RNA–Protein interactions for RNA: ENST00000616973.4

NR1H3-235, Transcript of nuclear receptor subfamily 1 group H member 3, humanhuman

TSL 1 (best) BASIC

Gene NR1H3, Length 1,919 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H3-235ENST00000616973 BRD1O95696 1058 aa18.9■□□□□ 0.62
NR1H3-235ENST00000616973 CSF1RP07333 972 aa18.9■□□□□ 0.62
NR1H3-235ENST00000616973 ZKSCAN1P17029 563 aaPredicted RBP18.9■□□□□ 0.62
NR1H3-235ENST00000616973 AK2P54819 239 aa18.9■□□□□ 0.62
NR1H3-235ENST00000616973 CREB3L3Q68CJ9 461 aa18.9■□□□□ 0.62
NR1H3-235ENST00000616973 ISY1Q9ULR0 285 aaKnown RBP18.9■□□□□ 0.62
NR1H3-235ENST00000616973 LIMCH1Q9UPQ0 1083 aa18.9■□□□□ 0.62
NR1H3-235ENST00000616973 PALLDQ8WX93 1383 aa18.9■□□□□ 0.62
NR1H3-235ENST00000616973 CASTP20810 708 aaKnown RBP18.9■□□□□ 0.62
NR1H3-235ENST00000616973 ZNF330Q9Y3S2 320 aaPredicted RBP18.9■□□□□ 0.62
NR1H3-235ENST00000616973 CYP46A1Q9Y6A2 500 aa18.9■□□□□ 0.62
NR1H3-235ENST00000616973 RPAP1Q9BWH6 1393 aaPredicted RBP18.89■□□□□ 0.61
NR1H3-235ENST00000616973 CCDC57Q2TAC2 916 aa18.89■□□□□ 0.61
NR1H3-235ENST00000616973 RNF20Q5VTR2 975 aa18.89■□□□□ 0.61
NR1H3-235ENST00000616973 NOL8Q76FK4 1167 aaKnown RBP18.89■□□□□ 0.61
NR1H3-235ENST00000616973 JAKMIP1Q96N16 626 aaKnown RBP18.89■□□□□ 0.61
NR1H3-235ENST00000616973 ERVV-1B6SEH8 477 aa18.88■□□□□ 0.61
NR1H3-235ENST00000616973 IL6STP40189 918 aaPredicted RBP18.88■□□□□ 0.61
NR1H3-235ENST00000616973 PRIM1P49642 420 aaKnown RBP18.88■□□□□ 0.61
NR1H3-235ENST00000616973 TSGA10IPQ3SY00 556 aa18.88■□□□□ 0.61
NR1H3-235ENST00000616973 LRRC24Q50LG9 513 aa18.88■□□□□ 0.61
NR1H3-235ENST00000616973 RUFY3Q7L099 469 aa18.88■□□□□ 0.61
NR1H3-235ENST00000616973 PPIL4Q8WUA2 492 aaKnown RBP eCLIP18.88■□□□□ 0.61
NR1H3-235ENST00000616973 EDC3Q96F86 508 aaKnown RBP18.88■□□□□ 0.61
NR1H3-235ENST00000616973 GZF1Q9H116 711 aaPredicted RBP18.88■□□□□ 0.61
NR1H3-235ENST00000616973 HMG20BQ9P0W2 317 aa18.88■□□□□ 0.61
NR1H3-235ENST00000616973 SLIT2O94813 1529 aa18.88■□□□□ 0.61
NR1H3-235ENST00000616973 GOLGA6L3A6NEY3 463 aa18.88■□□□□ 0.61
NR1H3-235ENST00000616973 SLC27A2O14975 620 aa18.88■□□□□ 0.61
NR1H3-235ENST00000616973 PSMA5P28066 241 aa18.88■□□□□ 0.61
NR1H3-235ENST00000616973 DDB1Q16531 1140 aa18.88■□□□□ 0.61
NR1H3-235ENST00000616973 KLHL40Q2TBA0 621 aa18.88■□□□□ 0.61
NR1H3-235ENST00000616973 ADCK5Q3MIX3 580 aa18.88■□□□□ 0.61
NR1H3-235ENST00000616973 USPL1Q5W0Q7 1092 aa18.88■□□□□ 0.61
NR1H3-235ENST00000616973 NLRP10Q86W26 655 aa18.88■□□□□ 0.61
NR1H3-235ENST00000616973 KBTBD3Q8NAB2 608 aa18.88■□□□□ 0.61
NR1H3-235ENST00000616973 ZNF594Q96JF6 807 aaPredicted RBP18.88■□□□□ 0.61
NR1H3-235ENST00000616973 TAF5LO75529 589 aa18.87■□□□□ 0.61
NR1H3-235ENST00000616973 KCNJ4P48050 445 aa18.87■□□□□ 0.61
NR1H3-235ENST00000616973 HLFQ16534 295 aa18.87■□□□□ 0.61
NR1H3-235ENST00000616973 MCTP1Q6DN14 999 aa18.87■□□□□ 0.61
NR1H3-235ENST00000616973 ZSCAN31Q96LW9 406 aaPredicted RBP18.87■□□□□ 0.61
NR1H3-235ENST00000616973 NEUROD6Q96NK8 337 aa18.87■□□□□ 0.61
NR1H3-235ENST00000616973 PDRG1Q9NUG6 133 aa18.87■□□□□ 0.61
NR1H3-235ENST00000616973 ZBTB1Q9Y2K1 713 aa18.87■□□□□ 0.61
NR1H3-235ENST00000616973 SPATA31A5Q5VU36 1347 aa18.87■□□□□ 0.61
NR1H3-235ENST00000616973 SPATA31A7Q8IWB4 1347 aa18.87■□□□□ 0.61
NR1H3-235ENST00000616973 ADAMTS2O95450 1211 aa18.86■□□□□ 0.61
NR1H3-235ENST00000616973 ZNF589Q86UQ0 364 aaPredicted RBP18.86■□□□□ 0.61
NR1H3-235ENST00000616973 SYTL4Q96C24 671 aaPredicted RBP18.86■□□□□ 0.61
NR1H3-235ENST00000616973 FAM89AQ96GI7 184 aa18.86■□□□□ 0.61
NR1H3-235ENST00000616973 DNAJC2Q99543 621 aaKnown RBP18.86■□□□□ 0.61
NR1H3-235ENST00000616973 ALDH8A1Q9H2A2 487 aaPredicted RBP18.86■□□□□ 0.61
NR1H3-235ENST00000616973 LMBRD1Q9NUN5 540 aa18.86■□□□□ 0.61
NR1H3-235ENST00000616973 CEP126Q9P2H0 1117 aa18.86■□□□□ 0.61
NR1H3-235ENST00000616973 SH3TC1Q8TE82 1336 aa18.86■□□□□ 0.61
NR1H3-235ENST00000616973 A0A1B0GUL7 405 aa18.86■□□□□ 0.61
NR1H3-235ENST00000616973 TIMM10P62072 90 aa18.86■□□□□ 0.61
NR1H3-235ENST00000616973 BARGINQ6ZT62 677 aa18.86■□□□□ 0.61
NR1H3-235ENST00000616973 PUS3Q9BZE2 481 aaKnown RBP18.86■□□□□ 0.61
NR1H3-235ENST00000616973 SH2B1Q9NRF2 756 aaPredicted RBP18.86■□□□□ 0.61
NR1H3-235ENST00000616973 AKAP2Q9Y2D5 859 aa18.86■□□□□ 0.61
NR1H3-235ENST00000616973 ZNF831Q5JPB2 1677 aa18.85■□□□□ 0.61
NR1H3-235ENST00000616973 MCMDC2Q4G0Z9 681 aa18.85■□□□□ 0.61
NR1H3-235ENST00000616973 ZSCAN21Q9Y5A6 473 aaPredicted RBP18.85■□□□□ 0.61
NR1H3-235ENST00000616973 MYH7P12883 1935 aa18.85■□□□□ 0.61
NR1H3-235ENST00000616973 IFIT5Q13325 482 aaKnown RBP18.84■□□□□ 0.61
NR1H3-235ENST00000616973 PAG1Q9NWQ8 432 aa18.84■□□□□ 0.61
NR1H3-235ENST00000616973 HELLSQ9NRZ9 838 aa18.84■□□□□ 0.61
NR1H3-235ENST00000616973 DDX49Q9Y6V7 483 aaKnown RBP18.84■□□□□ 0.61
NR1H3-235ENST00000616973 CPA1P15085 419 aa18.83■□□□□ 0.6
NR1H3-235ENST00000616973 U3KPZ7 1027 aaPredicted RBP18.83■□□□□ 0.6
NR1H3-235ENST00000616973 LAMA4Q16363 1823 aa18.83■□□□□ 0.6
NR1H3-235ENST00000616973 WDR33Q9C0J8 1336 aaKnown RBP18.83■□□□□ 0.6
NR1H3-235ENST00000616973 ABCC12Q96J65 1359 aa18.82■□□□□ 0.6
NR1H3-235ENST00000616973 KRT32Q14532 448 aa18.82■□□□□ 0.6
NR1H3-235ENST00000616973 DDX46Q7L014 1031 aaKnown RBP18.82■□□□□ 0.6
NR1H3-235ENST00000616973 DZIP3Q86Y13 1208 aaKnown RBP18.82■□□□□ 0.6
NR1H3-235ENST00000616973 ZNF34Q8IZ26 560 aa18.82■□□□□ 0.6
NR1H3-235ENST00000616973 TTLL11Q8NHH1 800 aa18.82■□□□□ 0.6
NR1H3-235ENST00000616973 ARXQ96QS3 562 aa18.82■□□□□ 0.6
NR1H3-235ENST00000616973 NDUFB9Q9Y6M9 179 aa18.82■□□□□ 0.6
NR1H3-235ENST00000616973 COL5A3P25940 1745 aaPredicted RBP18.82■□□□□ 0.6
NR1H3-235ENST00000616973 IFIT1P09914 478 aaKnown RBP18.82■□□□□ 0.6
NR1H3-235ENST00000616973 EIF5P55010 431 aaKnown RBP18.82■□□□□ 0.6
NR1H3-235ENST00000616973 MARCH10Q8NA82 808 aaPredicted RBP18.82■□□□□ 0.6
NR1H3-235ENST00000616973 MYH14Q7Z406 1995 aaKnown RBP18.81■□□□□ 0.6
NR1H3-235ENST00000616973 GOLIM4O00461 696 aa18.81■□□□□ 0.6
NR1H3-235ENST00000616973 TOM1O60784 492 aa18.81■□□□□ 0.6
NR1H3-235ENST00000616973 GPTP24298 496 aa18.81■□□□□ 0.6
NR1H3-235ENST00000616973 MRE11P49959 708 aa18.81■□□□□ 0.6
NR1H3-235ENST00000616973 CTSWP56202 376 aa18.81■□□□□ 0.6
NR1H3-235ENST00000616973 ANKRD1Q15327 319 aa18.81■□□□□ 0.6
NR1H3-235ENST00000616973 TAF7LQ5H9L4 462 aa18.81■□□□□ 0.6
NR1H3-235ENST00000616973 BLOC1S2Q6QNY1 142 aa18.81■□□□□ 0.6
NR1H3-235ENST00000616973 RIC1Q4ADV7 1423 aa18.81■□□□□ 0.6
NR1H3-235ENST00000616973 LRP5O75197 1615 aa18.81■□□□□ 0.6
NR1H3-235ENST00000616973 LAMB2P55268 1798 aa18.81■□□□□ 0.6
NR1H3-235ENST00000616973 TCHHQ07283 1943 aa18.81■□□□□ 0.6
NR1H3-235ENST00000616973 RPS6KB1P23443 525 aa18.8■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms