RNA–Protein interactions for RNA: ENST00000622493.4

CLTCL1-212, Transcript of clathrin heavy chain like 1, humanhuman

TSL 2 BASIC

Gene CLTCL1, Length 1,714 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-212ENST00000622493 NFIXQ14938 502 aa17.54■□□□□ 0.4
CLTCL1-212ENST00000622493 PLEKHM2Q8IWE5 1019 aa17.54■□□□□ 0.4
CLTCL1-212ENST00000622493 DDX60Q8IY21 1712 aaKnown RBP17.54■□□□□ 0.4
CLTCL1-212ENST00000622493 CIAO1O76071 339 aa17.53■□□□□ 0.4
CLTCL1-212ENST00000622493 NUTM1Q86Y26 1132 aa17.53■□□□□ 0.4
CLTCL1-212ENST00000622493 CLASRPQ8N2M8 674 aaKnown RBP17.53■□□□□ 0.4
CLTCL1-212ENST00000622493 KLHDC4Q8TBB5 520 aa17.53■□□□□ 0.4
CLTCL1-212ENST00000622493 SIL1Q9H173 461 aa17.53■□□□□ 0.4
CLTCL1-212ENST00000622493 RTL9Q8NET4 1388 aa17.53■□□□□ 0.4
CLTCL1-212ENST00000622493 ANKRD18BA2A2Z9 1011 aa17.52■□□□□ 0.4
CLTCL1-212ENST00000622493 SASH1O94885 1247 aa17.52■□□□□ 0.4
CLTCL1-212ENST00000622493 HCLS1P14317 486 aaPredicted RBP17.52■□□□□ 0.4
CLTCL1-212ENST00000622493 SLC15A2Q16348 729 aa17.52■□□□□ 0.4
CLTCL1-212ENST00000622493 FAM161AQ3B820 660 aa17.52■□□□□ 0.4
CLTCL1-212ENST00000622493 COL23A1Q86Y22 540 aaPredicted RBP17.52■□□□□ 0.4
CLTCL1-212ENST00000622493 C16orf71Q8IYS4 520 aaPredicted RBP17.52■□□□□ 0.4
CLTCL1-212ENST00000622493 NLGN1Q8N2Q7 840 aa17.52■□□□□ 0.4
CLTCL1-212ENST00000622493 OSBPL3Q9H4L5 887 aa17.52■□□□□ 0.4
CLTCL1-212ENST00000622493 STK32BQ9NY57 414 aa17.52■□□□□ 0.4
CLTCL1-212ENST00000622493 TUBGCP6Q96RT7 1819 aa17.52■□□□□ 0.4
CLTCL1-212ENST00000622493 ITGA6P23229 1130 aa17.52■□□□□ 0.39
CLTCL1-212ENST00000622493 TM4SF1P30408 202 aa17.52■□□□□ 0.39
CLTCL1-212ENST00000622493 IL15P40933 162 aaPredicted RBP17.52■□□□□ 0.39
CLTCL1-212ENST00000622493 ERFEQ4G0M1 354 aa17.52■□□□□ 0.39
CLTCL1-212ENST00000622493 CCDC152Q4G0S7 254 aa17.52■□□□□ 0.39
CLTCL1-212ENST00000622493 GREM2Q9H772 168 aa17.52■□□□□ 0.39
CLTCL1-212ENST00000622493 IL1RAPL2Q9NP60 686 aa17.52■□□□□ 0.39
CLTCL1-212ENST00000622493 EYA2O00167 538 aa17.51■□□□□ 0.39
CLTCL1-212ENST00000622493 SF3B3Q15393 1217 aaKnown RBP17.51■□□□□ 0.39
CLTCL1-212ENST00000622493 TAF7LQ5H9L4 462 aa17.51■□□□□ 0.39
CLTCL1-212ENST00000622493 QSER1Q2KHR3 1735 aa17.5■□□□□ 0.39
CLTCL1-212ENST00000622493 PNPLA7Q6ZV29 1317 aa17.5■□□□□ 0.39
CLTCL1-212ENST00000622493 SALL3Q9BXA9 1300 aa17.5■□□□□ 0.39
CLTCL1-212ENST00000622493 BMP2KLQ5H9B9 411 aa17.5■□□□□ 0.39
CLTCL1-212ENST00000622493 DEFB132Q7Z7B7 95 aa17.5■□□□□ 0.39
CLTCL1-212ENST00000622493 MX1P20591 662 aa17.5■□□□□ 0.39
CLTCL1-212ENST00000622493 NLRP3Q96P20 1036 aa17.5■□□□□ 0.39
CLTCL1-212ENST00000622493 CCDC85AQ96PX6 553 aaPredicted RBP17.5■□□□□ 0.39
CLTCL1-212ENST00000622493 STAP2Q9UGK3 403 aa17.5■□□□□ 0.39
CLTCL1-212ENST00000622493 NPHP1O15259 732 aa17.49■□□□□ 0.39
CLTCL1-212ENST00000622493 MSH5O43196 834 aa17.49■□□□□ 0.39
CLTCL1-212ENST00000622493 PDE1AP54750 535 aa17.49■□□□□ 0.39
CLTCL1-212ENST00000622493 ATG9AQ7Z3C6 839 aa17.49■□□□□ 0.39
CLTCL1-212ENST00000622493 CNBD1Q8NA66 436 aa17.49■□□□□ 0.39
CLTCL1-212ENST00000622493 ANO8Q9HCE9 1232 aaPredicted RBP17.49■□□□□ 0.39
CLTCL1-212ENST00000622493 RBM19Q9Y4C8 960 aaKnown RBP17.49■□□□□ 0.39
CLTCL1-212ENST00000622493 RIC1Q4ADV7 1423 aa17.49■□□□□ 0.39
CLTCL1-212ENST00000622493 AOX1Q06278 1338 aa17.48■□□□□ 0.39
CLTCL1-212ENST00000622493 OTUD7AQ8TE49 926 aaPredicted RBP17.48■□□□□ 0.39
CLTCL1-212ENST00000622493 ZNF594Q96JF6 807 aaPredicted RBP17.48■□□□□ 0.39
CLTCL1-212ENST00000622493 BCL11AQ9H165 835 aa17.48■□□□□ 0.39
CLTCL1-212ENST00000622493 GPR108Q9NPR9 543 aa17.48■□□□□ 0.39
CLTCL1-212ENST00000622493 ABCC12Q96J65 1359 aa17.48■□□□□ 0.39
CLTCL1-212ENST00000622493 SERPINB2P05120 415 aa17.47■□□□□ 0.39
CLTCL1-212ENST00000622493 LDHAL6AQ6ZMR3 332 aa17.47■□□□□ 0.39
CLTCL1-212ENST00000622493 IFIT2P09913 472 aaKnown RBP17.47■□□□□ 0.39
CLTCL1-212ENST00000622493 TTC22Q5TAA0 569 aa17.47■□□□□ 0.39
CLTCL1-212ENST00000622493 TTC41PQ6P2S7 1318 aa17.46■□□□□ 0.39
CLTCL1-212ENST00000622493 POLRMTO00411 1230 aaKnown RBP17.46■□□□□ 0.39
CLTCL1-212ENST00000622493 ST5P78524 1137 aa17.46■□□□□ 0.39
CLTCL1-212ENST00000622493 TFCP2Q12800 502 aa17.46■□□□□ 0.39
CLTCL1-212ENST00000622493 LRRC24Q50LG9 513 aa17.46■□□□□ 0.39
CLTCL1-212ENST00000622493 PRR5LQ6MZQ0 368 aa17.46■□□□□ 0.39
CLTCL1-212ENST00000622493 AACSQ86V21 672 aa17.46■□□□□ 0.39
CLTCL1-212ENST00000622493 CDC5LQ99459 802 aaKnown RBP17.46■□□□□ 0.39
CLTCL1-212ENST00000622493 BACH2Q9BYV9 841 aa17.46■□□□□ 0.39
CLTCL1-212ENST00000622493 CEP126Q9P2H0 1117 aa17.46■□□□□ 0.39
CLTCL1-212ENST00000622493 TNNI3KQ59H18 835 aa17.45■□□□□ 0.38
CLTCL1-212ENST00000622493 EAF2Q96CJ1 260 aaPredicted RBP17.45■□□□□ 0.38
CLTCL1-212ENST00000622493 GPATCH3Q96I76 525 aa17.45■□□□□ 0.38
CLTCL1-212ENST00000622493 PUS3Q9BZE2 481 aaKnown RBP17.45■□□□□ 0.38
CLTCL1-212ENST00000622493 RIPOR2Q9Y4F9 1068 aa17.45■□□□□ 0.38
CLTCL1-212ENST00000622493 FPGT-TNNI3KV9GXZ4 949 aa17.45■□□□□ 0.38
CLTCL1-212ENST00000622493 LRP5O75197 1615 aa17.44■□□□□ 0.38
CLTCL1-212ENST00000622493 IGHMBP2P38935 993 aaKnown RBP17.44■□□□□ 0.38
CLTCL1-212ENST00000622493 DDR1Q08345 913 aa17.44■□□□□ 0.38
CLTCL1-212ENST00000622493 C8orf34Q49A92 452 aa17.44■□□□□ 0.38
CLTCL1-212ENST00000622493 MPHOSPH8Q99549 860 aa17.44■□□□□ 0.38
CLTCL1-212ENST00000622493 CNNM1Q9NRU3 951 aa17.44■□□□□ 0.38
CLTCL1-212ENST00000622493 AKAP2Q9Y2D5 859 aa17.44■□□□□ 0.38
CLTCL1-212ENST00000622493 ERC2O15083 957 aa17.44■□□□□ 0.38
CLTCL1-212ENST00000622493 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP17.44■□□□□ 0.38
CLTCL1-212ENST00000622493 MROH5Q6ZUA9 1318 aa17.43■□□□□ 0.38
CLTCL1-212ENST00000622493 CASZ1Q86V15 1759 aa17.43■□□□□ 0.38
CLTCL1-212ENST00000622493 SEC31BQ9NQW1 1179 aa17.43■□□□□ 0.38
CLTCL1-212ENST00000622493 ECHDC1Q9NTX5 307 aa17.43■□□□□ 0.38
CLTCL1-212ENST00000622493 GSPT1P15170 499 aaKnown RBP17.42■□□□□ 0.38
CLTCL1-212ENST00000622493 C3orf67Q6ZVT6 689 aa17.42■□□□□ 0.38
CLTCL1-212ENST00000622493 ANKRD18AQ8IVF6 992 aa17.42■□□□□ 0.38
CLTCL1-212ENST00000622493 NRXN2Q9P2S2 1712 aa17.42■□□□□ 0.38
CLTCL1-212ENST00000622493 GLRX3O76003 335 aaKnown RBP17.41■□□□□ 0.38
CLTCL1-212ENST00000622493 CCDC8Q9H0W5 538 aaPredicted RBP17.41■□□□□ 0.38
CLTCL1-212ENST00000622493 PARP3Q9Y6F1 533 aa17.41■□□□□ 0.38
CLTCL1-212ENST00000622493 MMP10P09238 476 aa17.41■□□□□ 0.38
CLTCL1-212ENST00000622493 METTL24Q5JXM2 366 aa17.41■□□□□ 0.38
CLTCL1-212ENST00000622493 DDX46Q7L014 1031 aaKnown RBP17.41■□□□□ 0.38
CLTCL1-212ENST00000622493 PI4K2BQ8TCG2 481 aa17.41■□□□□ 0.38
CLTCL1-212ENST00000622493 SLC16A10Q8TF71 515 aa17.41■□□□□ 0.38
CLTCL1-212ENST00000622493 BSDC1Q9NW68 430 aaPredicted RBP17.41■□□□□ 0.38
CLTCL1-212ENST00000622493 PDE8BO95263 885 aa17.4■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms