RNA–Protein interactions for RNA: ENST00000623185.3

LINC00963-216, long intergenic non-protein coding RNA 963, humanhuman

TSL 5 BASIC

Gene LINC00963, Length 786 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00963-216ENST00000623185 A0A0G2JLW4 131 aa15.61■□□□□ 0.09
LINC00963-216ENST00000623185 C3orf67Q6ZVT6 689 aa15.61■□□□□ 0.09
LINC00963-216ENST00000623185 BICC1Q9H694 974 aaKnown RBP15.61■□□□□ 0.09
LINC00963-216ENST00000623185 LRRFIP2Q9Y608 721 aaKnown RBP15.61■□□□□ 0.09
LINC00963-216ENST00000623185 BBOX1O75936 387 aa15.6■□□□□ 0.09
LINC00963-216ENST00000623185 DPEP1P16444 411 aa15.6■□□□□ 0.09
LINC00963-216ENST00000623185 ATP8B2P98198 1209 aa15.6■□□□□ 0.09
LINC00963-216ENST00000623185 MTX1Q13505 466 aa15.6■□□□□ 0.09
LINC00963-216ENST00000623185 DDX46Q7L014 1031 aaKnown RBP15.6■□□□□ 0.09
LINC00963-216ENST00000623185 RPAP2Q8IXW5 612 aaPredicted RBP15.6■□□□□ 0.09
LINC00963-216ENST00000623185 ANKRD44Q8N8A2 993 aa15.6■□□□□ 0.09
LINC00963-216ENST00000623185 RPGRQ92834 1020 aaKnown RBP15.6■□□□□ 0.09
LINC00963-216ENST00000623185 CNKSR1Q969H4 720 aa15.6■□□□□ 0.09
LINC00963-216ENST00000623185 CRBNQ96SW2 442 aa15.6■□□□□ 0.09
LINC00963-216ENST00000623185 PIM2Q9P1W9 311 aa15.6■□□□□ 0.09
LINC00963-216ENST00000623185 CHRNA5P30532 468 aa15.59■□□□□ 0.09
LINC00963-216ENST00000623185 RTL9Q8NET4 1388 aa15.59■□□□□ 0.09
LINC00963-216ENST00000623185 RPS8P62241 208 aaKnown RBP15.58■□□□□ 0.08
LINC00963-216ENST00000623185 IFIT5Q13325 482 aaKnown RBP15.58■□□□□ 0.08
LINC00963-216ENST00000623185 CCDC57Q2TAC2 916 aa15.58■□□□□ 0.08
LINC00963-216ENST00000623185 KLHL34Q8N239 644 aa15.58■□□□□ 0.08
LINC00963-216ENST00000623185 ZNF622Q969S3 477 aaKnown RBP eCLIP15.58■□□□□ 0.08
LINC00963-216ENST00000623185 GREM2Q9H772 168 aa15.58■□□□□ 0.08
LINC00963-216ENST00000623185 AFDNP55196 1824 aaKnown RBP15.58■□□□□ 0.08
LINC00963-216ENST00000623185 ANKRD18BA2A2Z9 1011 aa15.57■□□□□ 0.08
LINC00963-216ENST00000623185 ITGA6P23229 1130 aa15.57■□□□□ 0.08
LINC00963-216ENST00000623185 TTLL6Q8N841 843 aa15.57■□□□□ 0.08
LINC00963-216ENST00000623185 CDC5LQ99459 802 aaKnown RBP15.57■□□□□ 0.08
LINC00963-216ENST00000623185 GRAPQ13588 217 aa15.56■□□□□ 0.08
LINC00963-216ENST00000623185 TMC4Q7Z404 712 aa15.56■□□□□ 0.08
LINC00963-216ENST00000623185 NLGN2Q8NFZ4 835 aa15.56■□□□□ 0.08
LINC00963-216ENST00000623185 EXOC6Q8TAG9 804 aa15.56■□□□□ 0.08
LINC00963-216ENST00000623185 GRAPLQ8TC17 118 aaPredicted RBP15.56■□□□□ 0.08
LINC00963-216ENST00000623185 SEC31BQ9NQW1 1179 aa15.56■□□□□ 0.08
LINC00963-216ENST00000623185 SRGAP3O43295 1099 aa15.55■□□□□ 0.08
LINC00963-216ENST00000623185 ANKRD18AQ8IVF6 992 aa15.55■□□□□ 0.08
LINC00963-216ENST00000623185 SSH3Q8TE77 659 aa15.55■□□□□ 0.08
LINC00963-216ENST00000623185 CCDC85AQ96PX6 553 aaPredicted RBP15.55■□□□□ 0.08
LINC00963-216ENST00000623185 CHMP3Q9Y3E7 222 aa15.55■□□□□ 0.08
LINC00963-216ENST00000623185 RFX5P48382 616 aaPredicted RBP15.54■□□□□ 0.08
LINC00963-216ENST00000623185 POLA2Q14181 598 aa15.54■□□□□ 0.08
LINC00963-216ENST00000623185 FAM161AQ3B820 660 aa15.54■□□□□ 0.08
LINC00963-216ENST00000623185 DALRD3Q5D0E6 543 aaKnown RBP15.54■□□□□ 0.08
LINC00963-216ENST00000623185 CEP85Q6P2H3 762 aa15.54■□□□□ 0.08
LINC00963-216ENST00000623185 SP8Q8IXZ3 490 aa15.54■□□□□ 0.08
LINC00963-216ENST00000623185 C7orf43Q8WVR3 580 aa15.54■□□□□ 0.08
LINC00963-216ENST00000623185 CELF1Q92879 486 aaKnown RBP15.54■□□□□ 0.08
LINC00963-216ENST00000623185 C1orf115Q9H7X2 142 aa15.54■□□□□ 0.08
LINC00963-216ENST00000623185 BSDC1Q9NW68 430 aaPredicted RBP15.54■□□□□ 0.08
LINC00963-216ENST00000623185 FBXO3Q9UK99 471 aa15.54■□□□□ 0.08
LINC00963-216ENST00000623185 PNMA6EA0A0J9YXQ4 647 aa15.53■□□□□ 0.08
LINC00963-216ENST00000623185 IGHMBP2P38935 993 aaKnown RBP15.53■□□□□ 0.08
LINC00963-216ENST00000623185 PTPN12Q05209 780 aaKnown RBP15.53■□□□□ 0.08
LINC00963-216ENST00000623185 GRIPAP1Q4V328 841 aa15.53■□□□□ 0.08
LINC00963-216ENST00000623185 CC2D2BQ6DHV5 1058 aa15.53■□□□□ 0.08
LINC00963-216ENST00000623185 COPRSQ9NQ92 184 aa15.53■□□□□ 0.08
LINC00963-216ENST00000623185 N4BP2Q86UW6 1770 aaPredicted RBP15.53■□□□□ 0.08
LINC00963-216ENST00000623185 LRP5O75197 1615 aa15.53■□□□□ 0.08
LINC00963-216ENST00000623185 KIF13BQ9NQT8 1826 aa15.52■□□□□ 0.08
LINC00963-216ENST00000623185 HMMRO75330 724 aa15.52■□□□□ 0.08
LINC00963-216ENST00000623185 IRX6P78412 446 aaPredicted RBP15.52■□□□□ 0.08
LINC00963-216ENST00000623185 TAF7LQ5H9L4 462 aa15.52■□□□□ 0.08
LINC00963-216ENST00000623185 PRPF40BQ6NWY9 871 aaKnown RBP15.52■□□□□ 0.08
LINC00963-216ENST00000623185 LDHAL6AQ6ZMR3 332 aa15.52■□□□□ 0.08
LINC00963-216ENST00000623185 SIRT2Q8IXJ6 389 aa15.52■□□□□ 0.08
LINC00963-216ENST00000623185 MPHOSPH8Q99549 860 aa15.52■□□□□ 0.08
LINC00963-216ENST00000623185 TMX4Q9H1E5 349 aaPredicted RBP15.52■□□□□ 0.08
LINC00963-216ENST00000623185 ATP6V0A2Q9Y487 856 aa15.52■□□□□ 0.08
LINC00963-216ENST00000623185 PCDHB15Q9Y5E8 787 aa15.52■□□□□ 0.08
LINC00963-216ENST00000623185 NEFLP07196 543 aa15.51■□□□□ 0.07
LINC00963-216ENST00000623185 SOGA3Q5TF21 947 aa15.51■□□□□ 0.07
LINC00963-216ENST00000623185 ERICH6BQ5W0A0 696 aa15.51■□□□□ 0.07
LINC00963-216ENST00000623185 ANKRD31Q8N7Z5 1873 aa15.5■□□□□ 0.07
LINC00963-216ENST00000623185 PPEF1O14829 653 aaPredicted RBP15.5■□□□□ 0.07
LINC00963-216ENST00000623185 CIAO1O76071 339 aa15.5■□□□□ 0.07
LINC00963-216ENST00000623185 ZNF594Q96JF6 807 aaPredicted RBP15.5■□□□□ 0.07
LINC00963-216ENST00000623185 MINPP1Q9UNW1 487 aa15.5■□□□□ 0.07
LINC00963-216ENST00000623185 NOP58Q9Y2X3 529 aaKnown RBP15.5■□□□□ 0.07
LINC00963-216ENST00000623185 RIPOR2Q9Y4F9 1068 aa15.5■□□□□ 0.07
LINC00963-216ENST00000623185 DDX60Q8IY21 1712 aaKnown RBP15.5■□□□□ 0.07
LINC00963-216ENST00000623185 EYA2O00167 538 aa15.49■□□□□ 0.07
LINC00963-216ENST00000623185 RTKN2Q8IZC4 609 aa15.49■□□□□ 0.07
LINC00963-216ENST00000623185 BCS1LQ9Y276 419 aa15.49■□□□□ 0.07
LINC00963-216ENST00000623185 C21orf2O43822 256 aa15.48■□□□□ 0.07
LINC00963-216ENST00000623185 KLHDC4Q8TBB5 520 aa15.48■□□□□ 0.07
LINC00963-216ENST00000623185 ANKRD2Q9GZV1 360 aa15.48■□□□□ 0.07
LINC00963-216ENST00000623185 CNNM1Q9NRU3 951 aa15.48■□□□□ 0.07
LINC00963-216ENST00000623185 TNRC6CQ9HCJ0 1690 aaKnown RBP15.48■□□□□ 0.07
LINC00963-216ENST00000623185 SURF6O75683 361 aaKnown RBP15.47■□□□□ 0.07
LINC00963-216ENST00000623185 IL15P40933 162 aaPredicted RBP15.47■□□□□ 0.07
LINC00963-216ENST00000623185 G3BP1Q13283 466 aaKnown RBP eCLIP15.47■□□□□ 0.07
LINC00963-216ENST00000623185 HDAC1Q13547 482 aaPredicted RBP15.47■□□□□ 0.07
LINC00963-216ENST00000623185 HSP90AB4PQ58FF6 505 aa15.47■□□□□ 0.07
LINC00963-216ENST00000623185 ATG9AQ7Z3C6 839 aa15.47■□□□□ 0.07
LINC00963-216ENST00000623185 PUS3Q9BZE2 481 aaKnown RBP15.47■□□□□ 0.07
LINC00963-216ENST00000623185 RWDD1Q9H446 243 aaPredicted RBP15.47■□□□□ 0.07
LINC00963-216ENST00000623185 PODXL2Q9NZ53 605 aa15.47■□□□□ 0.07
LINC00963-216ENST00000623185 MROH5Q6ZUA9 1318 aa15.46■□□□□ 0.07
LINC00963-216ENST00000623185 LRRC24Q50LG9 513 aa15.46■□□□□ 0.07
LINC00963-216ENST00000623185 MPNDQ8N594 471 aa15.46■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms