RNA–Protein interactions for RNA: ENST00000620175.4

SYN2-205, Transcript of synapsin II, humanhuman

TSL 1 (best) BASIC

Gene SYN2, Length 3,871 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYN2-205ENST00000620175 FKBP4Q02790 459 aaKnown RBP eCLIP16.36■□□□□ 0.21
SYN2-205ENST00000620175 SMC1AQ14683 1233 aaKnown RBP16.36■□□□□ 0.21
SYN2-205ENST00000620175 DDX46Q7L014 1031 aaKnown RBP16.36■□□□□ 0.21
SYN2-205ENST00000620175 PROSER2Q86WR7 435 aaPredicted RBP16.36■□□□□ 0.21
SYN2-205ENST00000620175 RTL1A6NKG5 1358 aa16.36■□□□□ 0.21
SYN2-205ENST00000620175 NUDT16Q96DE0 195 aaKnown RBP16.36■□□□□ 0.21
SYN2-205ENST00000620175 CLSTN2Q9H4D0 955 aa16.36■□□□□ 0.21
SYN2-205ENST00000620175 ADGRL2O95490 1459 aa16.36■□□□□ 0.21
SYN2-205ENST00000620175 ZSCAN12O43309 604 aa16.36■□□□□ 0.21
SYN2-205ENST00000620175 CCDC129Q6ZRS4 1044 aa16.36■□□□□ 0.21
SYN2-205ENST00000620175 CLASP1Q7Z460 1538 aa16.35■□□□□ 0.21
SYN2-205ENST00000620175 SLFN14P0C7P3 912 aa16.35■□□□□ 0.21
SYN2-205ENST00000620175 NEK1Q96PY6 1258 aa16.35■□□□□ 0.21
SYN2-205ENST00000620175 RTEL1-TNFRSF6BF6WH68 1400 aa16.35■□□□□ 0.21
SYN2-205ENST00000620175 NBPF7P0C2Y1 421 aaPredicted RBP16.35■□□□□ 0.21
SYN2-205ENST00000620175 IL25Q9H293 177 aa16.35■□□□□ 0.21
SYN2-205ENST00000620175 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP16.35■□□□□ 0.21
SYN2-205ENST00000620175 DUOX2Q9NRD8 1548 aa16.34■□□□□ 0.21
SYN2-205ENST00000620175 APOBRQ0VD83 1088 aa16.34■□□□□ 0.21
SYN2-205ENST00000620175 CPLX2Q6PUV4 134 aaKnown RBP16.34■□□□□ 0.21
SYN2-205ENST00000620175 IPO7O95373 1038 aaKnown RBP16.34■□□□□ 0.21
SYN2-205ENST00000620175 RDXP35241 583 aaKnown RBP16.34■□□□□ 0.21
SYN2-205ENST00000620175 PPP2R3AQ06190 1150 aa16.34■□□□□ 0.21
SYN2-205ENST00000620175 TRDNQ13061 729 aa16.34■□□□□ 0.21
SYN2-205ENST00000620175 RRP12Q5JTH9 1297 aaKnown RBP16.34■□□□□ 0.21
SYN2-205ENST00000620175 C8orf76Q96K31 380 aa16.34■□□□□ 0.21
SYN2-205ENST00000620175 NCOA3Q9Y6Q9 1424 aa16.34■□□□□ 0.21
SYN2-205ENST00000620175 HDAC5Q9UQL6 1122 aa16.34■□□□□ 0.21
SYN2-205ENST00000620175 RAD51AP2Q09MP3 1159 aa16.33■□□□□ 0.21
SYN2-205ENST00000620175 TTC31Q49AM3 519 aaPredicted RBP16.33■□□□□ 0.21
SYN2-205ENST00000620175 DNAAF4Q8WXU2 420 aa16.33■□□□□ 0.21
SYN2-205ENST00000620175 DESI2Q9BSY9 194 aa16.33■□□□□ 0.21
SYN2-205ENST00000620175 MATR3P43243 847 aaKnown RBP eCLIP16.33■□□□□ 0.2
SYN2-205ENST00000620175 VPS53Q5VIR6 699 aa16.33■□□□□ 0.2
SYN2-205ENST00000620175 CTAGE5O15320 804 aa16.33■□□□□ 0.2
SYN2-205ENST00000620175 ANKRD7Q92527 254 aa16.32■□□□□ 0.2
SYN2-205ENST00000620175 SMARCC1Q92922 1105 aaPredicted RBP16.32■□□□□ 0.2
SYN2-205ENST00000620175 HYPKQ9NX55 129 aa16.32■□□□□ 0.2
SYN2-205ENST00000620175 EPB41L2O43491 1005 aaKnown RBP16.32■□□□□ 0.2
SYN2-205ENST00000620175 EIF4A2Q14240 407 aaKnown RBP16.32■□□□□ 0.2
SYN2-205ENST00000620175 SNRKQ9NRH2 765 aa16.32■□□□□ 0.2
SYN2-205ENST00000620175 HOOK1Q9UJC3 728 aaKnown RBP16.32■□□□□ 0.2
SYN2-205ENST00000620175 SAMD9LQ8IVG5 1584 aa16.32■□□□□ 0.2
SYN2-205ENST00000620175 PNMA6AP0CW24 399 aaPredicted RBP16.32■□□□□ 0.2
SYN2-205ENST00000620175 PSME1Q06323 249 aa16.32■□□□□ 0.2
SYN2-205ENST00000620175 CWF19L2Q2TBE0 894 aaKnown RBP16.32■□□□□ 0.2
SYN2-205ENST00000620175 ESCO1Q5FWF5 840 aa16.32■□□□□ 0.2
SYN2-205ENST00000620175 CRACR2AQ9BSW2 395 aa16.32■□□□□ 0.2
SYN2-205ENST00000620175 PIP4K2AP48426 406 aaPredicted RBP16.31■□□□□ 0.2
SYN2-205ENST00000620175 MTHFSDQ2M296 383 aaKnown RBP16.31■□□□□ 0.2
SYN2-205ENST00000620175 HIP1O00291 1037 aa16.31■□□□□ 0.2
SYN2-205ENST00000620175 KIF5CO60282 957 aa16.31■□□□□ 0.2
SYN2-205ENST00000620175 LONRF3Q496Y0 759 aa16.31■□□□□ 0.2
SYN2-205ENST00000620175 C1orf141Q5JVX7 400 aa16.31■□□□□ 0.2
SYN2-205ENST00000620175 SPECC1Q5M775 1068 aa16.31■□□□□ 0.2
SYN2-205ENST00000620175 CCDC150Q8NCX0 1101 aa16.31■□□□□ 0.2
SYN2-205ENST00000620175 MTMR7Q9Y216 660 aa16.31■□□□□ 0.2
SYN2-205ENST00000620175 CCDC61Q9Y6R9 512 aa16.31■□□□□ 0.2
SYN2-205ENST00000620175 CSB-PGBD3P0DP91 1061 aa16.31■□□□□ 0.2
SYN2-205ENST00000620175 MRPS27Q92552 414 aaKnown RBP16.31■□□□□ 0.2
SYN2-205ENST00000620175 EVI5LQ96CN4 794 aa16.31■□□□□ 0.2
SYN2-205ENST00000620175 CBFA2T2O43439 604 aa16.3■□□□□ 0.2
SYN2-205ENST00000620175 ATP2C2O75185 946 aa16.3■□□□□ 0.2
SYN2-205ENST00000620175 RXRAP19793 462 aa16.3■□□□□ 0.2
SYN2-205ENST00000620175 STX17P56962 302 aa16.3■□□□□ 0.2
SYN2-205ENST00000620175 ST5P78524 1137 aa16.3■□□□□ 0.2
SYN2-205ENST00000620175 SART3Q15020 963 aaKnown RBP16.3■□□□□ 0.2
SYN2-205ENST00000620175 ATP7AQ04656 1500 aa16.3■□□□□ 0.2
SYN2-205ENST00000620175 CNNM3Q8NE01 707 aa16.3■□□□□ 0.2
SYN2-205ENST00000620175 ADCY10Q96PN6 1610 aa16.3■□□□□ 0.2
SYN2-205ENST00000620175 CHPF2Q9P2E5 772 aa16.3■□□□□ 0.2
SYN2-205ENST00000620175 SOS1Q07889 1333 aaPredicted RBP16.3■□□□□ 0.2
SYN2-205ENST00000620175 ERVK-7P63135 1459 aa16.29■□□□□ 0.2
SYN2-205ENST00000620175 ADKP55263 362 aaKnown RBP16.29■□□□□ 0.2
SYN2-205ENST00000620175 WWC2Q6AWC2 1192 aa16.29■□□□□ 0.2
SYN2-205ENST00000620175 SYNMO15061 1565 aa16.29■□□□□ 0.2
SYN2-205ENST00000620175 RNF187Q5TA31 235 aaPredicted RBP16.29■□□□□ 0.2
SYN2-205ENST00000620175 CCDC70Q6NSX1 233 aa16.29■□□□□ 0.2
SYN2-205ENST00000620175 AMOTL2Q9Y2J4 779 aa16.29■□□□□ 0.2
SYN2-205ENST00000620175 MPRIPQ6WCQ1 1025 aa16.29■□□□□ 0.2
SYN2-205ENST00000620175 GPIHBP1Q8IV16 184 aa16.29■□□□□ 0.2
SYN2-205ENST00000620175 USP28Q96RU2 1077 aa16.29■□□□□ 0.2
SYN2-205ENST00000620175 ORC3Q9UBD5 711 aaPredicted RBP16.29■□□□□ 0.2
SYN2-205ENST00000620175 MORC2Q9Y6X9 1032 aaPredicted RBP16.29■□□□□ 0.2
SYN2-205ENST00000620175 GNAT3A8MTJ3 354 aa16.28■□□□□ 0.2
SYN2-205ENST00000620175 KIAA0754O94854 1291 aa16.28■□□□□ 0.2
SYN2-205ENST00000620175 SMARCE1Q969G3 411 aa16.28■□□□□ 0.2
SYN2-205ENST00000620175 ARHGAP30Q7Z6I6 1101 aaPredicted RBP16.28■□□□□ 0.2
SYN2-205ENST00000620175 ERC1Q8IUD2 1116 aa16.28■□□□□ 0.2
SYN2-205ENST00000620175 CAPZA3Q96KX2 299 aa16.28■□□□□ 0.2
SYN2-205ENST00000620175 PTPDC1A2A3K4 754 aa16.28■□□□□ 0.2
SYN2-205ENST00000620175 MYO1CO00159 1063 aa16.28■□□□□ 0.2
SYN2-205ENST00000620175 SLC27A2O14975 620 aa16.28■□□□□ 0.2
SYN2-205ENST00000620175 WDHD1O75717 1129 aaPredicted RBP16.28■□□□□ 0.2
SYN2-205ENST00000620175 IL13P35225 146 aa16.28■□□□□ 0.2
SYN2-205ENST00000620175 ZNF569Q5MCW4 686 aa16.28■□□□□ 0.2
SYN2-205ENST00000620175 GOLIM4O00461 696 aa16.27■□□□□ 0.2
SYN2-205ENST00000620175 DDX58O95786 925 aaKnown RBP16.27■□□□□ 0.2
SYN2-205ENST00000620175 ETF1P62495 437 aaKnown RBP16.27■□□□□ 0.2
SYN2-205ENST00000620175 ZNF526Q8TF50 670 aaPredicted RBP16.27■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 101.2 ms