RNA–Protein interactions for RNA: ENST00000617585.1

ARHGEF1-223, Transcript of Rho guanine nucleotide exchange factor 1, human

TSL 2

Gene ARHGEF1, Length 737 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ARHGEF1-223	ENST00000617585	PCCA	P05165	728 aa	Predicted RBP	28.76	■■■□□ 2.19
ARHGEF1-223	ENST00000617585	GPC2	Q8N158	579 aa		28.76	■■■□□ 2.19
ARHGEF1-223	ENST00000617585	SUPT20H	Q8NEM7	779 aa		28.76	■■■□□ 2.19
ARHGEF1-223	ENST00000617585	HSP90B1	P14625	803 aa	Known RBP	28.75	■■■□□ 2.19
ARHGEF1-223	ENST00000617585	FAM9B	Q8IZU0	186 aa		28.75	■■■□□ 2.19
ARHGEF1-223	ENST00000617585	ZNF428	Q96B54	188 aa		28.75	■■■□□ 2.19
ARHGEF1-223	ENST00000617585	LARGE2	Q8N3Y3	721 aa		28.74	■■■□□ 2.19
ARHGEF1-223	ENST00000617585	TAF1D	Q9H5J8	278 aa	Predicted RBP	28.74	■■■□□ 2.19
ARHGEF1-223	ENST00000617585	CWC25	Q9NXE8	425 aa	Predicted RBP	28.74	■■■□□ 2.19
ARHGEF1-223	ENST00000617585	MAP3K2	Q9Y2U5	619 aa		28.74	■■■□□ 2.19
ARHGEF1-223	ENST00000617585	ADAMTSL1	Q8N6G6	1762 aa		28.73	■■■□□ 2.19
ARHGEF1-223	ENST00000617585	PI4KAP2	A4QPH2	592 aa		28.73	■■■□□ 2.19
ARHGEF1-223	ENST00000617585	VAMP4	O75379	141 aa		28.73	■■■□□ 2.19
ARHGEF1-223	ENST00000617585	MPND	Q8N594	471 aa		28.73	■■■□□ 2.19
ARHGEF1-223	ENST00000617585	PI4KAP1	Q8N8J0	262 aa		28.73	■■■□□ 2.19
ARHGEF1-223	ENST00000617585	DUOX1	Q9NRD9	1551 aa		28.72	■■■□□ 2.19
ARHGEF1-223	ENST00000617585	SLC4A2	P04920	1241 aa		28.72	■■■□□ 2.19
ARHGEF1-223	ENST00000617585	DPP8	Q6V1X1	898 aa	Predicted RBP	28.72	■■■□□ 2.19
ARHGEF1-223	ENST00000617585	SALL2	Q9Y467	1007 aa	Predicted RBP	28.72	■■■□□ 2.19
ARHGEF1-223	ENST00000617585	COL4A1	P02462	1669 aa		28.72	■■■□□ 2.19
ARHGEF1-223	ENST00000617585	EIF6	P56537	245 aa	Known RBP	28.71	■■■□□ 2.19
ARHGEF1-223	ENST00000617585	RTL5	Q5HYW3	569 aa	Predicted RBP	28.71	■■■□□ 2.19
ARHGEF1-223	ENST00000617585	G2E3	Q7L622	706 aa		28.71	■■■□□ 2.19
ARHGEF1-223	ENST00000617585	CELF1	Q92879	486 aa	Known RBP	28.71	■■■□□ 2.19
ARHGEF1-223	ENST00000617585	LTBP1	Q14766	1721 aa		28.71	■■■□□ 2.19
ARHGEF1-223	ENST00000617585	CDHR2	Q9BYE9	1310 aa		28.7	■■■□□ 2.19
ARHGEF1-223	ENST00000617585	PPIP5K2	O43314	1243 aa		28.7	■■■□□ 2.18
ARHGEF1-223	ENST00000617585	IGKV5-2	P06315	115 aa		28.7	■■■□□ 2.18
ARHGEF1-223	ENST00000617585	CHADL	Q6NUI6	762 aa		28.7	■■■□□ 2.18
ARHGEF1-223	ENST00000617585	SPINK5	Q9NQ38	1064 aa	Predicted RBP	28.7	■■■□□ 2.18
ARHGEF1-223	ENST00000617585	HACL1	Q9UJ83	578 aa		28.7	■■■□□ 2.18
ARHGEF1-223	ENST00000617585	MYH3	P11055	1940 aa		28.7	■■■□□ 2.18
ARHGEF1-223	ENST00000617585	PDE8A	O60658	829 aa		28.69	■■■□□ 2.18
ARHGEF1-223	ENST00000617585	KIAA2012	Q0VF49	1180 aa		28.69	■■■□□ 2.18
ARHGEF1-223	ENST00000617585	NIM1K	Q8IY84	436 aa		28.69	■■■□□ 2.18
ARHGEF1-223	ENST00000617585	ZNF521	Q96K83	1311 aa		28.69	■■■□□ 2.18
ARHGEF1-223	ENST00000617585	POTEI	P0CG38	1075 aa		28.68	■■■□□ 2.18
ARHGEF1-223	ENST00000617585	POTEJ	P0CG39	1038 aa		28.68	■■■□□ 2.18
ARHGEF1-223	ENST00000617585	EXOSC9	Q06265	439 aa	Known RBP	28.68	■■■□□ 2.18
ARHGEF1-223	ENST00000617585	AOC3	Q16853	763 aa		28.68	■■■□□ 2.18
ARHGEF1-223	ENST00000617585	LDHD	Q86WU2	507 aa		28.68	■■■□□ 2.18
ARHGEF1-223	ENST00000617585	RPS8	P62241	208 aa	Known RBP	28.66	■■■□□ 2.18
ARHGEF1-223	ENST00000617585	NEXN	Q0ZGT2	675 aa		28.66	■■■□□ 2.18
ARHGEF1-223	ENST00000617585	FLII	Q13045	1269 aa		28.66	■■■□□ 2.18
ARHGEF1-223	ENST00000617585	MYH16	Q9H6N6	1097 aa		28.66	■■■□□ 2.18
ARHGEF1-223	ENST00000617585	ZNRF3	Q9ULT6	936 aa		28.66	■■■□□ 2.18
ARHGEF1-223	ENST00000617585	EPHX2	P34913	555 aa		28.65	■■■□□ 2.18
ARHGEF1-223	ENST00000617585	PNMA8A	Q86V59	439 aa	Predicted RBP	28.65	■■■□□ 2.18
ARHGEF1-223	ENST00000617585	NEURL1B	A8MQ27	555 aa		28.64	■■■□□ 2.18
ARHGEF1-223	ENST00000617585	CCDC152	Q4G0S7	254 aa		28.64	■■■□□ 2.18
ARHGEF1-223	ENST00000617585	SCNN1D	P51172	638 aa		28.63	■■■□□ 2.17
ARHGEF1-223	ENST00000617585	HTRA3	P83110	453 aa		28.63	■■■□□ 2.17
ARHGEF1-223	ENST00000617585	KLRG1	Q96E93	195 aa		28.62	■■■□□ 2.17
ARHGEF1-223	ENST00000617585	SEC31B	Q9NQW1	1179 aa		28.62	■■■□□ 2.17
ARHGEF1-223	ENST00000617585	GJA3	Q9Y6H8	435 aa		28.62	■■■□□ 2.17
ARHGEF1-223	ENST00000617585		H7C1W4	665 aa		28.61	■■■□□ 2.17
ARHGEF1-223	ENST00000617585	CXCL9	Q07325	125 aa		28.61	■■■□□ 2.17
ARHGEF1-223	ENST00000617585	CWF19L2	Q2TBE0	894 aa	Known RBP	28.61	■■■□□ 2.17
ARHGEF1-223	ENST00000617585	PODXL2	Q9NZ53	605 aa		28.61	■■■□□ 2.17
ARHGEF1-223	ENST00000617585	DNAAF4	Q8WXU2	420 aa		28.6	■■■□□ 2.17
ARHGEF1-223	ENST00000617585	JARID2	Q92833	1246 aa	Predicted RBP	28.6	■■■□□ 2.17
ARHGEF1-223	ENST00000617585	NSFL1C	Q9UNZ2	370 aa	Known RBP	28.6	■■■□□ 2.17
ARHGEF1-223	ENST00000617585	PASK	Q96RG2	1323 aa		28.6	■■■□□ 2.17
ARHGEF1-223	ENST00000617585	GPSM2	P81274	684 aa		28.59	■■■□□ 2.17
ARHGEF1-223	ENST00000617585	FKBP5	Q13451	457 aa	Predicted RBP	28.59	■■■□□ 2.17
ARHGEF1-223	ENST00000617585	JMY	Q8N9B5	988 aa		28.59	■■■□□ 2.17
ARHGEF1-223	ENST00000617585	POLL	Q9UGP5	575 aa		28.59	■■■□□ 2.17
ARHGEF1-223	ENST00000617585	RTL9	Q8NET4	1388 aa		28.59	■■■□□ 2.17
ARHGEF1-223	ENST00000617585	ITGBL1	O95965	494 aa	Predicted RBP	28.58	■■■□□ 2.17
ARHGEF1-223	ENST00000617585	CTSW	P56202	376 aa		28.58	■■■□□ 2.17
ARHGEF1-223	ENST00000617585	GCKR	Q14397	625 aa		28.58	■■■□□ 2.17
ARHGEF1-223	ENST00000617585	LINS1	Q8NG48	757 aa		28.58	■■■□□ 2.17
ARHGEF1-223	ENST00000617585	TTLL11	Q8NHH1	800 aa		28.58	■■■□□ 2.17
ARHGEF1-223	ENST00000617585	LMOD1	P29536	600 aa	Predicted RBP	28.57	■■■□□ 2.16
ARHGEF1-223	ENST00000617585	WASHC4	Q2M389	1173 aa		28.57	■■■□□ 2.16
ARHGEF1-223	ENST00000617585	EAPP	Q56P03	285 aa	Predicted RBP	28.57	■■■□□ 2.16
ARHGEF1-223	ENST00000617585	PLA2G12B	Q9BX93	195 aa		28.57	■■■□□ 2.16
ARHGEF1-223	ENST00000617585	YDJC	A8MPS7	323 aa		28.56	■■■□□ 2.16
ARHGEF1-223	ENST00000617585	EPS15	P42566	896 aa		28.56	■■■□□ 2.16
ARHGEF1-223	ENST00000617585	CASP7	P55210	303 aa		28.56	■■■□□ 2.16
ARHGEF1-223	ENST00000617585	TBC1D16	Q8TBP0	767 aa		28.56	■■■□□ 2.16
ARHGEF1-223	ENST00000617585	CIAPIN1	Q6FI81	312 aa		28.55	■■■□□ 2.16
ARHGEF1-223	ENST00000617585	EYA3	Q99504	573 aa		28.55	■■■□□ 2.16
ARHGEF1-223	ENST00000617585	CREBZF	Q9NS37	354 aa		28.55	■■■□□ 2.16
ARHGEF1-223	ENST00000617585	GPRC5D	Q9NZD1	345 aa		28.55	■■■□□ 2.16
ARHGEF1-223	ENST00000617585	TNIP1	Q15025	636 aa		28.54	■■■□□ 2.16
ARHGEF1-223	ENST00000617585	USP50	Q70EL3	339 aa	Predicted RBP	28.54	■■■□□ 2.16
ARHGEF1-223	ENST00000617585	UBE3B	Q7Z3V4	1068 aa		28.53	■■■□□ 2.16
ARHGEF1-223	ENST00000617585	ANKRD18A	Q8IVF6	992 aa		28.53	■■■□□ 2.16
ARHGEF1-223	ENST00000617585	C6orf229	H3BNL8	230 aa		28.52	■■■□□ 2.16
ARHGEF1-223	ENST00000617585	CCER2	I3L3R5	266 aa		28.52	■■■□□ 2.16
ARHGEF1-223	ENST00000617585	CDC5L	Q99459	802 aa	Known RBP	28.52	■■■□□ 2.16
ARHGEF1-223	ENST00000617585	CLEC11A	Q9Y240	323 aa		28.52	■■■□□ 2.16
ARHGEF1-223	ENST00000617585	SPEF2	Q9C093	1822 aa		28.51	■■■□□ 2.15
ARHGEF1-223	ENST00000617585	CCDC85A	Q96PX6	553 aa	Predicted RBP	28.51	■■■□□ 2.15
ARHGEF1-223	ENST00000617585	ADARB2	Q9NS39	739 aa	Known RBP	28.51	■■■□□ 2.15
ARHGEF1-223	ENST00000617585	RAD17	O75943	681 aa		28.5	■■■□□ 2.15
ARHGEF1-223	ENST00000617585	CSF1R	P07333	972 aa		28.5	■■■□□ 2.15
ARHGEF1-223	ENST00000617585	GMPS	P49915	693 aa	Predicted RBP	28.5	■■■□□ 2.15
ARHGEF1-223	ENST00000617585	BEND3	Q5T5X7	828 aa		28.5	■■■□□ 2.15

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