RNA–Protein interactions for RNA: ENST00000619917.4

POLR2E-214, Transcript of RNA polymerase II subunit E, humanhuman

TSL 5 BASIC

Gene POLR2E, Length 932 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2E-214ENST00000619917 COL4A1P02462 1669 aa27.65■■■□□ 2.02
POLR2E-214ENST00000619917 KDM2BQ8NHM5 1336 aa27.65■■■□□ 2.02
POLR2E-214ENST00000619917 GLTPD2A6NH11 291 aa27.64■■■□□ 2.02
POLR2E-214ENST00000619917 CELF1Q92879 486 aaKnown RBP27.64■■■□□ 2.02
POLR2E-214ENST00000619917 PDE8AO60658 829 aa27.63■■■□□ 2.01
POLR2E-214ENST00000619917 IARSP41252 1262 aaKnown RBP27.63■■■□□ 2.01
POLR2E-214ENST00000619917 SP8Q8IXZ3 490 aa27.63■■■□□ 2.01
POLR2E-214ENST00000619917 RRAGCQ9HB90 399 aa27.63■■■□□ 2.01
POLR2E-214ENST00000619917 CDHR2Q9BYE9 1310 aa27.63■■■□□ 2.01
POLR2E-214ENST00000619917 H7C1W4 665 aa27.61■■■□□ 2.01
POLR2E-214ENST00000619917 GCKRQ14397 625 aa27.61■■■□□ 2.01
POLR2E-214ENST00000619917 GRIPAP1Q4V328 841 aa27.61■■■□□ 2.01
POLR2E-214ENST00000619917 MRPL50Q8N5N7 158 aaKnown RBP27.61■■■□□ 2.01
POLR2E-214ENST00000619917 LINS1Q8NG48 757 aa27.61■■■□□ 2.01
POLR2E-214ENST00000619917 SEC31BQ9NQW1 1179 aa27.61■■■□□ 2.01
POLR2E-214ENST00000619917 HSP90B1P14625 803 aaKnown RBP27.6■■■□□ 2.01
POLR2E-214ENST00000619917 CCDC85AQ96PX6 553 aaPredicted RBP27.6■■■□□ 2.01
POLR2E-214ENST00000619917 BEND3Q5T5X7 828 aa27.59■■■□□ 2.01
POLR2E-214ENST00000619917 UBE3BQ7Z3V4 1068 aa27.59■■■□□ 2.01
POLR2E-214ENST00000619917 SSH1Q8WYL5 1049 aa27.59■■■□□ 2.01
POLR2E-214ENST00000619917 COL4A5P29400 1685 aa27.59■■■□□ 2.01
POLR2E-214ENST00000619917 CASP7P55210 303 aa27.58■■■□□ 2.01
POLR2E-214ENST00000619917 TMX4Q9H1E5 349 aaPredicted RBP27.58■■■□□ 2.01
POLR2E-214ENST00000619917 CCDC152Q4G0S7 254 aa27.57■■■□□ 2
POLR2E-214ENST00000619917 DPY19L2Q6NUT2 758 aa27.57■■■□□ 2
POLR2E-214ENST00000619917 POTECB2RU33 542 aa27.56■■■□□ 2
POLR2E-214ENST00000619917 DDNO94850 711 aaPredicted RBP27.56■■■□□ 2
POLR2E-214ENST00000619917 CTSWP56202 376 aa27.56■■■□□ 2
POLR2E-214ENST00000619917 RPS8P62241 208 aaKnown RBP27.56■■■□□ 2
POLR2E-214ENST00000619917 TMC4Q7Z404 712 aa27.56■■■□□ 2
POLR2E-214ENST00000619917 MPNDQ8N594 471 aa27.56■■■□□ 2
POLR2E-214ENST00000619917 BCL2L13Q9BXK5 485 aa27.56■■■□□ 2
POLR2E-214ENST00000619917 RTFDC1Q9BY42 306 aaPredicted RBP27.56■■■□□ 2
POLR2E-214ENST00000619917 ZNF541Q9H0D2 1346 aa27.56■■■□□ 2
POLR2E-214ENST00000619917 DPP8Q6V1X1 898 aaPredicted RBP27.55■■■□□ 2
POLR2E-214ENST00000619917 TTLL11Q8NHH1 800 aa27.55■■■□□ 2
POLR2E-214ENST00000619917 FZD9O00144 591 aa27.54■■■□□ 2
POLR2E-214ENST00000619917 AOC3Q16853 763 aa27.53■■■□□ 2
POLR2E-214ENST00000619917 LARGE2Q8N3Y3 721 aa27.53■■■□□ 2
POLR2E-214ENST00000619917 LRRC37AA6NMS7 1700 aa27.53■■■□□ 2
POLR2E-214ENST00000619917 TOMM70O94826 608 aa27.52■■■□□ 2
POLR2E-214ENST00000619917 SLC4A10Q6U841 1118 aa27.52■■■□□ 2
POLR2E-214ENST00000619917 PLA2G12BQ9BX93 195 aa27.52■■■□□ 2
POLR2E-214ENST00000619917 GREM2Q9H772 168 aa27.52■■■□□ 2
POLR2E-214ENST00000619917 WDR90Q96KV7 1748 aa27.51■■□□□ 1.99
POLR2E-214ENST00000619917 PPIP5K2O43314 1243 aa27.51■■□□□ 1.99
POLR2E-214ENST00000619917 VEGFAP15692 232 aaPredicted RBP27.51■■□□□ 1.99
POLR2E-214ENST00000619917 GPSM2P81274 684 aa27.51■■□□□ 1.99
POLR2E-214ENST00000619917 HNRNPUQ00839 825 aaKnown RBP eCLIP27.51■■□□□ 1.99
POLR2E-214ENST00000619917 ALDH1L2Q3SY69 923 aa27.51■■□□□ 1.99
POLR2E-214ENST00000619917 JDP2Q8WYK2 163 aa27.51■■□□□ 1.99
POLR2E-214ENST00000619917 DUOX1Q9NRD9 1551 aa27.51■■□□□ 1.99
POLR2E-214ENST00000619917 SUPT20HQ8NEM7 779 aa27.5■■□□□ 1.99
POLR2E-214ENST00000619917 NSFL1CQ9UNZ2 370 aaKnown RBP27.5■■□□□ 1.99
POLR2E-214ENST00000619917 C16orf71Q8IYS4 520 aaPredicted RBP27.48■■□□□ 1.99
POLR2E-214ENST00000619917 VPS33BQ9H267 617 aa27.48■■□□□ 1.99
POLR2E-214ENST00000619917 SMC4Q9NTJ3 1288 aa27.48■■□□□ 1.99
POLR2E-214ENST00000619917 PTPRCP08575 1304 aa27.47■■□□□ 1.99
POLR2E-214ENST00000619917 ALDH1L1O75891 902 aa27.47■■□□□ 1.99
POLR2E-214ENST00000619917 CSF1RP07333 972 aa27.47■■□□□ 1.99
POLR2E-214ENST00000619917 CT47B1P0C2W7 299 aaPredicted RBP27.47■■□□□ 1.99
POLR2E-214ENST00000619917 ANKRD18AQ8IVF6 992 aa27.47■■□□□ 1.99
POLR2E-214ENST00000619917 NIM1KQ8IY84 436 aa27.47■■□□□ 1.99
POLR2E-214ENST00000619917 SRCIN1Q9C0H9 1055 aa27.47■■□□□ 1.99
POLR2E-214ENST00000619917 POLLQ9UGP5 575 aa27.47■■□□□ 1.99
POLR2E-214ENST00000619917 RTL9Q8NET4 1388 aa27.47■■□□□ 1.99
POLR2E-214ENST00000619917 MYH3P11055 1940 aa27.46■■□□□ 1.99
POLR2E-214ENST00000619917 GRM8O00222 908 aa27.46■■□□□ 1.99
POLR2E-214ENST00000619917 KIAA2012Q0VF49 1180 aa27.46■■□□□ 1.99
POLR2E-214ENST00000619917 RBM46Q8TBY0 533 aaKnown RBP27.46■■□□□ 1.99
POLR2E-214ENST00000619917 EIF6P56537 245 aaKnown RBP27.45■■□□□ 1.98
POLR2E-214ENST00000619917 FOXO4P98177 505 aa27.45■■□□□ 1.98
POLR2E-214ENST00000619917 FAM161AQ3B820 660 aa27.45■■□□□ 1.98
POLR2E-214ENST00000619917 L3MBTL3Q96JM7 780 aaPredicted RBP27.45■■□□□ 1.98
POLR2E-214ENST00000619917 GPR101Q96P66 508 aaPredicted RBP27.45■■□□□ 1.98
POLR2E-214ENST00000619917 CDC5LQ99459 802 aaKnown RBP27.45■■□□□ 1.98
POLR2E-214ENST00000619917 EPHA10Q5JZY3 1008 aa27.44■■□□□ 1.98
POLR2E-214ENST00000619917 TBC1D16Q8TBP0 767 aa27.44■■□□□ 1.98
POLR2E-214ENST00000619917 LTBP1Q14766 1721 aa27.44■■□□□ 1.98
POLR2E-214ENST00000619917 C6orf229H3BNL8 230 aa27.43■■□□□ 1.98
POLR2E-214ENST00000619917 PODXL2Q9NZ53 605 aa27.43■■□□□ 1.98
POLR2E-214ENST00000619917 C9orf78Q9NZ63 289 aaPredicted RBP27.43■■□□□ 1.98
POLR2E-214ENST00000619917 ITGA6P23229 1130 aa27.42■■□□□ 1.98
POLR2E-214ENST00000619917 RARSP54136 660 aaKnown RBP27.42■■□□□ 1.98
POLR2E-214ENST00000619917 GPC2Q8N158 579 aa27.42■■□□□ 1.98
POLR2E-214ENST00000619917 ZNRF3Q9ULT6 936 aa27.42■■□□□ 1.98
POLR2E-214ENST00000619917 GJA3Q9Y6H8 435 aa27.42■■□□□ 1.98
POLR2E-214ENST00000619917 RIMBP2O15034 1052 aa27.41■■□□□ 1.98
POLR2E-214ENST00000619917 WASHC4Q2M389 1173 aa27.41■■□□□ 1.98
POLR2E-214ENST00000619917 BSDC1Q9NW68 430 aaPredicted RBP27.41■■□□□ 1.98
POLR2E-214ENST00000619917 NOB1Q9ULX3 412 aaKnown RBP27.41■■□□□ 1.98
POLR2E-214ENST00000619917 NBPF7P0C2Y1 421 aaPredicted RBP27.4■■□□□ 1.98
POLR2E-214ENST00000619917 CXCL9Q07325 125 aa27.4■■□□□ 1.98
POLR2E-214ENST00000619917 ANKIB1Q9P2G1 1089 aa27.4■■□□□ 1.98
POLR2E-214ENST00000619917 WTIPA6NIX2 430 aaPredicted RBP27.39■■□□□ 1.98
POLR2E-214ENST00000619917 YDJCA8MPS7 323 aa27.39■■□□□ 1.98
POLR2E-214ENST00000619917 POTEIP0CG38 1075 aa27.39■■□□□ 1.98
POLR2E-214ENST00000619917 POTEJP0CG39 1038 aa27.39■■□□□ 1.98
POLR2E-214ENST00000619917 BRPF1P55201 1214 aaPredicted RBP27.39■■□□□ 1.98
POLR2E-214ENST00000619917 KAZALD1Q96I82 304 aa27.39■■□□□ 1.98
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms