RNA–Protein interactions for RNA: ENST00000621016.4

CDH1-214, Transcript of cadherin 1, humanhuman

TSL 5 BASIC

Gene CDH1, Length 3,304 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-214ENST00000621016 V9GYY5 206 aaPredicted RBP12.67□□□□□ -0.38
CDH1-214ENST00000621016 SSH2Q76I76 1423 aa12.66□□□□□ -0.38
CDH1-214ENST00000621016 ADCY9O60503 1353 aa12.66□□□□□ -0.38
CDH1-214ENST00000621016 A0A0D9SFI3 127 aa12.66□□□□□ -0.38
CDH1-214ENST00000621016 GOLGA6L4A6NEF3 574 aa12.66□□□□□ -0.38
CDH1-214ENST00000621016 UBE3BQ7Z3V4 1068 aa12.66□□□□□ -0.38
CDH1-214ENST00000621016 RAPGEF4Q8WZA2 1011 aa12.66□□□□□ -0.38
CDH1-214ENST00000621016 SASH1O94885 1247 aa12.66□□□□□ -0.38
CDH1-214ENST00000621016 SEC62Q99442 399 aaKnown RBP12.66□□□□□ -0.38
CDH1-214ENST00000621016 SETD1AO15047 1707 aaKnown RBP12.66□□□□□ -0.38
CDH1-214ENST00000621016 TRIM66O15016 1216 aa12.65□□□□□ -0.38
CDH1-214ENST00000621016 HNRNPH2P55795 449 aaKnown RBP12.65□□□□□ -0.38
CDH1-214ENST00000621016 NEXNQ0ZGT2 675 aa12.65□□□□□ -0.38
CDH1-214ENST00000621016 HYPKQ9NX55 129 aa12.65□□□□□ -0.38
CDH1-214ENST00000621016 F13A1P00488 732 aa12.65□□□□□ -0.38
CDH1-214ENST00000621016 MMP14P50281 582 aa12.65□□□□□ -0.38
CDH1-214ENST00000621016 EPHA10Q5JZY3 1008 aa12.65□□□□□ -0.38
CDH1-214ENST00000621016 HOMEZQ8IX15 550 aa12.65□□□□□ -0.38
CDH1-214ENST00000621016 DRC1Q96MC2 740 aa12.65□□□□□ -0.38
CDH1-214ENST00000621016 TPCN1Q9ULQ1 816 aa12.65□□□□□ -0.38
CDH1-214ENST00000621016 MON2Q7Z3U7 1717 aa12.65□□□□□ -0.38
CDH1-214ENST00000621016 ADCY5O95622 1261 aa12.65□□□□□ -0.38
CDH1-214ENST00000621016 DDX46Q7L014 1031 aaKnown RBP12.65□□□□□ -0.38
CDH1-214ENST00000621016 CALCOCO1Q9P1Z2 691 aa12.65□□□□□ -0.38
CDH1-214ENST00000621016 USP16Q9Y5T5 823 aa12.65□□□□□ -0.38
CDH1-214ENST00000621016 KDM4AO75164 1064 aa12.64□□□□□ -0.39
CDH1-214ENST00000621016 CREB3L3Q68CJ9 461 aa12.64□□□□□ -0.39
CDH1-214ENST00000621016 ZNF589Q86UQ0 364 aaPredicted RBP12.64□□□□□ -0.39
CDH1-214ENST00000621016 PROSER2Q86WR7 435 aaPredicted RBP12.64□□□□□ -0.39
CDH1-214ENST00000621016 DDX58O95786 925 aaKnown RBP12.64□□□□□ -0.39
CDH1-214ENST00000621016 HMGN5P82970 282 aaKnown RBP12.64□□□□□ -0.39
CDH1-214ENST00000621016 TERF2Q15554 542 aa12.64□□□□□ -0.39
CDH1-214ENST00000621016 RGPD8O14715 1765 aaPredicted RBP12.64□□□□□ -0.39
CDH1-214ENST00000621016 PHF14O94880 888 aa12.64□□□□□ -0.39
CDH1-214ENST00000621016 KCNH5Q8NCM2 988 aa12.64□□□□□ -0.39
CDH1-214ENST00000621016 OGFRQ9NZT2 677 aa12.64□□□□□ -0.39
CDH1-214ENST00000621016 CDC37L1Q7L3B6 337 aa12.63□□□□□ -0.39
CDH1-214ENST00000621016 CHST3Q7LGC8 479 aa12.63□□□□□ -0.39
CDH1-214ENST00000621016 KRT28Q7Z3Y7 464 aa12.63□□□□□ -0.39
CDH1-214ENST00000621016 TTC14Q96N46 770 aa12.63□□□□□ -0.39
CDH1-214ENST00000621016 E2F4Q16254 413 aa12.63□□□□□ -0.39
CDH1-214ENST00000621016 BLOC1S2Q6QNY1 142 aa12.63□□□□□ -0.39
CDH1-214ENST00000621016 TTC5Q8N0Z6 440 aa12.63□□□□□ -0.39
CDH1-214ENST00000621016 KAZALD1Q96I82 304 aa12.63□□□□□ -0.39
CDH1-214ENST00000621016 ZNF496Q96IT1 587 aaPredicted RBP12.63□□□□□ -0.39
CDH1-214ENST00000621016 CNKSR2Q8WXI2 1034 aa12.62□□□□□ -0.39
CDH1-214ENST00000621016 EVI5LQ96CN4 794 aa12.62□□□□□ -0.39
CDH1-214ENST00000621016 NRKQ7Z2Y5 1582 aa12.62□□□□□ -0.39
CDH1-214ENST00000621016 A0A0G2JS52 829 aa12.62□□□□□ -0.39
CDH1-214ENST00000621016 IGKV5-2P06315 115 aa12.62□□□□□ -0.39
CDH1-214ENST00000621016 GUCY1B3Q02153 619 aa12.62□□□□□ -0.39
CDH1-214ENST00000621016 DRC7Q8IY82 874 aa12.62□□□□□ -0.39
CDH1-214ENST00000621016 LINS1Q8NG48 757 aa12.62□□□□□ -0.39
CDH1-214ENST00000621016 ZNF622Q969S3 477 aaKnown RBP eCLIP12.62□□□□□ -0.39
CDH1-214ENST00000621016 CCDC171Q6TFL3 1326 aa12.62□□□□□ -0.39
CDH1-214ENST00000621016 RPAP1Q9BWH6 1393 aaPredicted RBP12.62□□□□□ -0.39
CDH1-214ENST00000621016 JAK2O60674 1132 aa12.62□□□□□ -0.39
CDH1-214ENST00000621016 RAD51AP2Q09MP3 1159 aa12.62□□□□□ -0.39
CDH1-214ENST00000621016 TFCP2Q12800 502 aa12.62□□□□□ -0.39
CDH1-214ENST00000621016 CCDC183Q5T5S1 534 aa12.62□□□□□ -0.39
CDH1-214ENST00000621016 ZNF790Q6PG37 636 aa12.61□□□□□ -0.39
CDH1-214ENST00000621016 MTMR6Q9Y217 621 aa12.61□□□□□ -0.39
CDH1-214ENST00000621016 DIP2AQ14689 1571 aa12.61□□□□□ -0.39
CDH1-214ENST00000621016 A0A087WZG4 1122 aa12.61□□□□□ -0.39
CDH1-214ENST00000621016 SLC27A2O14975 620 aa12.61□□□□□ -0.39
CDH1-214ENST00000621016 AMOTQ4VCS5 1084 aa12.61□□□□□ -0.39
CDH1-214ENST00000621016 RAB11FIP4Q86YS3 637 aa12.61□□□□□ -0.39
CDH1-214ENST00000621016 PDLIM2Q96JY6 352 aa12.61□□□□□ -0.39
CDH1-214ENST00000621016 PRIMPOLQ96LW4 560 aa12.61□□□□□ -0.39
CDH1-214ENST00000621016 A0A087WWV3 80 aa12.6□□□□□ -0.39
CDH1-214ENST00000621016 UBE2HP62256 183 aa12.6□□□□□ -0.39
CDH1-214ENST00000621016 CHAF1AQ13111 956 aaPredicted RBP12.6□□□□□ -0.39
CDH1-214ENST00000621016 LARP1Q6PKG0 1096 aaKnown RBP12.6□□□□□ -0.39
CDH1-214ENST00000621016 GEMIN8Q9NWZ8 242 aaKnown RBP12.6□□□□□ -0.39
CDH1-214ENST00000621016 ATP6V1DQ9Y5K8 247 aa12.6□□□□□ -0.39
CDH1-214ENST00000621016 TIMM10P62072 90 aa12.6□□□□□ -0.39
CDH1-214ENST00000621016 SLC20A2Q08357 652 aa12.6□□□□□ -0.39
CDH1-214ENST00000621016 HS1BP3Q53T59 392 aa12.6□□□□□ -0.39
CDH1-214ENST00000621016 ANKRD13DQ6ZTN6 518 aa12.6□□□□□ -0.39
CDH1-214ENST00000621016 ARHGEF25Q86VW2 580 aa12.6□□□□□ -0.39
CDH1-214ENST00000621016 BICD2Q8TD16 824 aa12.6□□□□□ -0.39
CDH1-214ENST00000621016 DHX16O60231 1041 aaKnown RBP12.6□□□□□ -0.39
CDH1-214ENST00000621016 CCT2P78371 535 aaKnown RBP12.6□□□□□ -0.39
CDH1-214ENST00000621016 ERC1Q8IUD2 1116 aa12.6□□□□□ -0.39
CDH1-214ENST00000621016 DBNDD2Q9BQY9 259 aa12.6□□□□□ -0.39
CDH1-214ENST00000621016 AKAP12Q02952 1782 aa12.6□□□□□ -0.39
CDH1-214ENST00000621016 TTC41PQ6P2S7 1318 aa12.59□□□□□ -0.39
CDH1-214ENST00000621016 H3BQV1 296 aa12.59□□□□□ -0.39
CDH1-214ENST00000621016 LIG1P18858 919 aa12.59□□□□□ -0.39
CDH1-214ENST00000621016 IFFO2Q5TF58 517 aa12.59□□□□□ -0.39
CDH1-214ENST00000621016 NEK11Q8NG66 645 aa12.59□□□□□ -0.39
CDH1-214ENST00000621016 DDX21Q9NR30 783 aaKnown RBP eCLIP12.59□□□□□ -0.39
CDH1-214ENST00000621016 SNRKQ9NRH2 765 aa12.59□□□□□ -0.39
CDH1-214ENST00000621016 IRF6O14896 467 aa12.59□□□□□ -0.39
CDH1-214ENST00000621016 HSP90AB3PQ58FF7 597 aa12.59□□□□□ -0.39
CDH1-214ENST00000621016 LUZP1Q86V48 1076 aa12.59□□□□□ -0.39
CDH1-214ENST00000621016 ZNF592Q92610 1267 aa12.59□□□□□ -0.39
CDH1-214ENST00000621016 ZBTB3Q9H5J0 574 aa12.59□□□□□ -0.39
CDH1-214ENST00000621016 TULP2O00295 520 aa12.59□□□□□ -0.39
CDH1-214ENST00000621016 ST3GAL1Q11201 340 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms