RNA–Protein interactions for RNA: ENST00000625245.2

SMN1-211, Transcript of survival of motor neuron 1, telomeric, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SMN1, Length 885 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN1-211ENST00000625245 HDGFL1Q5TGJ6 251 aa24.74■■□□□ 1.55
SMN1-211ENST00000625245 PAXIP1Q6ZW49 1069 aaPredicted RBP24.74■■□□□ 1.55
SMN1-211ENST00000625245 PRDM10Q9NQV6 1147 aa24.74■■□□□ 1.55
SMN1-211ENST00000625245 GPRC5DQ9NZD1 345 aa24.74■■□□□ 1.55
SMN1-211ENST00000625245 WDR33Q9C0J8 1336 aaKnown RBP24.74■■□□□ 1.55
SMN1-211ENST00000625245 TRPM7Q96QT4 1865 aa24.73■■□□□ 1.55
SMN1-211ENST00000625245 TRAF5O00463 557 aa24.73■■□□□ 1.55
SMN1-211ENST00000625245 GRAPQ13588 217 aa24.73■■□□□ 1.55
SMN1-211ENST00000625245 GRAPLQ8TC17 118 aaPredicted RBP24.73■■□□□ 1.55
SMN1-211ENST00000625245 ADARB2Q9NS39 739 aaKnown RBP24.73■■□□□ 1.55
SMN1-211ENST00000625245 GMPSP49915 693 aaPredicted RBP24.72■■□□□ 1.55
SMN1-211ENST00000625245 LBX1P52954 281 aa24.72■■□□□ 1.55
SMN1-211ENST00000625245 RAD17O75943 681 aa24.71■■□□□ 1.55
SMN1-211ENST00000625245 GRM1Q13255 1194 aa24.71■■□□□ 1.55
SMN1-211ENST00000625245 CIAPIN1Q6FI81 312 aa24.71■■□□□ 1.55
SMN1-211ENST00000625245 ANKRD13DQ6ZTN6 518 aa24.71■■□□□ 1.55
SMN1-211ENST00000625245 PLBD2Q8NHP8 589 aa24.71■■□□□ 1.55
SMN1-211ENST00000625245 BCL2L13Q9BXK5 485 aa24.71■■□□□ 1.55
SMN1-211ENST00000625245 ADAMTS8Q9UP79 889 aa24.71■■□□□ 1.55
SMN1-211ENST00000625245 ATP5J2-PTCD1G3V325 749 aa24.7■■□□□ 1.54
SMN1-211ENST00000625245 KIAA2012Q0VF49 1180 aa24.7■■□□□ 1.54
SMN1-211ENST00000625245 MAP2K1Q02750 393 aaPredicted RBP24.69■■□□□ 1.54
SMN1-211ENST00000625245 TNIP1Q15025 636 aa24.69■■□□□ 1.54
SMN1-211ENST00000625245 FAM89AQ96GI7 184 aa24.69■■□□□ 1.54
SMN1-211ENST00000625245 DBF4Q9UBU7 674 aaPredicted RBP24.69■■□□□ 1.54
SMN1-211ENST00000625245 CST9Q5W186 159 aa24.68■■□□□ 1.54
SMN1-211ENST00000625245 CAPNS2Q96L46 248 aa24.68■■□□□ 1.54
SMN1-211ENST00000625245 HOXB7P09629 217 aa24.67■■□□□ 1.54
SMN1-211ENST00000625245 ECE1P42892 770 aa24.67■■□□□ 1.54
SMN1-211ENST00000625245 RTL5Q5HYW3 569 aaPredicted RBP24.67■■□□□ 1.54
SMN1-211ENST00000625245 CYP4F22Q6NT55 531 aa24.67■■□□□ 1.54
SMN1-211ENST00000625245 TMC4Q7Z404 712 aa24.67■■□□□ 1.54
SMN1-211ENST00000625245 ISCA1Q9BUE6 129 aa24.67■■□□□ 1.54
SMN1-211ENST00000625245 DDX60Q8IY21 1712 aaKnown RBP24.66■■□□□ 1.54
SMN1-211ENST00000625245 DUSP27Q5VZP5 1158 aa24.66■■□□□ 1.54
SMN1-211ENST00000625245 HSPA8P11142 646 aaKnown RBP24.65■■□□□ 1.54
SMN1-211ENST00000625245 CFAP44Q96MT7 982 aa24.65■■□□□ 1.54
SMN1-211ENST00000625245 GPR101Q96P66 508 aaPredicted RBP24.65■■□□□ 1.54
SMN1-211ENST00000625245 GLIS2Q9BZE0 524 aaPredicted RBP24.65■■□□□ 1.54
SMN1-211ENST00000625245 HYPKQ9NX55 129 aa24.65■■□□□ 1.54
SMN1-211ENST00000625245 NSFL1CQ9UNZ2 370 aaKnown RBP24.65■■□□□ 1.54
SMN1-211ENST00000625245 CELF1Q92879 486 aaKnown RBP24.64■■□□□ 1.54
SMN1-211ENST00000625245 CNOT7Q9UIV1 285 aaKnown RBP24.64■■□□□ 1.54
SMN1-211ENST00000625245 TLL2Q9Y6L7 1015 aa24.64■■□□□ 1.54
SMN1-211ENST00000625245 YDJCA8MPS7 323 aa24.63■■□□□ 1.53
SMN1-211ENST00000625245 CELF2O95319 508 aaKnown RBP24.63■■□□□ 1.53
SMN1-211ENST00000625245 SF3B3Q15393 1217 aaKnown RBP24.63■■□□□ 1.53
SMN1-211ENST00000625245 BEGAINQ9BUH8 593 aa24.63■■□□□ 1.53
SMN1-211ENST00000625245 MBIPQ9NS73 344 aa24.63■■□□□ 1.53
SMN1-211ENST00000625245 CDHR2Q9BYE9 1310 aa24.62■■□□□ 1.53
SMN1-211ENST00000625245 C6orf229H3BNL8 230 aa24.62■■□□□ 1.53
SMN1-211ENST00000625245 RIMBP2O15034 1052 aa24.62■■□□□ 1.53
SMN1-211ENST00000625245 HIRAP54198 1017 aaPredicted RBP24.62■■□□□ 1.53
SMN1-211ENST00000625245 WASHC4Q2M389 1173 aa24.62■■□□□ 1.53
SMN1-211ENST00000625245 ZNF408Q9H9D4 720 aa24.62■■□□□ 1.53
SMN1-211ENST00000625245 SHTN1A0MZ66 631 aa24.61■■□□□ 1.53
SMN1-211ENST00000625245 H7C1D1 291 aa24.61■■□□□ 1.53
SMN1-211ENST00000625245 IRS4O14654 1257 aaPredicted RBP24.61■■□□□ 1.53
SMN1-211ENST00000625245 RIC3Q7Z5B4 369 aa24.61■■□□□ 1.53
SMN1-211ENST00000625245 TRPM4Q8TD43 1214 aa24.61■■□□□ 1.53
SMN1-211ENST00000625245 DBNDD1Q9H9R9 158 aa24.61■■□□□ 1.53
SMN1-211ENST00000625245 DUOX1Q9NRD9 1551 aa24.61■■□□□ 1.53
SMN1-211ENST00000625245 LRRC37AA6NMS7 1700 aa24.61■■□□□ 1.53
SMN1-211ENST00000625245 ZC3H15Q8WU90 426 aaKnown RBP24.6■■□□□ 1.53
SMN1-211ENST00000625245 PGAP2Q9UHJ9 254 aa24.6■■□□□ 1.53
SMN1-211ENST00000625245 ZBTB12Q9Y330 459 aaPredicted RBP24.6■■□□□ 1.53
SMN1-211ENST00000625245 ELL2O00472 640 aaPredicted RBP24.59■■□□□ 1.53
SMN1-211ENST00000625245 AOC2O75106 756 aa24.59■■□□□ 1.53
SMN1-211ENST00000625245 GPSM2P81274 684 aa24.59■■□□□ 1.53
SMN1-211ENST00000625245 GOLGA2Q08379 1002 aa24.59■■□□□ 1.53
SMN1-211ENST00000625245 MICALL2Q8IY33 904 aa24.59■■□□□ 1.53
SMN1-211ENST00000625245 PSMD14O00487 310 aa24.58■■□□□ 1.53
SMN1-211ENST00000625245 APAF1O14727 1248 aa24.58■■□□□ 1.53
SMN1-211ENST00000625245 TRIM28Q13263 835 aaKnown RBP24.58■■□□□ 1.53
SMN1-211ENST00000625245 CDC37L1Q7L3B6 337 aa24.58■■□□□ 1.53
SMN1-211ENST00000625245 SAPCD2Q86UD0 394 aa24.58■■□□□ 1.53
SMN1-211ENST00000625245 POLLQ9UGP5 575 aa24.58■■□□□ 1.53
SMN1-211ENST00000625245 RPS8P62241 208 aaKnown RBP24.57■■□□□ 1.52
SMN1-211ENST00000625245 DOK7Q18PE1 504 aa24.57■■□□□ 1.52
SMN1-211ENST00000625245 PHAXQ9H814 394 aaKnown RBP24.57■■□□□ 1.52
SMN1-211ENST00000625245 ZNF853P0CG23 659 aa24.56■■□□□ 1.52
SMN1-211ENST00000625245 SAMD7Q7Z3H4 446 aa24.56■■□□□ 1.52
SMN1-211ENST00000625245 USP48Q86UV5 1035 aa24.56■■□□□ 1.52
SMN1-211ENST00000625245 EYA3Q99504 573 aa24.56■■□□□ 1.52
SMN1-211ENST00000625245 PRKRIP1Q9H875 184 aaPredicted RBP24.56■■□□□ 1.52
SMN1-211ENST00000625245 IFT57Q9NWB7 429 aa24.56■■□□□ 1.52
SMN1-211ENST00000625245 THSD7BQ9C0I4 1608 aa24.56■■□□□ 1.52
SMN1-211ENST00000625245 POLR2AP24928 1970 aaKnown RBP24.56■■□□□ 1.52
SMN1-211ENST00000625245 COL4A1P02462 1669 aa24.56■■□□□ 1.52
SMN1-211ENST00000625245 MAP2K2P36507 400 aa24.55■■□□□ 1.52
SMN1-211ENST00000625245 GNAI1P63096 354 aa24.55■■□□□ 1.52
SMN1-211ENST00000625245 ZBTB38Q8NAP3 1195 aaPredicted RBP24.55■■□□□ 1.52
SMN1-211ENST00000625245 DPF2Q92785 391 aa24.55■■□□□ 1.52
SMN1-211ENST00000625245 MYD88Q99836 296 aa24.55■■□□□ 1.52
SMN1-211ENST00000625245 TSKSQ9UJT2 592 aa24.55■■□□□ 1.52
SMN1-211ENST00000625245 ECE2O60344 883 aa24.54■■□□□ 1.52
SMN1-211ENST00000625245 CALD1Q05682 793 aaKnown RBP24.54■■□□□ 1.52
SMN1-211ENST00000625245 TBC1D10BQ4KMP7 808 aaPredicted RBP24.54■■□□□ 1.52
SMN1-211ENST00000625245 RBM26Q5T8P6 1007 aaKnown RBP24.54■■□□□ 1.52
SMN1-211ENST00000625245 TBC1D16Q8TBP0 767 aa24.54■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 187.8 ms