RNA–Protein interactions for RNA: ENST00000619119.4

SEMA3B-214, Transcript of semaphorin 3B, humanhuman

TSL 5

Gene SEMA3B, Length 3,158 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-214ENST00000619119 COL18A1P39060 1754 aa18.72■□□□□ 0.59
SEMA3B-214ENST00000619119 DRC7Q8IY82 874 aa18.72■□□□□ 0.59
SEMA3B-214ENST00000619119 KDM3BQ7LBC6 1761 aa18.72■□□□□ 0.59
SEMA3B-214ENST00000619119 CPDO75976 1380 aa18.72■□□□□ 0.59
SEMA3B-214ENST00000619119 CLGNO14967 610 aa18.72■□□□□ 0.59
SEMA3B-214ENST00000619119 CCDC186Q7Z3E2 898 aa18.72■□□□□ 0.59
SEMA3B-214ENST00000619119 LARP1Q6PKG0 1096 aaKnown RBP18.71■□□□□ 0.59
SEMA3B-214ENST00000619119 TTC5Q8N0Z6 440 aa18.71■□□□□ 0.59
SEMA3B-214ENST00000619119 TMX3Q96JJ7 454 aa18.71■□□□□ 0.59
SEMA3B-214ENST00000619119 ZKSCAN7Q9P0L1 754 aaPredicted RBP18.71■□□□□ 0.59
SEMA3B-214ENST00000619119 CAMTA1Q9Y6Y1 1673 aa18.71■□□□□ 0.59
SEMA3B-214ENST00000619119 CABP4P57796 275 aa18.71■□□□□ 0.59
SEMA3B-214ENST00000619119 CWF19L2Q2TBE0 894 aaKnown RBP18.71■□□□□ 0.59
SEMA3B-214ENST00000619119 BEND3Q5T5X7 828 aa18.71■□□□□ 0.59
SEMA3B-214ENST00000619119 WDR17Q8IZU2 1322 aa18.71■□□□□ 0.59
SEMA3B-214ENST00000619119 POLR3GO15318 223 aaPredicted RBP18.71■□□□□ 0.58
SEMA3B-214ENST00000619119 PAXBP1Q9Y5B6 917 aa18.71■□□□□ 0.58
SEMA3B-214ENST00000619119 CNPY4Q8N129 248 aa18.7■□□□□ 0.58
SEMA3B-214ENST00000619119 GPATCH11Q8N954 259 aa18.7■□□□□ 0.58
SEMA3B-214ENST00000619119 DCAF5Q96JK2 942 aa18.7■□□□□ 0.58
SEMA3B-214ENST00000619119 ADCY9O60503 1353 aa18.7■□□□□ 0.58
SEMA3B-214ENST00000619119 ATP8B2P98198 1209 aa18.7■□□□□ 0.58
SEMA3B-214ENST00000619119 KRBA2Q6ZNG9 492 aa18.7■□□□□ 0.58
SEMA3B-214ENST00000619119 CREBRFQ8IUR6 639 aa18.7■□□□□ 0.58
SEMA3B-214ENST00000619119 ZNF446Q9NWS9 450 aa18.7■□□□□ 0.58
SEMA3B-214ENST00000619119 FAM53CQ9NYF3 392 aa18.7■□□□□ 0.58
SEMA3B-214ENST00000619119 NEK4P51957 841 aa18.69■□□□□ 0.58
SEMA3B-214ENST00000619119 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.69■□□□□ 0.58
SEMA3B-214ENST00000619119 LCMT1Q9UIC8 334 aa18.69■□□□□ 0.58
SEMA3B-214ENST00000619119 USP16Q9Y5T5 823 aa18.69■□□□□ 0.58
SEMA3B-214ENST00000619119 REC8O95072 547 aa18.69■□□□□ 0.58
SEMA3B-214ENST00000619119 MX1P20591 662 aa18.69■□□□□ 0.58
SEMA3B-214ENST00000619119 TTC22Q5TAA0 569 aa18.69■□□□□ 0.58
SEMA3B-214ENST00000619119 ICE2Q659A1 982 aa18.69■□□□□ 0.58
SEMA3B-214ENST00000619119 CEP135Q66GS9 1140 aa18.69■□□□□ 0.58
SEMA3B-214ENST00000619119 PPP1R42Q7Z4L9 355 aa18.69■□□□□ 0.58
SEMA3B-214ENST00000619119 KIF1BPQ96EK5 621 aa18.69■□□□□ 0.58
SEMA3B-214ENST00000619119 IL1RAPL2Q9NP60 686 aa18.68■□□□□ 0.58
SEMA3B-214ENST00000619119 MYO1CO00159 1063 aa18.68■□□□□ 0.58
SEMA3B-214ENST00000619119 ZCRB1Q8TBF4 217 aaKnown RBP18.68■□□□□ 0.58
SEMA3B-214ENST00000619119 NRBP1Q9UHY1 535 aa18.68■□□□□ 0.58
SEMA3B-214ENST00000619119 SRGAP3O43295 1099 aa18.67■□□□□ 0.58
SEMA3B-214ENST00000619119 MYCBPQ99417 103 aaPredicted RBP18.67■□□□□ 0.58
SEMA3B-214ENST00000619119 C9orf78Q9NZ63 289 aaPredicted RBP18.67■□□□□ 0.58
SEMA3B-214ENST00000619119 FAM193AP78312 1265 aa18.67■□□□□ 0.58
SEMA3B-214ENST00000619119 OVOS2A0A0G2JMS6 1433 aa18.67■□□□□ 0.58
SEMA3B-214ENST00000619119 CACNA1FO60840 1977 aa18.67■□□□□ 0.58
SEMA3B-214ENST00000619119 CASQ1P31415 396 aa18.67■□□□□ 0.58
SEMA3B-214ENST00000619119 LRRCC1Q9C099 1032 aa18.67■□□□□ 0.58
SEMA3B-214ENST00000619119 CNPY2Q9Y2B0 182 aa18.67■□□□□ 0.58
SEMA3B-214ENST00000619119 HEG1Q9ULI3 1381 aa18.66■□□□□ 0.58
SEMA3B-214ENST00000619119 SURF6O75683 361 aaKnown RBP18.66■□□□□ 0.58
SEMA3B-214ENST00000619119 PDIA6Q15084 440 aa18.66■□□□□ 0.58
SEMA3B-214ENST00000619119 KSR2Q6VAB6 950 aa18.66■□□□□ 0.58
SEMA3B-214ENST00000619119 CCDC191Q8NCU4 936 aa18.66■□□□□ 0.58
SEMA3B-214ENST00000619119 DDX21Q9NR30 783 aaKnown RBP eCLIP18.66■□□□□ 0.58
SEMA3B-214ENST00000619119 HYPKQ9NX55 129 aa18.66■□□□□ 0.58
SEMA3B-214ENST00000619119 RIC3Q7Z5B4 369 aa18.65■□□□□ 0.58
SEMA3B-214ENST00000619119 SDSP20132 328 aa18.65■□□□□ 0.58
SEMA3B-214ENST00000619119 BMS1Q14692 1282 aaKnown RBP18.65■□□□□ 0.58
SEMA3B-214ENST00000619119 CRYBG1Q9Y4K1 1723 aa18.65■□□□□ 0.58
SEMA3B-214ENST00000619119 COL5A2P05997 1499 aaPredicted RBP18.65■□□□□ 0.58
SEMA3B-214ENST00000619119 IL2RBP14784 551 aa18.65■□□□□ 0.58
SEMA3B-214ENST00000619119 XAGE3Q8WTP9 111 aa18.65■□□□□ 0.58
SEMA3B-214ENST00000619119 BTG4Q9NY30 223 aa18.65■□□□□ 0.58
SEMA3B-214ENST00000619119 COPS6Q7L5N1 327 aa18.64■□□□□ 0.57
SEMA3B-214ENST00000619119 PTCD1O75127 700 aaKnown RBP18.64■□□□□ 0.57
SEMA3B-214ENST00000619119 DRC1Q96MC2 740 aa18.64■□□□□ 0.57
SEMA3B-214ENST00000619119 NCAPGQ9BPX3 1015 aa18.64■□□□□ 0.57
SEMA3B-214ENST00000619119 FIBPO43427 364 aa18.63■□□□□ 0.57
SEMA3B-214ENST00000619119 ZSCAN21Q9Y5A6 473 aaPredicted RBP18.63■□□□□ 0.57
SEMA3B-214ENST00000619119 PXDNLA1KZ92 1463 aa18.63■□□□□ 0.57
SEMA3B-214ENST00000619119 PDE1AP54750 535 aa18.63■□□□□ 0.57
SEMA3B-214ENST00000619119 TEX35Q5T0J7 233 aa18.63■□□□□ 0.57
SEMA3B-214ENST00000619119 FMNL2Q96PY5 1086 aa18.63■□□□□ 0.57
SEMA3B-214ENST00000619119 SNRPA1P09661 255 aaKnown RBP18.63■□□□□ 0.57
SEMA3B-214ENST00000619119 BANK1Q8NDB2 785 aa18.63■□□□□ 0.57
SEMA3B-214ENST00000619119 PCDH11XQ9BZA7 1347 aa18.62■□□□□ 0.57
SEMA3B-214ENST00000619119 PCDH11YQ9BZA8 1340 aa18.62■□□□□ 0.57
SEMA3B-214ENST00000619119 DDX58O95786 925 aaKnown RBP18.62■□□□□ 0.57
SEMA3B-214ENST00000619119 NUTM1Q86Y26 1132 aa18.62■□□□□ 0.57
SEMA3B-214ENST00000619119 TXLNBQ8N3L3 684 aa18.62■□□□□ 0.57
SEMA3B-214ENST00000619119 ST5P78524 1137 aa18.62■□□□□ 0.57
SEMA3B-214ENST00000619119 ZSCAN25Q6NSZ9 544 aa18.62■□□□□ 0.57
SEMA3B-214ENST00000619119 CT47A1Q5JQC4 288 aaPredicted RBP18.61■□□□□ 0.57
SEMA3B-214ENST00000619119 ERO1AQ96HE7 468 aa18.61■□□□□ 0.57
SEMA3B-214ENST00000619119 CARD10Q9BWT7 1032 aa18.61■□□□□ 0.57
SEMA3B-214ENST00000619119 CASC1Q6TDU7 716 aa18.61■□□□□ 0.57
SEMA3B-214ENST00000619119 SSH3Q8TE77 659 aa18.61■□□□□ 0.57
SEMA3B-214ENST00000619119 OS9Q13438 667 aaPredicted RBP18.61■□□□□ 0.57
SEMA3B-214ENST00000619119 AXDND1Q5T1B0 1012 aaPredicted RBP18.61■□□□□ 0.57
SEMA3B-214ENST00000619119 CTR9Q6PD62 1173 aa18.61■□□□□ 0.57
SEMA3B-214ENST00000619119 FUCA2Q9BTY2 467 aa18.61■□□□□ 0.57
SEMA3B-214ENST00000619119 SCN11AQ9UI33 1791 aa18.6■□□□□ 0.57
SEMA3B-214ENST00000619119 USP27XA6NNY8 438 aa18.6■□□□□ 0.57
SEMA3B-214ENST00000619119 MYD88Q99836 296 aa18.6■□□□□ 0.57
SEMA3B-214ENST00000619119 SIPA1L3O60292 1781 aaPredicted RBP18.6■□□□□ 0.57
SEMA3B-214ENST00000619119 SART3Q15020 963 aaKnown RBP18.6■□□□□ 0.57
SEMA3B-214ENST00000619119 ZSCAN26Q16670 478 aa18.6■□□□□ 0.57
SEMA3B-214ENST00000619119 MUM1L1Q5H9M0 696 aa18.6■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms