RNA–Protein interactions for RNA: ENST00000620676.4

VPS13D-214, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene VPS13D, Length 16,320 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-214ENST00000620676 IKQ13123 557 aaPredicted RBP5.76□□□□□ -1.49
VPS13D-214ENST00000620676 OTUD7BQ6GQQ9 843 aa5.76□□□□□ -1.49
VPS13D-214ENST00000620676 CEP128Q6ZU80 1094 aa5.76□□□□□ -1.49
VPS13D-214ENST00000620676 FAM167BQ9BTA0 163 aa5.76□□□□□ -1.49
VPS13D-214ENST00000620676 BMP2KLQ5H9B9 411 aa5.76□□□□□ -1.49
VPS13D-214ENST00000620676 TTC16Q8NEE8 873 aa5.76□□□□□ -1.49
VPS13D-214ENST00000620676 GBP5Q96PP8 586 aa5.76□□□□□ -1.49
VPS13D-214ENST00000620676 CTNNA3Q9UI47 895 aa5.76□□□□□ -1.49
VPS13D-214ENST00000620676 MCM3P25205 808 aa5.76□□□□□ -1.49
VPS13D-214ENST00000620676 RBBP5Q15291 538 aaKnown RBP5.76□□□□□ -1.49
VPS13D-214ENST00000620676 RPUSD2Q8IZ73 545 aaKnown RBP5.76□□□□□ -1.49
VPS13D-214ENST00000620676 CPLX2Q6PUV4 134 aaKnown RBP5.76□□□□□ -1.49
VPS13D-214ENST00000620676 N4BP3O15049 544 aa5.75□□□□□ -1.49
VPS13D-214ENST00000620676 NOP2P46087 812 aaKnown RBP5.75□□□□□ -1.49
VPS13D-214ENST00000620676 SND1Q7KZF4 910 aaKnown RBP eCLIP5.75□□□□□ -1.49
VPS13D-214ENST00000620676 APBB1IPQ7Z5R6 666 aaPredicted RBP5.75□□□□□ -1.49
VPS13D-214ENST00000620676 PPP1R13BQ96KQ4 1090 aa5.75□□□□□ -1.49
VPS13D-214ENST00000620676 DDX41Q9UJV9 622 aaKnown RBP5.75□□□□□ -1.49
VPS13D-214ENST00000620676 CSB-PGBD3P0DP91 1061 aa5.75□□□□□ -1.49
VPS13D-214ENST00000620676 VPS41P49754 854 aa5.75□□□□□ -1.49
VPS13D-214ENST00000620676 PTPROQ16827 1216 aa5.75□□□□□ -1.49
VPS13D-214ENST00000620676 PLEKHM2Q8IWE5 1019 aa5.75□□□□□ -1.49
VPS13D-214ENST00000620676 CLCN6P51797 869 aa5.75□□□□□ -1.49
VPS13D-214ENST00000620676 HDAC1Q13547 482 aaPredicted RBP5.75□□□□□ -1.49
VPS13D-214ENST00000620676 CEP85LQ5SZL2 805 aa5.75□□□□□ -1.49
VPS13D-214ENST00000620676 MKRN1Q9UHC7 482 aaKnown RBP5.75□□□□□ -1.49
VPS13D-214ENST00000620676 HAND2P61296 217 aa5.75□□□□□ -1.49
VPS13D-214ENST00000620676 PLIN2Q99541 437 aa5.75□□□□□ -1.49
VPS13D-214ENST00000620676 YEATS4O95619 227 aa5.75□□□□□ -1.49
VPS13D-214ENST00000620676 PDHA1P08559 390 aa5.75□□□□□ -1.49
VPS13D-214ENST00000620676 PIP4K2BP78356 416 aa5.75□□□□□ -1.49
VPS13D-214ENST00000620676 CACTINQ8WUQ7 758 aaKnown RBP5.75□□□□□ -1.49
VPS13D-214ENST00000620676 YIPF3Q9GZM5 350 aa5.75□□□□□ -1.49
VPS13D-214ENST00000620676 KIF9Q9HAQ2 790 aa5.75□□□□□ -1.49
VPS13D-214ENST00000620676 A0A1B0GVL5 298 aa5.75□□□□□ -1.49
VPS13D-214ENST00000620676 TMED8Q6PL24 325 aaPredicted RBP5.75□□□□□ -1.49
VPS13D-214ENST00000620676 GOLGA6L9A6NEM1 432 aa5.75□□□□□ -1.49
VPS13D-214ENST00000620676 VGFO15240 615 aaPredicted RBP5.75□□□□□ -1.49
VPS13D-214ENST00000620676 OPA1O60313 960 aa5.75□□□□□ -1.49
VPS13D-214ENST00000620676 GNPTABQ3T906 1256 aa5.75□□□□□ -1.49
VPS13D-214ENST00000620676 LCMT1Q9UIC8 334 aa5.75□□□□□ -1.49
VPS13D-214ENST00000620676 ANKRD1Q15327 319 aa5.75□□□□□ -1.49
VPS13D-214ENST00000620676 DBN1Q16643 649 aa5.75□□□□□ -1.49
VPS13D-214ENST00000620676 CCDC47Q96A33 483 aaKnown RBP5.75□□□□□ -1.49
VPS13D-214ENST00000620676 FEZ2Q9UHY8 353 aaPredicted RBP5.75□□□□□ -1.49
VPS13D-214ENST00000620676 FAM133BQ5BKY9 247 aaKnown RBP5.75□□□□□ -1.49
VPS13D-214ENST00000620676 FOXR1Q6PIV2 292 aa5.75□□□□□ -1.49
VPS13D-214ENST00000620676 POLD4Q9HCU8 107 aa5.75□□□□□ -1.49
VPS13D-214ENST00000620676 ERBINQ96RT1 1412 aa5.75□□□□□ -1.49
VPS13D-214ENST00000620676 CCDC196A0A1B0GTZ2 297 aa5.75□□□□□ -1.49
VPS13D-214ENST00000620676 MAGEA9P43362 315 aa5.75□□□□□ -1.49
VPS13D-214ENST00000620676 CCDC85AQ96PX6 553 aaPredicted RBP5.75□□□□□ -1.49
VPS13D-214ENST00000620676 SLFN14P0C7P3 912 aa5.75□□□□□ -1.49
VPS13D-214ENST00000620676 TMPOP42166 694 aaKnown RBP5.75□□□□□ -1.49
VPS13D-214ENST00000620676 NAIF1Q69YI7 327 aaPredicted RBP5.75□□□□□ -1.49
VPS13D-214ENST00000620676 RAB11FIP3O75154 756 aa5.74□□□□□ -1.49
VPS13D-214ENST00000620676 CCDC25Q86WR0 208 aa5.74□□□□□ -1.49
VPS13D-214ENST00000620676 ZNF513Q8N8E2 541 aaPredicted RBP5.74□□□□□ -1.49
VPS13D-214ENST00000620676 SPATS2LQ9NUQ6 558 aaKnown RBP5.74□□□□□ -1.49
VPS13D-214ENST00000620676 ATP11AP98196 1134 aa5.74□□□□□ -1.49
VPS13D-214ENST00000620676 ANKS4BQ8N8V4 417 aa5.74□□□□□ -1.49
VPS13D-214ENST00000620676 TRIM31Q9BZY9 425 aa5.74□□□□□ -1.49
VPS13D-214ENST00000620676 ABCF2Q9UG63 623 aa5.74□□□□□ -1.49
VPS13D-214ENST00000620676 SLC4A7Q9Y6M7 1214 aa5.74□□□□□ -1.49
VPS13D-214ENST00000620676 MORC2Q9Y6X9 1032 aaPredicted RBP5.74□□□□□ -1.49
VPS13D-214ENST00000620676 APOBRQ0VD83 1088 aa5.74□□□□□ -1.49
VPS13D-214ENST00000620676 ORC3Q9UBD5 711 aaPredicted RBP5.74□□□□□ -1.49
VPS13D-214ENST00000620676 PAX7P23759 505 aa5.74□□□□□ -1.49
VPS13D-214ENST00000620676 FBF1Q8TES7 1133 aa5.74□□□□□ -1.49
VPS13D-214ENST00000620676 C8orf76Q96K31 380 aa5.74□□□□□ -1.49
VPS13D-214ENST00000620676 CCDC8Q9H0W5 538 aaPredicted RBP5.74□□□□□ -1.49
VPS13D-214ENST00000620676 ATAD2Q6PL18 1390 aa5.74□□□□□ -1.49
VPS13D-214ENST00000620676 JMYQ8N9B5 988 aa5.74□□□□□ -1.49
VPS13D-214ENST00000620676 SETSIPP0DME0 302 aa5.74□□□□□ -1.49
VPS13D-214ENST00000620676 RRS1Q15050 365 aaKnown RBP5.74□□□□□ -1.49
VPS13D-214ENST00000620676 SYKP43405 635 aa5.74□□□□□ -1.49
VPS13D-214ENST00000620676 SPTY2D1Q68D10 685 aaPredicted RBP5.74□□□□□ -1.49
VPS13D-214ENST00000620676 CCDC129Q6ZRS4 1044 aa5.74□□□□□ -1.49
VPS13D-214ENST00000620676 NCOA1Q15788 1441 aa5.74□□□□□ -1.49
VPS13D-214ENST00000620676 PAFAH1B1P43034 410 aa5.74□□□□□ -1.49
VPS13D-214ENST00000620676 ARMC9Q7Z3E5 817 aa5.74□□□□□ -1.49
VPS13D-214ENST00000620676 LRRC8AQ8IWT6 810 aa5.74□□□□□ -1.49
VPS13D-214ENST00000620676 ACTN2P35609 894 aa5.74□□□□□ -1.49
VPS13D-214ENST00000620676 FANCCQ00597 558 aa5.74□□□□□ -1.49
VPS13D-214ENST00000620676 KRT18P05783 430 aaKnown RBP5.74□□□□□ -1.49
VPS13D-214ENST00000620676 LACTBP83111 547 aaPredicted RBP5.74□□□□□ -1.49
VPS13D-214ENST00000620676 GIGYF2Q6Y7W6 1299 aaKnown RBP5.74□□□□□ -1.49
VPS13D-214ENST00000620676 MMS22LQ6ZRQ5 1243 aa5.74□□□□□ -1.49
VPS13D-214ENST00000620676 CCDC144AA2RUR9 1427 aa5.74□□□□□ -1.49
VPS13D-214ENST00000620676 POTEDQ86YR6 584 aa5.73□□□□□ -1.49
VPS13D-214ENST00000620676 KCNF1Q9H3M0 494 aa5.73□□□□□ -1.49
VPS13D-214ENST00000620676 SH2B1Q9NRF2 756 aaPredicted RBP5.73□□□□□ -1.49
VPS13D-214ENST00000620676 XPO4Q9C0E2 1151 aaKnown RBP5.73□□□□□ -1.49
VPS13D-214ENST00000620676 CLSTN2Q9H4D0 955 aa5.73□□□□□ -1.49
VPS13D-214ENST00000620676 ARL10Q8N8L6 244 aa5.73□□□□□ -1.49
VPS13D-214ENST00000620676 TCP11Q8WWU5 503 aa5.73□□□□□ -1.49
VPS13D-214ENST00000620676 SLF1Q9BQI6 1058 aa5.73□□□□□ -1.49
VPS13D-214ENST00000620676 CAPS2Q9BXY5 557 aa5.73□□□□□ -1.49
VPS13D-214ENST00000620676 GNAI3P08754 354 aa5.73□□□□□ -1.49
VPS13D-214ENST00000620676 TMED1Q13445 227 aa5.73□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms