RNA–Protein interactions for RNA: ENST00000613459.4

HMGXB3-206, Transcript of HMG-box containing 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene HMGXB3, Length 5,567 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-206ENST00000613459 MPRIPQ6WCQ1 1025 aa19.92■□□□□ 0.78
HMGXB3-206ENST00000613459 RRAGDQ9NQL2 400 aaPredicted RBP19.92■□□□□ 0.78
HMGXB3-206ENST00000613459 MBIPQ9NS73 344 aa19.92■□□□□ 0.78
HMGXB3-206ENST00000613459 NUP160Q12769 1436 aa19.92■□□□□ 0.78
HMGXB3-206ENST00000613459 SYKP43405 635 aa19.92■□□□□ 0.78
HMGXB3-206ENST00000613459 ZGPATQ8N5A5 531 aaKnown RBP19.92■□□□□ 0.78
HMGXB3-206ENST00000613459 GPATCH11Q8N954 259 aa19.92■□□□□ 0.78
HMGXB3-206ENST00000613459 IBSPP21815 317 aaPredicted RBP19.91■□□□□ 0.78
HMGXB3-206ENST00000613459 LDHAL6AQ6ZMR3 332 aa19.91■□□□□ 0.78
HMGXB3-206ENST00000613459 TTC12Q9H892 705 aaPredicted RBP19.91■□□□□ 0.78
HMGXB3-206ENST00000613459 TSPY2A6NKD2 308 aa19.91■□□□□ 0.78
HMGXB3-206ENST00000613459 SPDYE4A6NLX3 237 aa19.91■□□□□ 0.78
HMGXB3-206ENST00000613459 TBCAO75347 108 aaKnown RBP19.91■□□□□ 0.78
HMGXB3-206ENST00000613459 CCDC155Q8N6L0 562 aa19.91■□□□□ 0.78
HMGXB3-206ENST00000613459 FAM200AQ8TCP9 573 aa19.91■□□□□ 0.78
HMGXB3-206ENST00000613459 RHPN1Q8TCX5 695 aa19.91■□□□□ 0.78
HMGXB3-206ENST00000613459 TBC1D5Q92609 795 aa19.91■□□□□ 0.78
HMGXB3-206ENST00000613459 N4BP3O15049 544 aa19.9■□□□□ 0.78
HMGXB3-206ENST00000613459 GNG11P61952 73 aa19.9■□□□□ 0.78
HMGXB3-206ENST00000613459 IDEP14735 1019 aa19.9■□□□□ 0.78
HMGXB3-206ENST00000613459 TMX3Q96JJ7 454 aa19.9■□□□□ 0.78
HMGXB3-206ENST00000613459 TRIM47Q96LD4 638 aa19.9■□□□□ 0.78
HMGXB3-206ENST00000613459 NSRP1Q9H0G5 558 aaKnown RBP19.9■□□□□ 0.78
HMGXB3-206ENST00000613459 TFIP11Q9UBB9 837 aaKnown RBP19.9■□□□□ 0.78
HMGXB3-206ENST00000613459 ADGRF5Q8IZF2 1346 aa19.9■□□□□ 0.78
HMGXB3-206ENST00000613459 TRERF1Q96PN7 1200 aa19.89■□□□□ 0.78
HMGXB3-206ENST00000613459 SLC26A6Q9BXS9 759 aa19.89■□□□□ 0.78
HMGXB3-206ENST00000613459 WTAPQ15007 396 aa19.89■□□□□ 0.77
HMGXB3-206ENST00000613459 MRPS27Q92552 414 aaKnown RBP19.89■□□□□ 0.77
HMGXB3-206ENST00000613459 AMOTL2Q9Y2J4 779 aa19.89■□□□□ 0.77
HMGXB3-206ENST00000613459 HSPA4P34932 840 aa19.89■□□□□ 0.77
HMGXB3-206ENST00000613459 ACTN2P35609 894 aa19.89■□□□□ 0.77
HMGXB3-206ENST00000613459 TCERG1LQ5VWI1 586 aa19.89■□□□□ 0.77
HMGXB3-206ENST00000613459 STMN4Q9H169 189 aaPredicted RBP19.89■□□□□ 0.77
HMGXB3-206ENST00000613459 DNA2P51530 1060 aa19.89■□□□□ 0.77
HMGXB3-206ENST00000613459 NOS1P29475 1434 aa19.89■□□□□ 0.77
HMGXB3-206ENST00000613459 TSNARE1Q96NA8 513 aa19.89■□□□□ 0.77
HMGXB3-206ENST00000613459 JADE2Q9NQC1 790 aa19.89■□□□□ 0.77
HMGXB3-206ENST00000613459 NOP2P46087 812 aaKnown RBP19.88■□□□□ 0.77
HMGXB3-206ENST00000613459 DDX46Q7L014 1031 aaKnown RBP19.88■□□□□ 0.77
HMGXB3-206ENST00000613459 SREK1Q8WXA9 508 aaKnown RBP19.88■□□□□ 0.77
HMGXB3-206ENST00000613459 SELENOOQ9BVL4 669 aa19.88■□□□□ 0.77
HMGXB3-206ENST00000613459 RASAL2Q9UJF2 1139 aa19.88■□□□□ 0.77
HMGXB3-206ENST00000613459 EXOC5O00471 708 aa19.88■□□□□ 0.77
HMGXB3-206ENST00000613459 KIAA0753Q2KHM9 967 aa19.88■□□□□ 0.77
HMGXB3-206ENST00000613459 AKR1B10O60218 316 aa19.88■□□□□ 0.77
HMGXB3-206ENST00000613459 NOLC1Q14978 699 aaKnown RBP eCLIP19.88■□□□□ 0.77
HMGXB3-206ENST00000613459 CCDC174Q6PII3 467 aa19.88■□□□□ 0.77
HMGXB3-206ENST00000613459 SYCP3Q8IZU3 236 aa19.88■□□□□ 0.77
HMGXB3-206ENST00000613459 PRC1O43663 620 aa19.88■□□□□ 0.77
HMGXB3-206ENST00000613459 UBASH3AP57075 661 aa19.88■□□□□ 0.77
HMGXB3-206ENST00000613459 ESR2Q92731 530 aa19.88■□□□□ 0.77
HMGXB3-206ENST00000613459 ASXL1Q8IXJ9 1541 aa19.88■□□□□ 0.77
HMGXB3-206ENST00000613459 CTAGE15A4D2H0 777 aa19.87■□□□□ 0.77
HMGXB3-206ENST00000613459 BIN1O00499 593 aa19.87■□□□□ 0.77
HMGXB3-206ENST00000613459 ZBTB43O43298 467 aa19.87■□□□□ 0.77
HMGXB3-206ENST00000613459 TUBBP07437 444 aa19.87■□□□□ 0.77
HMGXB3-206ENST00000613459 CTAGE8P0CG41 777 aa19.87■□□□□ 0.77
HMGXB3-206ENST00000613459 HS1BP3Q53T59 392 aa19.87■□□□□ 0.77
HMGXB3-206ENST00000613459 CTAGE6Q86UF2 777 aa19.87■□□□□ 0.77
HMGXB3-206ENST00000613459 CTAGE4Q8IX94 777 aa19.87■□□□□ 0.77
HMGXB3-206ENST00000613459 CCDC82Q8N4S0 544 aa19.87■□□□□ 0.77
HMGXB3-206ENST00000613459 LRRC45Q96CN5 670 aa19.87■□□□□ 0.77
HMGXB3-206ENST00000613459 CCDC152Q4G0S7 254 aa19.87■□□□□ 0.77
HMGXB3-206ENST00000613459 MICU3Q86XE3 530 aa19.87■□□□□ 0.77
HMGXB3-206ENST00000613459 ANKRD44Q8N8A2 993 aa19.87■□□□□ 0.77
HMGXB3-206ENST00000613459 CALM1P0DP23 149 aa19.87■□□□□ 0.77
HMGXB3-206ENST00000613459 CALM2P0DP24 149 aa19.87■□□□□ 0.77
HMGXB3-206ENST00000613459 CALM3P0DP25 149 aa19.87■□□□□ 0.77
HMGXB3-206ENST00000613459 SOS1Q07889 1333 aaPredicted RBP19.87■□□□□ 0.77
HMGXB3-206ENST00000613459 MNAT1P51948 309 aa19.86■□□□□ 0.77
HMGXB3-206ENST00000613459 ARFGAP3Q9NP61 516 aa19.86■□□□□ 0.77
HMGXB3-206ENST00000613459 OPA1O60313 960 aa19.86■□□□□ 0.77
HMGXB3-206ENST00000613459 USHBP1Q8N6Y0 703 aa19.86■□□□□ 0.77
HMGXB3-206ENST00000613459 LMBR1Q8WVP7 490 aa19.86■□□□□ 0.77
HMGXB3-206ENST00000613459 HOMER2Q9NSB8 354 aa19.86■□□□□ 0.77
HMGXB3-206ENST00000613459 TTC41PQ6P2S7 1318 aa19.86■□□□□ 0.77
HMGXB3-206ENST00000613459 CCDC97Q96F63 343 aaPredicted RBP19.86■□□□□ 0.77
HMGXB3-206ENST00000613459 ESYT1Q9BSJ8 1104 aa19.86■□□□□ 0.77
HMGXB3-206ENST00000613459 GDPD2Q9HCC8 539 aa19.86■□□□□ 0.77
HMGXB3-206ENST00000613459 KLF18A0A0U1RQI7 1052 aa19.86■□□□□ 0.77
HMGXB3-206ENST00000613459 MACROD2A1Z1Q3 448 aa19.86■□□□□ 0.77
HMGXB3-206ENST00000613459 LAMC3Q9Y6N6 1575 aa19.85■□□□□ 0.77
HMGXB3-206ENST00000613459 PI4KAP2A4QPH2 592 aa19.85■□□□□ 0.77
HMGXB3-206ENST00000613459 PI4KAP1Q8N8J0 262 aa19.85■□□□□ 0.77
HMGXB3-206ENST00000613459 PSMA7O14818 248 aa19.85■□□□□ 0.77
HMGXB3-206ENST00000613459 PUS7Q96PZ0 661 aaKnown RBP19.85■□□□□ 0.77
HMGXB3-206ENST00000613459 IKBKGQ9Y6K9 419 aa19.85■□□□□ 0.77
HMGXB3-206ENST00000613459 FERP16591 822 aa19.85■□□□□ 0.77
HMGXB3-206ENST00000613459 GTF2A1P52655 376 aaPredicted RBP19.85■□□□□ 0.77
HMGXB3-206ENST00000613459 KRT83P78385 493 aa19.85■□□□□ 0.77
HMGXB3-206ENST00000613459 MCMDC2Q4G0Z9 681 aa19.85■□□□□ 0.77
HMGXB3-206ENST00000613459 RRAGBQ5VZM2 374 aa19.85■□□□□ 0.77
HMGXB3-206ENST00000613459 FMNL3Q8IVF7 1028 aa19.84■□□□□ 0.77
HMGXB3-206ENST00000613459 CCDC77Q9BR77 488 aa19.84■□□□□ 0.77
HMGXB3-206ENST00000613459 RTL9Q8NET4 1388 aa19.84■□□□□ 0.77
HMGXB3-206ENST00000613459 IPO4Q8TEX9 1081 aaKnown RBP19.84■□□□□ 0.77
HMGXB3-206ENST00000613459 TACC1O75410 805 aa19.84■□□□□ 0.77
HMGXB3-206ENST00000613459 GNAT2P19087 354 aa19.84■□□□□ 0.77
HMGXB3-206ENST00000613459 RTN1Q16799 776 aa19.84■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms