RNA–Protein interactions for RNA: ENST00000613854.1

HIST1H3A-201, Transcript of histone cluster 1 H3 family member a, humanhuman

APPRIS P1 BASIC

Gene HIST1H3A, Length 411 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H3A-201ENST00000613854 TRIM27P14373 513 aa13.75□□□□□ -0.21
HIST1H3A-201ENST00000613854 CTSWP56202 376 aa13.75□□□□□ -0.21
HIST1H3A-201ENST00000613854 SF3B3Q15393 1217 aaKnown RBP13.75□□□□□ -0.21
HIST1H3A-201ENST00000613854 CCDC152Q4G0S7 254 aa13.75□□□□□ -0.21
HIST1H3A-201ENST00000613854 ZKSCAN2Q63HK3 967 aa13.75□□□□□ -0.21
HIST1H3A-201ENST00000613854 ATF7IPQ6VMQ6 1270 aa13.75□□□□□ -0.21
HIST1H3A-201ENST00000613854 CRAMP1Q96RY5 1269 aa13.75□□□□□ -0.21
HIST1H3A-201ENST00000613854 SEC31BQ9NQW1 1179 aa13.75□□□□□ -0.21
HIST1H3A-201ENST00000613854 RCAN3Q9UKA8 241 aa13.75□□□□□ -0.21
HIST1H3A-201ENST00000613854 CHMP3Q9Y3E7 222 aa13.75□□□□□ -0.21
HIST1H3A-201ENST00000613854 NBPF7P0C2Y1 421 aaPredicted RBP13.74□□□□□ -0.21
HIST1H3A-201ENST00000613854 CCT4P50991 539 aaKnown RBP13.74□□□□□ -0.21
HIST1H3A-201ENST00000613854 GRAPQ13588 217 aa13.74□□□□□ -0.21
HIST1H3A-201ENST00000613854 GRAPLQ8TC17 118 aaPredicted RBP13.74□□□□□ -0.21
HIST1H3A-201ENST00000613854 ARHGAP45Q92619 1136 aa13.74□□□□□ -0.21
HIST1H3A-201ENST00000613854 CELF1Q92879 486 aaKnown RBP13.74□□□□□ -0.21
HIST1H3A-201ENST00000613854 SUCLG2Q96I99 432 aa13.74□□□□□ -0.21
HIST1H3A-201ENST00000613854 COL4A1P02462 1669 aa13.74□□□□□ -0.21
HIST1H3A-201ENST00000613854 PLIN1O60240 522 aa13.73□□□□□ -0.21
HIST1H3A-201ENST00000613854 CCDC93Q567U6 631 aa13.73□□□□□ -0.21
HIST1H3A-201ENST00000613854 EPHA10Q5JZY3 1008 aa13.73□□□□□ -0.21
HIST1H3A-201ENST00000613854 TTLL11Q8NHH1 800 aa13.73□□□□□ -0.21
HIST1H3A-201ENST00000613854 C7orf43Q8WVR3 580 aa13.73□□□□□ -0.21
HIST1H3A-201ENST00000613854 GREM2Q9H772 168 aa13.73□□□□□ -0.21
HIST1H3A-201ENST00000613854 CCDC88AQ3V6T2 1871 aa13.73□□□□□ -0.21
HIST1H3A-201ENST00000613854 SPEF2Q9C093 1822 aa13.73□□□□□ -0.21
HIST1H3A-201ENST00000613854 NFKBIEO00221 500 aa13.72□□□□□ -0.21
HIST1H3A-201ENST00000613854 FOXO4P98177 505 aa13.72□□□□□ -0.21
HIST1H3A-201ENST00000613854 FTSJ3Q8IY81 847 aaKnown RBP13.72□□□□□ -0.21
HIST1H3A-201ENST00000613854 TMEM57Q8N5G2 664 aa13.72□□□□□ -0.21
HIST1H3A-201ENST00000613854 USP44Q9H0E7 712 aa13.72□□□□□ -0.21
HIST1H3A-201ENST00000613854 UTRNP46939 3433 aa13.72□□□□□ -0.21
HIST1H3A-201ENST00000613854 BBOX1O75936 387 aa13.71□□□□□ -0.21
HIST1H3A-201ENST00000613854 YY1P25490 414 aa13.71□□□□□ -0.21
HIST1H3A-201ENST00000613854 RPS8P62241 208 aaKnown RBP13.71□□□□□ -0.21
HIST1H3A-201ENST00000613854 FAM161AQ3B820 660 aa13.71□□□□□ -0.21
HIST1H3A-201ENST00000613854 SOGA3Q5TF21 947 aa13.71□□□□□ -0.21
HIST1H3A-201ENST00000613854 C9orf131Q5VYM1 1079 aa13.71□□□□□ -0.21
HIST1H3A-201ENST00000613854 LMBR1LQ6UX01 489 aa13.71□□□□□ -0.21
HIST1H3A-201ENST00000613854 PLA2G12BQ9BX93 195 aa13.71□□□□□ -0.21
HIST1H3A-201ENST00000613854 TMX4Q9H1E5 349 aaPredicted RBP13.71□□□□□ -0.21
HIST1H3A-201ENST00000613854 SBF1O95248 1867 aa13.71□□□□□ -0.21
HIST1H3A-201ENST00000613854 FER1L6Q2WGJ9 1857 aa13.71□□□□□ -0.21
HIST1H3A-201ENST00000613854 RLBP1P12271 317 aa13.7□□□□□ -0.22
HIST1H3A-201ENST00000613854 ITGA6P23229 1130 aa13.7□□□□□ -0.22
HIST1H3A-201ENST00000613854 PRELPP51888 382 aa13.7□□□□□ -0.22
HIST1H3A-201ENST00000613854 ANKRD18AQ8IVF6 992 aa13.7□□□□□ -0.22
HIST1H3A-201ENST00000613854 DZIP1LQ8IYY4 767 aaKnown RBP13.7□□□□□ -0.22
HIST1H3A-201ENST00000613854 PANK1Q8TE04 598 aa13.7□□□□□ -0.22
HIST1H3A-201ENST00000613854 MEIS3Q99687 375 aa13.7□□□□□ -0.22
HIST1H3A-201ENST00000613854 TAOK3Q9H2K8 898 aa13.7□□□□□ -0.22
HIST1H3A-201ENST00000613854 BICC1Q9H694 974 aaKnown RBP13.7□□□□□ -0.22
HIST1H3A-201ENST00000613854 RNF181Q9P0P0 153 aa13.7□□□□□ -0.22
HIST1H3A-201ENST00000613854 ATP6V0A2Q9Y487 856 aa13.7□□□□□ -0.22
HIST1H3A-201ENST00000613854 UTYO14607 1347 aa13.69□□□□□ -0.22
HIST1H3A-201ENST00000613854 CSF1RP07333 972 aa13.69□□□□□ -0.22
HIST1H3A-201ENST00000613854 UBTFL1P0CB47 393 aaPredicted RBP13.69□□□□□ -0.22
HIST1H3A-201ENST00000613854 INTS3Q68E01 1043 aaKnown RBP13.69□□□□□ -0.22
HIST1H3A-201ENST00000613854 SP8Q8IXZ3 490 aa13.69□□□□□ -0.22
HIST1H3A-201ENST00000613854 RTKN2Q8IZC4 609 aa13.69□□□□□ -0.22
HIST1H3A-201ENST00000613854 KAZALD1Q96I82 304 aa13.69□□□□□ -0.22
HIST1H3A-201ENST00000613854 ZNF277Q9NRM2 450 aaPredicted RBP13.69□□□□□ -0.22
HIST1H3A-201ENST00000613854 ANKRD18BA2A2Z9 1011 aa13.68□□□□□ -0.22
HIST1H3A-201ENST00000613854 LMNB1P20700 586 aa13.68□□□□□ -0.22
HIST1H3A-201ENST00000613854 FKBP4Q02790 459 aaKnown RBP eCLIP13.68□□□□□ -0.22
HIST1H3A-201ENST00000613854 ITPRIPQ8IWB1 547 aa13.68□□□□□ -0.22
HIST1H3A-201ENST00000613854 ZNF594Q96JF6 807 aaPredicted RBP13.68□□□□□ -0.22
HIST1H3A-201ENST00000613854 CDC5LQ99459 802 aaKnown RBP13.68□□□□□ -0.22
HIST1H3A-201ENST00000613854 IGHMBP2P38935 993 aaKnown RBP13.67□□□□□ -0.22
HIST1H3A-201ENST00000613854 GPSM2P81274 684 aa13.67□□□□□ -0.22
HIST1H3A-201ENST00000613854 IFIT5Q13325 482 aaKnown RBP13.67□□□□□ -0.22
HIST1H3A-201ENST00000613854 CCDC57Q2TAC2 916 aa13.67□□□□□ -0.22
HIST1H3A-201ENST00000613854 TAF7LQ5H9L4 462 aa13.67□□□□□ -0.22
HIST1H3A-201ENST00000613854 CC2D2BQ6DHV5 1058 aa13.67□□□□□ -0.22
HIST1H3A-201ENST00000613854 DPP8Q6V1X1 898 aaPredicted RBP13.67□□□□□ -0.22
HIST1H3A-201ENST00000613854 MPNDQ8N594 471 aa13.67□□□□□ -0.22
HIST1H3A-201ENST00000613854 ANKRD44Q8N8A2 993 aa13.67□□□□□ -0.22
HIST1H3A-201ENST00000613854 NSFL1CQ9UNZ2 370 aaKnown RBP13.67□□□□□ -0.22
HIST1H3A-201ENST00000613854 LRRFIP2Q9Y608 721 aaKnown RBP13.67□□□□□ -0.22
HIST1H3A-201ENST00000613854 ZNF526Q8TF50 670 aaPredicted RBP13.66□□□□□ -0.22
HIST1H3A-201ENST00000613854 GPR101Q96P66 508 aaPredicted RBP13.66□□□□□ -0.22
HIST1H3A-201ENST00000613854 MPHOSPH8Q99549 860 aa13.66□□□□□ -0.22
HIST1H3A-201ENST00000613854 RTL9Q8NET4 1388 aa13.66□□□□□ -0.22
HIST1H3A-201ENST00000613854 C6orf229H3BNL8 230 aa13.65□□□□□ -0.22
HIST1H3A-201ENST00000613854 GNAI3P08754 354 aa13.65□□□□□ -0.22
HIST1H3A-201ENST00000613854 C20orf194Q5TEA3 1177 aa13.65□□□□□ -0.22
HIST1H3A-201ENST00000613854 TMC4Q7Z404 712 aa13.65□□□□□ -0.22
HIST1H3A-201ENST00000613854 ANKIB1Q9P2G1 1089 aa13.65□□□□□ -0.22
HIST1H3A-201ENST00000613854 LTBP3Q9NS15 1303 aa13.64□□□□□ -0.23
HIST1H3A-201ENST00000613854 IARSP41252 1262 aaKnown RBP13.64□□□□□ -0.23
HIST1H3A-201ENST00000613854 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.64□□□□□ -0.23
HIST1H3A-201ENST00000613854 KLHDC4Q8TBB5 520 aa13.64□□□□□ -0.23
HIST1H3A-201ENST00000613854 PSMD1Q99460 953 aa13.64□□□□□ -0.23
HIST1H3A-201ENST00000613854 C1orf115Q9H7X2 142 aa13.64□□□□□ -0.23
HIST1H3A-201ENST00000613854 BSDC1Q9NW68 430 aaPredicted RBP13.64□□□□□ -0.23
HIST1H3A-201ENST00000613854 COG6Q9Y2V7 657 aa13.64□□□□□ -0.23
HIST1H3A-201ENST00000613854 DICER1Q9UPY3 1922 aaKnown RBP13.64□□□□□ -0.23
HIST1H3A-201ENST00000613854 LRRC37AA6NMS7 1700 aa13.64□□□□□ -0.23
HIST1H3A-201ENST00000613854 SNED1Q8TER0 1413 aa13.64□□□□□ -0.23
HIST1H3A-201ENST00000613854 WTIPA6NIX2 430 aaPredicted RBP13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms