RNA–Protein interactions for RNA: ENST00000620828.4

FMR1-217, Transcript of fragile X mental retardation 1, humanhuman

TSL 1 (best)

Gene FMR1, Length 4,830 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FMR1-217ENST00000620828 AKAP11Q9UKA4 1901 aa7.33□□□□□ -1.24
FMR1-217ENST00000620828 PI4KAP2A4QPH2 592 aa7.33□□□□□ -1.24
FMR1-217ENST00000620828 TMC4Q7Z404 712 aa7.33□□□□□ -1.24
FMR1-217ENST00000620828 PI4KAP1Q8N8J0 262 aa7.33□□□□□ -1.24
FMR1-217ENST00000620828 MYH16Q9H6N6 1097 aa7.33□□□□□ -1.24
FMR1-217ENST00000620828 PTPRCP08575 1304 aa7.33□□□□□ -1.24
FMR1-217ENST00000620828 BBOX1O75936 387 aa7.32□□□□□ -1.24
FMR1-217ENST00000620828 RTKN2Q8IZC4 609 aa7.32□□□□□ -1.24
FMR1-217ENST00000620828 PPEF1O14829 653 aaPredicted RBP7.32□□□□□ -1.24
FMR1-217ENST00000620828 GOLGA2Q08379 1002 aa7.32□□□□□ -1.24
FMR1-217ENST00000620828 CCDC93Q567U6 631 aa7.32□□□□□ -1.24
FMR1-217ENST00000620828 NECTIN2Q92692 538 aa7.32□□□□□ -1.24
FMR1-217ENST00000620828 CELF1Q92879 486 aaKnown RBP7.32□□□□□ -1.24
FMR1-217ENST00000620828 RBM17Q96I25 401 aaKnown RBP7.32□□□□□ -1.24
FMR1-217ENST00000620828 CHMP4AQ9BY43 222 aa7.32□□□□□ -1.24
FMR1-217ENST00000620828 SLC4A2P04920 1241 aa7.32□□□□□ -1.24
FMR1-217ENST00000620828 LINS1Q8NG48 757 aa7.32□□□□□ -1.24
FMR1-217ENST00000620828 DDX60LQ5H9U9 1706 aaKnown RBP7.32□□□□□ -1.24
FMR1-217ENST00000620828 YDJCA8MPS7 323 aa7.31□□□□□ -1.24
FMR1-217ENST00000620828 PDE8AO60658 829 aa7.31□□□□□ -1.24
FMR1-217ENST00000620828 DNAJC5GQ8N7S2 189 aa7.31□□□□□ -1.24
FMR1-217ENST00000620828 ANKRD44Q8N8A2 993 aa7.31□□□□□ -1.24
FMR1-217ENST00000620828 SSH1Q8WYL5 1049 aa7.31□□□□□ -1.24
FMR1-217ENST00000620828 FAM89AQ96GI7 184 aa7.31□□□□□ -1.24
FMR1-217ENST00000620828 ZBED9Q6R2W3 1325 aa7.31□□□□□ -1.24
FMR1-217ENST00000620828 HCLS1P14317 486 aaPredicted RBP7.31□□□□□ -1.24
FMR1-217ENST00000620828 RFX5P48382 616 aaPredicted RBP7.31□□□□□ -1.24
FMR1-217ENST00000620828 C1QTNF8P60827 252 aa7.31□□□□□ -1.24
FMR1-217ENST00000620828 EPHA10Q5JZY3 1008 aa7.31□□□□□ -1.24
FMR1-217ENST00000620828 RBM46Q8TBY0 533 aaKnown RBP7.31□□□□□ -1.24
FMR1-217ENST00000620828 MYD88Q99836 296 aa7.31□□□□□ -1.24
FMR1-217ENST00000620828 CWC25Q9NXE8 425 aaPredicted RBP7.31□□□□□ -1.24
FMR1-217ENST00000620828 LAS1LQ9Y4W2 734 aaKnown RBP7.31□□□□□ -1.24
FMR1-217ENST00000620828 ATP5J2-PTCD1G3V325 749 aa7.31□□□□□ -1.24
FMR1-217ENST00000620828 DNAAF4Q8WXU2 420 aa7.31□□□□□ -1.24
FMR1-217ENST00000620828 POLLQ9UGP5 575 aa7.31□□□□□ -1.24
FMR1-217ENST00000620828 ALDH1L1O75891 902 aa7.31□□□□□ -1.24
FMR1-217ENST00000620828 IARSP41252 1262 aaKnown RBP7.31□□□□□ -1.24
FMR1-217ENST00000620828 CTSWP56202 376 aa7.31□□□□□ -1.24
FMR1-217ENST00000620828 KIAA2012Q0VF49 1180 aa7.31□□□□□ -1.24
FMR1-217ENST00000620828 CWF19L2Q2TBE0 894 aaKnown RBP7.31□□□□□ -1.24
FMR1-217ENST00000620828 ARHGAP27Q6ZUM4 889 aa7.31□□□□□ -1.24
FMR1-217ENST00000620828 FAM9BQ8IZU0 186 aa7.31□□□□□ -1.24
FMR1-217ENST00000620828 VGLL2Q8N8G2 317 aa7.31□□□□□ -1.24
FMR1-217ENST00000620828 ARHGAP45Q92619 1136 aa7.31□□□□□ -1.24
FMR1-217ENST00000620828 TAOK3Q9H2K8 898 aa7.31□□□□□ -1.24
FMR1-217ENST00000620828 POLR2AP24928 1970 aaKnown RBP7.3□□□□□ -1.24
FMR1-217ENST00000620828 IRS4O14654 1257 aaPredicted RBP7.3□□□□□ -1.24
FMR1-217ENST00000620828 AIMP1Q12904 312 aaKnown RBP7.3□□□□□ -1.24
FMR1-217ENST00000620828 RARSP54136 660 aaKnown RBP7.3□□□□□ -1.24
FMR1-217ENST00000620828 MED23Q9ULK4 1368 aa7.3□□□□□ -1.24
FMR1-217ENST00000620828 ELL2O00472 640 aaPredicted RBP7.3□□□□□ -1.24
FMR1-217ENST00000620828 SCNN1DP51172 638 aa7.3□□□□□ -1.24
FMR1-217ENST00000620828 GPSM2P81274 684 aa7.3□□□□□ -1.24
FMR1-217ENST00000620828 NLRP3Q96P20 1036 aa7.3□□□□□ -1.24
FMR1-217ENST00000620828 GMLQ99445 158 aa7.3□□□□□ -1.24
FMR1-217ENST00000620828 CEP350Q5VT06 3117 aa7.3□□□□□ -1.24
FMR1-217ENST00000620828 TRMT112Q9UI30 125 aaKnown RBP7.3□□□□□ -1.24
FMR1-217ENST00000620828 SIPA1L1O43166 1804 aa7.29□□□□□ -1.24
FMR1-217ENST00000620828 NMRK2Q9NPI5 230 aa7.29□□□□□ -1.24
FMR1-217ENST00000620828 SEC31BQ9NQW1 1179 aa7.29□□□□□ -1.24
FMR1-217ENST00000620828 BSDC1Q9NW68 430 aaPredicted RBP7.29□□□□□ -1.24
FMR1-217ENST00000620828 RNF181Q9P0P0 153 aa7.29□□□□□ -1.24
FMR1-217ENST00000620828 MYO5AQ9Y4I1 1855 aaKnown RBP7.29□□□□□ -1.24
FMR1-217ENST00000620828 DIEXFQ68CQ4 756 aaKnown RBP7.29□□□□□ -1.24
FMR1-217ENST00000620828 INTS3Q68E01 1043 aaKnown RBP7.29□□□□□ -1.24
FMR1-217ENST00000620828 ZBED3Q96IU2 234 aaPredicted RBP7.29□□□□□ -1.24
FMR1-217ENST00000620828 WTIPA6NIX2 430 aaPredicted RBP7.29□□□□□ -1.24
FMR1-217ENST00000620828 FSTL1Q12841 308 aa7.29□□□□□ -1.24
FMR1-217ENST00000620828 USP44Q9H0E7 712 aa7.29□□□□□ -1.24
FMR1-217ENST00000620828 PHIPQ8WWQ0 1821 aa7.28□□□□□ -1.24
FMR1-217ENST00000620828 GPC2Q8N158 579 aa7.28□□□□□ -1.24
FMR1-217ENST00000620828 KLHL34Q8N239 644 aa7.28□□□□□ -1.24
FMR1-217ENST00000620828 TBC1D16Q8TBP0 767 aa7.28□□□□□ -1.24
FMR1-217ENST00000620828 ZNF622Q969S3 477 aaKnown RBP eCLIP7.28□□□□□ -1.247e-8■■■□□ 15.1
FMR1-217ENST00000620828 GREM2Q9H772 168 aa7.28□□□□□ -1.24
FMR1-217ENST00000620828 ZNF330Q9Y3S2 320 aaPredicted RBP7.28□□□□□ -1.24
FMR1-217ENST00000620828 COL1A1P02452 1464 aaPredicted RBP7.28□□□□□ -1.24
FMR1-217ENST00000620828 DDX58O95786 925 aaKnown RBP7.28□□□□□ -1.24
FMR1-217ENST00000620828 ITGBL1O95965 494 aaPredicted RBP7.28□□□□□ -1.24
FMR1-217ENST00000620828 RIC3Q7Z5B4 369 aa7.28□□□□□ -1.24
FMR1-217ENST00000620828 ZNF277Q9NRM2 450 aaPredicted RBP7.28□□□□□ -1.24
FMR1-217ENST00000620828 KIF16BQ96L93 1317 aa7.27□□□□□ -1.24
FMR1-217ENST00000620828 MTX1Q13505 466 aa7.27□□□□□ -1.24
FMR1-217ENST00000620828 MINPP1Q9UNW1 487 aa7.27□□□□□ -1.24
FMR1-217ENST00000620828 RTN4Q9NQC3 1192 aaKnown RBP7.27□□□□□ -1.25
FMR1-217ENST00000620828 DCAF8L1A6NGE4 600 aa7.27□□□□□ -1.25
FMR1-217ENST00000620828 F6X3S4 739 aa7.27□□□□□ -1.25
FMR1-217ENST00000620828 TOMM70O94826 608 aa7.27□□□□□ -1.25
FMR1-217ENST00000620828 SENP3-EIF4A1A0A087X0R7 540 aa7.27□□□□□ -1.25
FMR1-217ENST00000620828 VIL1P09327 827 aaKnown RBP7.26□□□□□ -1.25
FMR1-217ENST00000620828 NBPF7P0C2Y1 421 aaPredicted RBP7.26□□□□□ -1.25
FMR1-217ENST00000620828 RPS8P62241 208 aaKnown RBP7.26□□□□□ -1.25
FMR1-217ENST00000620828 RPGRQ92834 1020 aaKnown RBP7.26□□□□□ -1.25
FMR1-217ENST00000620828 SUCLG2Q96I99 432 aa7.26□□□□□ -1.25
FMR1-217ENST00000620828 WWC3Q9ULE0 1092 aa7.26□□□□□ -1.25
FMR1-217ENST00000620828 RIPOR2Q9Y4F9 1068 aa7.26□□□□□ -1.25
FMR1-217ENST00000620828 GRM8O00222 908 aa7.26□□□□□ -1.25
FMR1-217ENST00000620828 ZNF280AP59817 542 aaPredicted RBP7.26□□□□□ -1.25
FMR1-217ENST00000620828 FGFR2P21802 821 aa7.26□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms