78
NRXN1-223	ENST00000625891	AEBP1	Q8IUX7	1158 aa		10.19	□□□□□ -0.78
NRXN1-223	ENST00000625891	BHMT	Q93088	406 aa		10.19	□□□□□ -0.78
NRXN1-223	ENST00000625891	ZFP64	Q9NPA5	681 aa		10.19	□□□□□ -0.78
NRXN1-223	ENST00000625891	SEPT3	Q9UH03	358 aa		10.19	□□□□□ -0.78
NRXN1-223	ENST00000625891		A0A0A0MRY4	1105 aa		10.18	□□□□□ -0.78
NRXN1-223	ENST00000625891	ARID4A	P29374	1257 aa	Predicted RBP	10.18	□□□□□ -0.78
NRXN1-223	ENST00000625891	MBTPS1	Q14703	1052 aa		10.18	□□□□□ -0.78
NRXN1-223	ENST00000625891	QTRT2	Q9H974	415 aa	Known RBP	10.18	□□□□□ -0.78
NRXN1-223	ENST00000625891	H2AFB1	P0C5Y9	115 aa		10.17	□□□□□ -0.78
NRXN1-223	ENST00000625891	H2AFB2	P0C5Z0	115 aa		10.17	□□□□□ -0.78
NRXN1-223	ENST00000625891	ELN	P15502	786 aa		10.17	□□□□□ -0.78
NRXN1-223	ENST00000625891	ALDH16A1	Q8IZ83	802 aa		10.16	□□□□□ -0.78
NRXN1-223	ENST00000625891	LENG1	Q96BZ8	264 aa	Predicted RBP	10.16	□□□□□ -0.78
NRXN1-223	ENST00000625891	MYO19	Q96H55	970 aa		10.16	□□□□□ -0.78
NRXN1-223	ENST00000625891	SLC6A14	Q9UN76	642 aa		10.16	□□□□□ -0.78
NRXN1-223	ENST00000625891	PATL2	C9JE40	543 aa	Known RBP	10.15	□□□□□ -0.78
NRXN1-223	ENST00000625891	SERPINB4	P48594	390 aa		10.15	□□□□□ -0.78
NRXN1-223	ENST00000625891	TRIM26	Q12899	539 aa	Predicted RBP	10.15	□□□□□ -0.78
NRXN1-223	ENST00000625891	BTLA	Q7Z6A9	289 aa		10.15	□□□□□ -0.78
NRXN1-223	ENST00000625891	UBE2O	Q9C0C9	1292 aa	Known RBP	10.15	□□□□□ -0.78
NRXN1-223	ENST00000625891	SAP130	Q9H0E3	1048 aa		10.15	□□□□□ -0.78
NRXN1-223	ENST00000625891	IVNS1ABP	Q9Y6Y0	642 aa		10.15	□□□□□ -0.78
NRXN1-223	ENST00000625891	TBC1D8B	Q0IIM8	1120 aa		10.14	□□□□□ -0.79
NRXN1-223	ENST00000625891	NAA30	Q147X3	362 aa	Predicted RBP	10.14	□□□□□ -0.79
NRXN1-223	ENST00000625891	TXNRD3	Q86VQ6	643 aa		10.14	□□□□□ -0.79
NRXN1-223	ENST00000625891	VTI1A	Q96AJ9	217 aa		10.14	□□□□□ -0.79
NRXN1-223	ENST00000625891	JPH1	Q9HDC5	661 aa	Predicted RBP	10.14	□□□□□ -0.79
NRXN1-223	ENST00000625891	LRFN2	Q9ULH4	789 aa		10.14	□□□□□ -0.79
NRXN1-223	ENST00000625891	RAC1	P63000	192 aa		10.13	□□□□□ -0.79
NRXN1-223	ENST00000625891	NRG1	Q02297	640 aa	Predicted RBP	10.13	□□□□□ -0.79
NRXN1-223	ENST00000625891	COX20	Q5RI15	118 aa		10.13	□□□□□ -0.79
NRXN1-223	ENST00000625891	SHISA2	Q6UWI4	295 aa		10.13	□□□□□ -0.79
NRXN1-223	ENST00000625891	ILDR2	Q71H61	639 aa		10.13	□□□□□ -0.79
NRXN1-223	ENST00000625891	CCER1	Q8TC90	406 aa	Predicted RBP	10.13	□□□□□ -0.79
NRXN1-223	ENST00000625891	GTF3C2	Q8WUA4	911 aa	Predicted RBP	10.13	□□□□□ -0.79
NRXN1-223	ENST00000625891	NUDT8	Q8WV74	236 aa		10.13	□□□□□ -0.79
NRXN1-223	ENST00000625891	IGFLR1	Q9H665	355 aa		10.13	□□□□□ -0.79
NRXN1-223	ENST00000625891	EFCC1	Q9HA90	598 aa		10.13	□□□□□ -0.79
NRXN1-223	ENST00000625891	RTN1	Q16799	776 aa		10.12	□□□□□ -0.79
NRXN1-223	ENST00000625891	C16orf46	Q6P387	395 aa		10.12	□□□□□ -0.79
NRXN1-223	ENST00000625891	NGLY1	Q96IV0	654 aa		10.12	□□□□□ -0.79
NRXN1-223	ENST00000625891	UTP3	Q9NQZ2	479 aa	Known RBP eCLIP	10.12	□□□□□ -0.79
NRXN1-223	ENST00000625891	EGFL7	Q9UHF1	273 aa		10.12	□□□□□ -0.79
NRXN1-223	ENST00000625891	TNFRSF10B	O14763	440 aa		10.11	□□□□□ -0.79
NRXN1-223	ENST00000625891	AFF1	P51825	1210 aa	Known RBP	10.11	□□□□□ -0.79
NRXN1-223	ENST00000625891	DNAJB12	Q9NXW2	375 aa	Known RBP	10.11	□□□□□ -0.79
NRXN1-223	ENST00000625891	MTMR7	Q9Y216	660 aa		10.11	□□□□□ -0.79
NRXN1-223	ENST00000625891	HIF1A	Q16665	826 aa		10.1	□□□□□ -0.79
NRXN1-223	ENST00000625891	PSAPL1	Q6NUJ1	521 aa		10.1	□□□□□ -0.79
NRXN1-223	ENST00000625891	HELQ	Q8TDG4	1101 aa		10.1	□□□□□ -0.79
NRXN1-223	ENST00000625891	GSX2	Q9BZM3	304 aa		10.1	□□□□□ -0.79
NRXN1-223	ENST00000625891	ECM1	Q16610	540 aa		10.09	□□□□□ -0.79
NRXN1-223	ENST00000625891	FAM26D	Q5JW98	314 aa		10.09	□□□□□ -0.79
NRXN1-223	ENST00000625891	NBPF11	Q86T75	865 aa		10.09	□□□□□ -0.79
NRXN1-223	ENST00000625891	FMR1NB	Q8N0W7	255 aa	Predicted RBP	10.09	□□□□□ -0.79
NRXN1-223	ENST00000625891	SSBP4	Q9BWG4	385 aa	Predicted RBP	10.09	□□□□□ -0.79
NRXN1-223	ENST00000625891	PODXL2	Q9NZ53	605 aa		10.09	□□□□□ -0.79
NRXN1-223	ENST00000625891	NAGPA	Q9UK23	515 aa		10.09	□□□□□ -0.79
NRXN1-223	ENST00000625891	NPR3	P17342	541 aa		10.08	□□□□□ -0.8
NRXN1-223	ENST00000625891	ZNF211	Q13398	564 aa	Predicted RBP	10.08	□□□□□ -0.8
NRXN1-223	ENST00000625891	LRP8	Q14114	963 aa		10.08	□□□□□ -0.8
NRXN1-223	ENST00000625891	DMRTC2	Q8IXT2	367 aa	Predicted RBP	10.08	□□□□□ -0.8
NRXN1-223	ENST00000625891	TP53INP1	Q96A56	240 aa		10.08	□□□□□ -0.8
NRXN1-223	ENST00000625891	BCS1L	Q9Y276	419 aa		10.08	□□□□□ -0.8
NRXN1-223	ENST00000625891	GTF3C5	Q9Y5Q8	519 aa	Predicted RBP	10.08	□□□□□ -0.8
NRXN1-223	ENST00000625891	ZBTB7C	A1YPR0	619 aa		10.07	□□□□□ -0.8
NRXN1-223	ENST00000625891	SOWAHD	A6NJG2	315 aa		10.07	□□□□□ -0.8
NRXN1-223	ENST00000625891	ICMT	O60725	284 aa		10.07	□□□□□ -0.8
NRXN1-223	ENST00000625891	DGKZ	Q13574	1117 aa		10.07	□□□□□ -0.8
NRXN1-223	ENST00000625891	MTMR3	Q13615	1198 aa		10.07	□□□□□ -0.8
NRXN1-223	ENST00000625891	IER5	Q5VY09	327 aa		10.07	□□□□□ -0.8
NRXN1-223	ENST00000625891	RGS9	O75916	674 aa	Predicted RBP	10.06	□□□□□ -0.8
NRXN1-223	ENST00000625891	ABL1	P00519	1130 aa		10.06	□□□□□ -0.8
NRXN1-223	ENST00000625891	CCIN	Q13939	588 aa		10.06	□□□□□ -0.8
NRXN1-223	ENST00000625891	C11orf91	Q3C1V1	193 aa		10.06	□□□□□ -0.8
NRXN1-223	ENST00000625891	PNMA5	Q96PV4	448 aa		10.06	□□□□□ -0.8
NRXN1-223	ENST00000625891	ANO2	Q9NQ90	1003 aa		10.06	□□□□□ -0.8
NRXN1-223	ENST00000625891	KLK14	Q9P0G3	267 aa		10.06	□□□□□ -0.8
NRXN1-223	ENST00000625891	USP21	Q9UK80	565 aa		10.06	□□□□□ -0.8
NRXN1-223	ENST00000625891	NFKB1	P19838	968 aa		10.05	□□□□□ -0.8
NRXN1-223	ENST00000625891	FKBP4	Q02790	459 aa	Known RBP eCLIP	10.05	□□□□□ -0.8
NRXN1-223	ENST00000625891	SF3B2	Q13435	895 aa	Known RBP	10.05	□□□□□ -0.8
NRXN1-223	ENST00000625891	KRTAP1-3	Q8IUG1	177 aa		10.05	□□□□□ -0.8
NRXN1-223	ENST00000625891	DMGDH	Q9UI17	866 aa	Known RBP	10.05	□□□□□ -0.8

Retrieved 100 of 20,778 RNA–protein pairs in 61.1 ms