RNA–Protein interactions for RNA: ENST00000615671.1

GABPB1-212, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

Gene GABPB1, Length 6,266 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-212ENST00000615671 ANKRD13DQ6ZTN6 518 aa21.45■■□□□ 1.02
GABPB1-212ENST00000615671 MAATS1Q7Z4T9 603 aa21.45■■□□□ 1.02
GABPB1-212ENST00000615671 PKD2L1Q9P0L9 805 aa21.45■■□□□ 1.02
GABPB1-212ENST00000615671 XAGE3Q8WTP9 111 aa21.45■■□□□ 1.02
GABPB1-212ENST00000615671 ALS2CR12Q96Q35 445 aa21.45■■□□□ 1.02
GABPB1-212ENST00000615671 PRDM10Q9NQV6 1147 aa21.45■■□□□ 1.02
GABPB1-212ENST00000615671 KLF18A0A0U1RQI7 1052 aa21.45■■□□□ 1.02
GABPB1-212ENST00000615671 SMARCC2Q8TAQ2 1214 aa21.45■■□□□ 1.02
GABPB1-212ENST00000615671 C16orf45Q96MC5 204 aaPredicted RBP21.45■■□□□ 1.02
GABPB1-212ENST00000615671 IDI1Q13907 227 aa21.44■■□□□ 1.02
GABPB1-212ENST00000615671 HELBQ8NG08 1087 aaPredicted RBP21.44■■□□□ 1.02
GABPB1-212ENST00000615671 STX6O43752 255 aa21.44■■□□□ 1.02
GABPB1-212ENST00000615671 PARP3Q9Y6F1 533 aa21.44■■□□□ 1.02
GABPB1-212ENST00000615671 TRIM27P14373 513 aa21.44■■□□□ 1.02
GABPB1-212ENST00000615671 MIGA1Q8NAN2 632 aa21.44■■□□□ 1.02
GABPB1-212ENST00000615671 ZFP91Q96JP5 570 aaPredicted RBP21.44■■□□□ 1.02
GABPB1-212ENST00000615671 RNF216Q9NWF9 866 aaPredicted RBP21.44■■□□□ 1.02
GABPB1-212ENST00000615671 RRAGBQ5VZM2 374 aa21.44■■□□□ 1.02
GABPB1-212ENST00000615671 TSNARE1Q96NA8 513 aa21.44■■□□□ 1.02
GABPB1-212ENST00000615671 TCHPQ9BT92 498 aa21.44■■□□□ 1.02
GABPB1-212ENST00000615671 PDCL2Q8N4E4 241 aa21.43■■□□□ 1.02
GABPB1-212ENST00000615671 SLTMQ9NWH9 1034 aaKnown RBP eCLIP21.43■■□□□ 1.027e-7■■□□□ 14.1
GABPB1-212ENST00000615671 WDR97A6NE52 1622 aa21.43■■□□□ 1.02
GABPB1-212ENST00000615671 STAT6P42226 847 aa21.43■■□□□ 1.02
GABPB1-212ENST00000615671 ARID5AQ03989 594 aa21.43■■□□□ 1.02
GABPB1-212ENST00000615671 MSH6P52701 1360 aa21.43■■□□□ 1.02
GABPB1-212ENST00000615671 CBX1P83916 185 aa21.42■■□□□ 1.02
GABPB1-212ENST00000615671 NAPAP54920 295 aa21.42■■□□□ 1.02
GABPB1-212ENST00000615671 NAA16Q6N069 864 aaPredicted RBP21.42■■□□□ 1.02
GABPB1-212ENST00000615671 PAIP2Q9BPZ3 127 aaKnown RBP21.42■■□□□ 1.02
GABPB1-212ENST00000615671 SYNJ1O43426 1573 aa21.42■■□□□ 1.02
GABPB1-212ENST00000615671 CHST3Q7LGC8 479 aa21.42■■□□□ 1.02
GABPB1-212ENST00000615671 LRRC59Q96AG4 307 aaKnown RBP21.42■■□□□ 1.02
GABPB1-212ENST00000615671 SIRT1Q96EB6 747 aa21.42■■□□□ 1.02
GABPB1-212ENST00000615671 NLRP3Q96P20 1036 aa21.42■■□□□ 1.02
GABPB1-212ENST00000615671 POLD1P28340 1107 aa21.42■■□□□ 1.02
GABPB1-212ENST00000615671 COPS6Q7L5N1 327 aa21.42■■□□□ 1.02
GABPB1-212ENST00000615671 DMRT2Q9Y5R5 561 aa21.42■■□□□ 1.02
GABPB1-212ENST00000615671 NOS1P29475 1434 aa21.41■■□□□ 1.02
GABPB1-212ENST00000615671 ATP2B3Q16720 1220 aa21.41■■□□□ 1.02
GABPB1-212ENST00000615671 PPP1R14CQ8TAE6 165 aa21.41■■□□□ 1.02
GABPB1-212ENST00000615671 MAP9Q49MG5 647 aa21.41■■□□□ 1.02
GABPB1-212ENST00000615671 ZNF804AQ7Z570 1209 aa21.41■■□□□ 1.02
GABPB1-212ENST00000615671 CC2D2AQ9P2K1 1620 aa21.41■■□□□ 1.02
GABPB1-212ENST00000615671 DDB1Q16531 1140 aa21.41■■□□□ 1.02
GABPB1-212ENST00000615671 TBC1D5Q92609 795 aa21.41■■□□□ 1.02
GABPB1-212ENST00000615671 PTPRCP08575 1304 aa21.41■■□□□ 1.02
GABPB1-212ENST00000615671 TAOK3Q9H2K8 898 aa21.4■■□□□ 1.02
GABPB1-212ENST00000615671 FAM107BQ9H098 131 aa21.4■■□□□ 1.02
GABPB1-212ENST00000615671 CIZ1Q9ULV3 898 aaPredicted RBP21.4■■□□□ 1.02
GABPB1-212ENST00000615671 NKTRP30414 1462 aaKnown RBP21.4■■□□□ 1.02
GABPB1-212ENST00000615671 FERP16591 822 aa21.4■■□□□ 1.02
GABPB1-212ENST00000615671 KIF18AQ8NI77 898 aa21.4■■□□□ 1.02
GABPB1-212ENST00000615671 SAP30BPQ9UHR5 308 aaKnown RBP21.4■■□□□ 1.02
GABPB1-212ENST00000615671 ACTN2P35609 894 aa21.4■■□□□ 1.02
GABPB1-212ENST00000615671 TBC1D9Q6ZT07 1266 aa21.4■■□□□ 1.02
GABPB1-212ENST00000615671 PLIN2Q99541 437 aa21.4■■□□□ 1.02
GABPB1-212ENST00000615671 NSFL1CQ9UNZ2 370 aaKnown RBP21.4■■□□□ 1.02
GABPB1-212ENST00000615671 FSD2A1L4K1 749 aa21.39■■□□□ 1.02
GABPB1-212ENST00000615671 FAM114A1Q8IWE2 563 aa21.39■■□□□ 1.02
GABPB1-212ENST00000615671 PROCA1Q8NCQ7 364 aaPredicted RBP21.39■■□□□ 1.02
GABPB1-212ENST00000615671 STX1AQ16623 288 aa21.39■■□□□ 1.01
GABPB1-212ENST00000615671 TRERF1Q96PN7 1200 aa21.39■■□□□ 1.01
GABPB1-212ENST00000615671 GBP3Q9H0R5 595 aa21.39■■□□□ 1.01
GABPB1-212ENST00000615671 PIK3R4Q99570 1358 aa21.39■■□□□ 1.01
GABPB1-212ENST00000615671 UQCRFS1P1P0C7P4 283 aa21.39■■□□□ 1.01
GABPB1-212ENST00000615671 FERMT1Q9BQL6 677 aa21.39■■□□□ 1.01
GABPB1-212ENST00000615671 DZIP3Q86Y13 1208 aaKnown RBP21.39■■□□□ 1.01
GABPB1-212ENST00000615671 BRF1Q92994 677 aa21.39■■□□□ 1.01
GABPB1-212ENST00000615671 MAGEB6P1A0A0J9YX57 407 aa21.39■■□□□ 1.01
GABPB1-212ENST00000615671 TOM1O60784 492 aa21.39■■□□□ 1.01
GABPB1-212ENST00000615671 ATP2C2O75185 946 aa21.39■■□□□ 1.01
GABPB1-212ENST00000615671 MARCKSP29966 332 aaPredicted RBP21.39■■□□□ 1.01
GABPB1-212ENST00000615671 MCM5P33992 734 aa21.38■■□□□ 1.01
GABPB1-212ENST00000615671 TAF12Q16514 161 aa21.38■■□□□ 1.01
GABPB1-212ENST00000615671 ERMNQ8TAM6 284 aa21.38■■□□□ 1.01
GABPB1-212ENST00000615671 ALG1Q9BT22 464 aa21.38■■□□□ 1.01
GABPB1-212ENST00000615671 SRRTQ9BXP5 876 aaKnown RBP21.38■■□□□ 1.01
GABPB1-212ENST00000615671 PTGS1P23219 599 aa21.38■■□□□ 1.01
GABPB1-212ENST00000615671 APBB1IPQ7Z5R6 666 aaPredicted RBP21.38■■□□□ 1.01
GABPB1-212ENST00000615671 IKBKGQ9Y6K9 419 aa21.38■■□□□ 1.01
GABPB1-212ENST00000615671 PA2G4Q9UQ80 394 aaKnown RBP21.38■■□□□ 1.01
GABPB1-212ENST00000615671 CAMSAP2Q08AD1 1489 aa21.38■■□□□ 1.01
GABPB1-212ENST00000615671 RTN1Q16799 776 aa21.38■■□□□ 1.01
GABPB1-212ENST00000615671 EEF2P13639 858 aaKnown RBP21.37■■□□□ 1.01
GABPB1-212ENST00000615671 CCDC141Q6ZP82 1450 aa21.37■■□□□ 1.01
GABPB1-212ENST00000615671 ZBTB43O43298 467 aa21.37■■□□□ 1.01
GABPB1-212ENST00000615671 ABCC5O15440 1437 aa21.37■■□□□ 1.01
GABPB1-212ENST00000615671 PRKG1Q13976 671 aa21.37■■□□□ 1.01
GABPB1-212ENST00000615671 JDP2Q8WYK2 163 aa21.37■■□□□ 1.01
GABPB1-212ENST00000615671 TOPBP1Q92547 1522 aa21.37■■□□□ 1.01
GABPB1-212ENST00000615671 KRT13P13646 458 aa21.37■■□□□ 1.01
GABPB1-212ENST00000615671 SLC9C2Q5TAH2 1124 aa21.37■■□□□ 1.01
GABPB1-212ENST00000615671 GIGYF2Q6Y7W6 1299 aaKnown RBP21.37■■□□□ 1.01
GABPB1-212ENST00000615671 N4BP3O15049 544 aa21.36■■□□□ 1.01
GABPB1-212ENST00000615671 LRSAM1Q6UWE0 723 aa21.36■■□□□ 1.01
GABPB1-212ENST00000615671 CADPS2Q86UW7 1296 aa21.36■■□□□ 1.01
GABPB1-212ENST00000615671 MAGEB6Q8N7X4 407 aa21.36■■□□□ 1.01
GABPB1-212ENST00000615671 TNPO1Q92973 898 aaKnown RBP21.36■■□□□ 1.01
GABPB1-212ENST00000615671 RXRAP19793 462 aa21.36■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms