RNA–Protein interactions for RNA: ENST00000612708.4

SLC1A3-215, Transcript of solute carrier family 1 member 3, humanhuman

TSL 5 BASIC

Gene SLC1A3, Length 3,832 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A3-215ENST00000612708 NAP1L2Q9ULW6 460 aaPredicted RBP6.95□□□□□ -1.3
SLC1A3-215ENST00000612708 AK2P54819 239 aa6.94□□□□□ -1.3
SLC1A3-215ENST00000612708 CWC27Q6UX04 472 aaKnown RBP6.94□□□□□ -1.3
SLC1A3-215ENST00000612708 NPHP3Q7Z494 1330 aa6.94□□□□□ -1.3
SLC1A3-215ENST00000612708 SURF6O75683 361 aaKnown RBP6.94□□□□□ -1.3
SLC1A3-215ENST00000612708 ZRSR1Q15695 479 aaKnown RBP6.94□□□□□ -1.3
SLC1A3-215ENST00000612708 LARP1BQ659C4 914 aaKnown RBP6.94□□□□□ -1.3
SLC1A3-215ENST00000612708 CLIP2Q9UDT6 1046 aa6.94□□□□□ -1.3
SLC1A3-215ENST00000612708 PAXBP1Q9Y5B6 917 aa6.94□□□□□ -1.3
SLC1A3-215ENST00000612708 BECN2A8MW95 431 aa6.94□□□□□ -1.3
SLC1A3-215ENST00000612708 GABPB1Q06547 395 aaPredicted RBP6.94□□□□□ -1.3
SLC1A3-215ENST00000612708 CNTROBQ8N137 903 aa6.94□□□□□ -1.3
SLC1A3-215ENST00000612708 KRT222Q8N1A0 295 aa6.94□□□□□ -1.3
SLC1A3-215ENST00000612708 DDX54Q8TDD1 881 aaKnown RBP6.94□□□□□ -1.3
SLC1A3-215ENST00000612708 JAKMIP1Q96N16 626 aaKnown RBP6.94□□□□□ -1.3
SLC1A3-215ENST00000612708 PDRG1Q9NUG6 133 aa6.94□□□□□ -1.3
SLC1A3-215ENST00000612708 NOL12Q9UGY1 213 aaKnown RBP eCLIP6.94□□□□□ -1.3
SLC1A3-215ENST00000612708 V9GYY5 206 aaPredicted RBP6.94□□□□□ -1.3
SLC1A3-215ENST00000612708 UBTFL1P0CB47 393 aaPredicted RBP6.93□□□□□ -1.3
SLC1A3-215ENST00000612708 ZKSCAN1P17029 563 aaPredicted RBP6.93□□□□□ -1.3
SLC1A3-215ENST00000612708 MMP14P50281 582 aa6.93□□□□□ -1.3
SLC1A3-215ENST00000612708 TYRO3Q06418 890 aa6.93□□□□□ -1.3
SLC1A3-215ENST00000612708 LRMPQ12912 555 aa6.93□□□□□ -1.3
SLC1A3-215ENST00000612708 NKX1-1Q15270 411 aaPredicted RBP6.93□□□□□ -1.3
SLC1A3-215ENST00000612708 CEP135Q66GS9 1140 aa6.93□□□□□ -1.3
SLC1A3-215ENST00000612708 RUFY2Q8WXA3 655 aa6.93□□□□□ -1.3
SLC1A3-215ENST00000612708 KCNF1Q9H3M0 494 aa6.93□□□□□ -1.3
SLC1A3-215ENST00000612708 OSBPL3Q9H4L5 887 aa6.93□□□□□ -1.3
SLC1A3-215ENST00000612708 SPG7Q9UQ90 795 aa6.93□□□□□ -1.3
SLC1A3-215ENST00000612708 CYP46A1Q9Y6A2 500 aa6.93□□□□□ -1.3
SLC1A3-215ENST00000612708 AFDNP55196 1824 aaKnown RBP6.93□□□□□ -1.3
SLC1A3-215ENST00000612708 KCPQ6ZWJ8 1503 aa6.93□□□□□ -1.3
SLC1A3-215ENST00000612708 LRRC37AA6NMS7 1700 aa6.93□□□□□ -1.3
SLC1A3-215ENST00000612708 BTAF1O14981 1849 aa6.93□□□□□ -1.3
SLC1A3-215ENST00000612708 CPA1P15085 419 aa6.93□□□□□ -1.3
SLC1A3-215ENST00000612708 ANO6Q4KMQ2 910 aa6.93□□□□□ -1.3
SLC1A3-215ENST00000612708 NCBP1Q09161 790 aaKnown RBP6.93□□□□□ -1.3
SLC1A3-215ENST00000612708 PTPN14Q15678 1187 aa6.93□□□□□ -1.3
SLC1A3-215ENST00000612708 TMEM87AQ8NBN3 555 aa6.93□□□□□ -1.3
SLC1A3-215ENST00000612708 ANKRD7Q92527 254 aa6.93□□□□□ -1.3
SLC1A3-215ENST00000612708 SPATA32Q96LK8 384 aa6.93□□□□□ -1.3
SLC1A3-215ENST00000612708 C10orf71Q711Q0 1435 aa6.93□□□□□ -1.3
SLC1A3-215ENST00000612708 NRDCO43847 1150 aa6.92□□□□□ -1.3
SLC1A3-215ENST00000612708 LRRFIP2Q9Y608 721 aaKnown RBP6.92□□□□□ -1.3
SLC1A3-215ENST00000612708 VGLL3A8MV65 326 aa6.92□□□□□ -1.3
SLC1A3-215ENST00000612708 HSPA4P34932 840 aa6.92□□□□□ -1.3
SLC1A3-215ENST00000612708 G2E3Q7L622 706 aa6.92□□□□□ -1.3
SLC1A3-215ENST00000612708 FILIP1Q7Z7B0 1213 aa6.92□□□□□ -1.3
SLC1A3-215ENST00000612708 ZSCAN31Q96LW9 406 aaPredicted RBP6.92□□□□□ -1.3
SLC1A3-215ENST00000612708 TRMT1Q9NXH9 659 aaKnown RBP6.92□□□□□ -1.3
SLC1A3-215ENST00000612708 BCCIPQ9P287 314 aaKnown RBP eCLIP6.92□□□□□ -1.3
SLC1A3-215ENST00000612708 TFIP11Q9UBB9 837 aaKnown RBP6.92□□□□□ -1.3
SLC1A3-215ENST00000612708 THRAP3Q9Y2W1 955 aaKnown RBP6.92□□□□□ -1.3
SLC1A3-215ENST00000612708 TULP1O00294 542 aaPredicted RBP6.92□□□□□ -1.3
SLC1A3-215ENST00000612708 PDCP20941 246 aa6.92□□□□□ -1.3
SLC1A3-215ENST00000612708 ZNF165P49910 485 aa6.92□□□□□ -1.3
SLC1A3-215ENST00000612708 NAA30Q147X3 362 aaPredicted RBP6.92□□□□□ -1.3
SLC1A3-215ENST00000612708 PRPF40BQ6NWY9 871 aaKnown RBP6.92□□□□□ -1.3
SLC1A3-215ENST00000612708 UNC5CLQ8IV45 518 aa6.92□□□□□ -1.3
SLC1A3-215ENST00000612708 NECAB1Q8N987 351 aa6.92□□□□□ -1.3
SLC1A3-215ENST00000612708 IP6K1Q92551 441 aa6.92□□□□□ -1.3
SLC1A3-215ENST00000612708 FBXW7Q969H0 707 aa6.92□□□□□ -1.3
SLC1A3-215ENST00000612708 TRERF1Q96PN7 1200 aa6.92□□□□□ -1.3
SLC1A3-215ENST00000612708 CDCA7Q9BWT1 371 aaPredicted RBP6.92□□□□□ -1.3
SLC1A3-215ENST00000612708 DACT1Q9NYF0 836 aa6.92□□□□□ -1.3
SLC1A3-215ENST00000612708 SNX14Q9Y5W7 946 aa6.92□□□□□ -1.3
SLC1A3-215ENST00000612708 TNNT3P45378 269 aaPredicted RBP6.91□□□□□ -1.3
SLC1A3-215ENST00000612708 RBM6P78332 1123 aaKnown RBP6.91□□□□□ -1.3
SLC1A3-215ENST00000612708 TIGD1Q96MW7 591 aa6.91□□□□□ -1.3
SLC1A3-215ENST00000612708 NRBP1Q9UHY1 535 aa6.91□□□□□ -1.3
SLC1A3-215ENST00000612708 PNMA6EA0A0J9YXQ4 647 aa6.91□□□□□ -1.3
SLC1A3-215ENST00000612708 H3BQV1 296 aa6.91□□□□□ -1.3
SLC1A3-215ENST00000612708 IFFO2Q5TF58 517 aa6.91□□□□□ -1.3
SLC1A3-215ENST00000612708 ZNF397Q8NF99 534 aaPredicted RBP6.91□□□□□ -1.3
SLC1A3-215ENST00000612708 CBX8Q9HC52 389 aa6.91□□□□□ -1.3
SLC1A3-215ENST00000612708 SH2B1Q9NRF2 756 aaPredicted RBP6.91□□□□□ -1.3
SLC1A3-215ENST00000612708 CTIFO43310 598 aaKnown RBP6.91□□□□□ -1.3
SLC1A3-215ENST00000612708 ATP8B2P98198 1209 aa6.91□□□□□ -1.3
SLC1A3-215ENST00000612708 ZSCAN25Q6NSZ9 544 aa6.91□□□□□ -1.3
SLC1A3-215ENST00000612708 FAM173BQ6P4H8 233 aa6.91□□□□□ -1.3
SLC1A3-215ENST00000612708 RUFY3Q7L099 469 aa6.91□□□□□ -1.3
SLC1A3-215ENST00000612708 GPATCH3Q96I76 525 aa6.91□□□□□ -1.3
SLC1A3-215ENST00000612708 DNAJC25Q9H1X3 360 aa6.91□□□□□ -1.3
SLC1A3-215ENST00000612708 CTNNA3Q9UI47 895 aa6.91□□□□□ -1.3
SLC1A3-215ENST00000612708 CHL1O00533 1208 aa6.9□□□□□ -1.3
SLC1A3-215ENST00000612708 AP5Z1O43299 807 aa6.9□□□□□ -1.3
SLC1A3-215ENST00000612708 HSP90B1P14625 803 aaKnown RBP6.9□□□□□ -1.3
SLC1A3-215ENST00000612708 ZNF75DP51815 510 aa6.9□□□□□ -1.3
SLC1A3-215ENST00000612708 STK3Q13188 491 aa6.9□□□□□ -1.3
SLC1A3-215ENST00000612708 CCDC30Q5VVM6 783 aa6.9□□□□□ -1.3
SLC1A3-215ENST00000612708 DHX37Q8IY37 1157 aaKnown RBP6.9□□□□□ -1.3
SLC1A3-215ENST00000612708 SCAND2PQ9GZW5 306 aaPredicted RBP6.9□□□□□ -1.3
SLC1A3-215ENST00000612708 TMEM51Q9NW97 253 aa6.9□□□□□ -1.3
SLC1A3-215ENST00000612708 CALCOCO1Q9P1Z2 691 aa6.9□□□□□ -1.3
SLC1A3-215ENST00000612708 CEBPZQ03701 1054 aaKnown RBP6.9□□□□□ -1.3
SLC1A3-215ENST00000612708 HSP90AB2PQ58FF8 381 aa6.9□□□□□ -1.3
SLC1A3-215ENST00000612708 KIF18AQ8NI77 898 aa6.9□□□□□ -1.3
SLC1A3-215ENST00000612708 DDX19AQ9NUU7 478 aaKnown RBP6.9□□□□□ -1.3
SLC1A3-215ENST00000612708 RPAP1Q9BWH6 1393 aaPredicted RBP6.9□□□□□ -1.31
SLC1A3-215ENST00000612708 DOT1LQ8TEK3 1739 aa6.9□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms