RNA–Protein interactions for RNA: ENST00000611614.4

COPS7B-223, Transcript of COP9 signalosome subunit 7B, humanhuman

TSL 3 BASIC

Gene COPS7B, Length 2,468 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7B-223ENST00000611614 CASP7P55210 303 aa16.76■□□□□ 0.27
COPS7B-223ENST00000611614 CNTNAP4Q9C0A0 1308 aa16.76■□□□□ 0.27
COPS7B-223ENST00000611614 KCNQ4P56696 695 aa16.75■□□□□ 0.27
COPS7B-223ENST00000611614 RABL6Q3YEC7 729 aaPredicted RBP16.75■□□□□ 0.27
COPS7B-223ENST00000611614 EPHA10Q5JZY3 1008 aa16.75■□□□□ 0.27
COPS7B-223ENST00000611614 ZBTB38Q8NAP3 1195 aaPredicted RBP16.75■□□□□ 0.27
COPS7B-223ENST00000611614 USP42Q9H9J4 1324 aaKnown RBP16.75■□□□□ 0.27
COPS7B-223ENST00000611614 PCCAP05165 728 aaPredicted RBP16.75■□□□□ 0.27
COPS7B-223ENST00000611614 CCDC173Q0VFZ6 552 aa16.75■□□□□ 0.27
COPS7B-223ENST00000611614 RC3H1Q5TC82 1133 aaKnown RBP16.75■□□□□ 0.27
COPS7B-223ENST00000611614 LMBR1LQ6UX01 489 aa16.75■□□□□ 0.27
COPS7B-223ENST00000611614 NLRP10Q86W26 655 aa16.75■□□□□ 0.27
COPS7B-223ENST00000611614 PALD1Q9ULE6 856 aa16.75■□□□□ 0.27
COPS7B-223ENST00000611614 PA2G4Q9UQ80 394 aaKnown RBP16.75■□□□□ 0.27
COPS7B-223ENST00000611614 BTAF1O14981 1849 aa16.74■□□□□ 0.27
COPS7B-223ENST00000611614 CLASRPQ8N2M8 674 aaKnown RBP16.74■□□□□ 0.27
COPS7B-223ENST00000611614 ZGPATQ8N5A5 531 aaKnown RBP16.74■□□□□ 0.27
COPS7B-223ENST00000611614 CICQ96RK0 1608 aaPredicted RBP16.74■□□□□ 0.27
COPS7B-223ENST00000611614 FAM89AQ96GI7 184 aa16.74■□□□□ 0.27
COPS7B-223ENST00000611614 TRMT112Q9UI30 125 aaKnown RBP16.74■□□□□ 0.27
COPS7B-223ENST00000611614 ZNF831Q5JPB2 1677 aa16.73■□□□□ 0.27
COPS7B-223ENST00000611614 KLHL40Q2TBA0 621 aa16.73■□□□□ 0.27
COPS7B-223ENST00000611614 GLIPR1L2Q4G1C9 344 aa16.73■□□□□ 0.27
COPS7B-223ENST00000611614 CNTROBQ8N137 903 aa16.73■□□□□ 0.27
COPS7B-223ENST00000611614 TTC41PQ6P2S7 1318 aa16.73■□□□□ 0.27
COPS7B-223ENST00000611614 MAP4K4O95819 1239 aaPredicted RBP16.73■□□□□ 0.27
COPS7B-223ENST00000611614 HMGB2P26583 209 aaKnown RBP16.73■□□□□ 0.27
COPS7B-223ENST00000611614 GAS2L3Q86XJ1 694 aa16.73■□□□□ 0.27
COPS7B-223ENST00000611614 TMX3Q96JJ7 454 aa16.73■□□□□ 0.27
COPS7B-223ENST00000611614 PPP1R9BQ96SB3 815 aa16.73■□□□□ 0.27
COPS7B-223ENST00000611614 SIL1Q9H173 461 aa16.73■□□□□ 0.27
COPS7B-223ENST00000611614 TRIM37O94972 964 aa16.72■□□□□ 0.27
COPS7B-223ENST00000611614 FOXO4P98177 505 aa16.72■□□□□ 0.27
COPS7B-223ENST00000611614 RTCBQ9Y3I0 505 aaKnown RBP16.72■□□□□ 0.27
COPS7B-223ENST00000611614 GNPATO15228 680 aa16.72■□□□□ 0.27
COPS7B-223ENST00000611614 RRP9O43818 475 aaKnown RBP16.72■□□□□ 0.27
COPS7B-223ENST00000611614 RPS6KA4O75676 772 aa16.72■□□□□ 0.27
COPS7B-223ENST00000611614 CAMTA2O94983 1202 aa16.72■□□□□ 0.27
COPS7B-223ENST00000611614 PARP10Q53GL7 1025 aa16.72■□□□□ 0.27
COPS7B-223ENST00000611614 ANP32BQ92688 251 aaKnown RBP16.72■□□□□ 0.27
COPS7B-223ENST00000611614 COPRSQ9NQ92 184 aa16.72■□□□□ 0.27
COPS7B-223ENST00000611614 AK9Q5TCS8 1911 aa16.72■□□□□ 0.27
COPS7B-223ENST00000611614 CLEC4GQ6UXB4 293 aa16.71■□□□□ 0.27
COPS7B-223ENST00000611614 ZNF34Q8IZ26 560 aa16.71■□□□□ 0.27
COPS7B-223ENST00000611614 IL25Q9H293 177 aa16.71■□□□□ 0.27
COPS7B-223ENST00000611614 SGSM2O43147 1006 aa16.71■□□□□ 0.26
COPS7B-223ENST00000611614 GLRX3O76003 335 aaKnown RBP16.71■□□□□ 0.26
COPS7B-223ENST00000611614 HSPA4P34932 840 aa16.71■□□□□ 0.26
COPS7B-223ENST00000611614 PKP1Q13835 747 aa16.71■□□□□ 0.26
COPS7B-223ENST00000611614 HSP90B1P14625 803 aaKnown RBP16.7■□□□□ 0.26
COPS7B-223ENST00000611614 CUL4AQ13619 759 aa16.7■□□□□ 0.26
COPS7B-223ENST00000611614 CCDC57Q2TAC2 916 aa16.7■□□□□ 0.26
COPS7B-223ENST00000611614 GPATCH3Q96I76 525 aa16.7■□□□□ 0.26
COPS7B-223ENST00000611614 AK7Q96M32 723 aa16.7■□□□□ 0.26
COPS7B-223ENST00000611614 NIP7Q9Y221 180 aaKnown RBP eCLIP16.7■□□□□ 0.26
COPS7B-223ENST00000611614 CDHR2Q9BYE9 1310 aa16.7■□□□□ 0.26
COPS7B-223ENST00000611614 TPM2P07951 284 aa16.7■□□□□ 0.26
COPS7B-223ENST00000611614 IFIT2P09913 472 aaKnown RBP16.7■□□□□ 0.26
COPS7B-223ENST00000611614 MCTP1Q6DN14 999 aa16.7■□□□□ 0.26
COPS7B-223ENST00000611614 PLA2G12BQ9BX93 195 aa16.7■□□□□ 0.26
COPS7B-223ENST00000611614 ZPR1O75312 459 aa16.69■□□□□ 0.26
COPS7B-223ENST00000611614 PTPN12Q05209 780 aaKnown RBP16.69■□□□□ 0.26
COPS7B-223ENST00000611614 SLC27A3Q5K4L6 730 aa16.69■□□□□ 0.26
COPS7B-223ENST00000611614 KLHDC4Q8TBB5 520 aa16.69■□□□□ 0.26
COPS7B-223ENST00000611614 UTP14AQ9BVJ6 771 aaKnown RBP16.69■□□□□ 0.26
COPS7B-223ENST00000611614 ZDHHC9Q9Y397 364 aa16.69■□□□□ 0.26
COPS7B-223ENST00000611614 MYH14Q7Z406 1995 aaKnown RBP16.69■□□□□ 0.26
COPS7B-223ENST00000611614 IRS4O14654 1257 aaPredicted RBP16.69■□□□□ 0.26
COPS7B-223ENST00000611614 INTS4Q96HW7 963 aaKnown RBP16.69■□□□□ 0.26
COPS7B-223ENST00000611614 ECHDC1Q9NTX5 307 aa16.69■□□□□ 0.26
COPS7B-223ENST00000611614 DDX49Q9Y6V7 483 aaKnown RBP16.69■□□□□ 0.26
COPS7B-223ENST00000611614 RAD50Q92878 1312 aa16.69■□□□□ 0.26
COPS7B-223ENST00000611614 RREB1Q92766 1687 aa16.69■□□□□ 0.26
COPS7B-223ENST00000611614 COL5A3P25940 1745 aaPredicted RBP16.69■□□□□ 0.26
COPS7B-223ENST00000611614 SBF2Q86WG5 1849 aa16.69■□□□□ 0.26
COPS7B-223ENST00000611614 RGL2O15211 777 aa16.68■□□□□ 0.26
COPS7B-223ENST00000611614 ZNF445P59923 1031 aa16.68■□□□□ 0.26
COPS7B-223ENST00000611614 TAF7LQ5H9L4 462 aa16.68■□□□□ 0.26
COPS7B-223ENST00000611614 RFX5P48382 616 aaPredicted RBP16.68■□□□□ 0.26
COPS7B-223ENST00000611614 NASPP49321 788 aaPredicted RBP16.68■□□□□ 0.26
COPS7B-223ENST00000611614 LSG1Q9H089 658 aaKnown RBP16.68■□□□□ 0.26
COPS7B-223ENST00000611614 UBN2Q6ZU65 1347 aa16.67■□□□□ 0.26
COPS7B-223ENST00000611614 SH3TC1Q8TE82 1336 aa16.67■□□□□ 0.26
COPS7B-223ENST00000611614 FAM177BA6PVY3 158 aa16.67■□□□□ 0.26
COPS7B-223ENST00000611614 LMBRD1Q9NUN5 540 aa16.67■□□□□ 0.26
COPS7B-223ENST00000611614 PDE8AO60658 829 aa16.67■□□□□ 0.26
COPS7B-223ENST00000611614 IFIT5Q13325 482 aaKnown RBP16.67■□□□□ 0.26
COPS7B-223ENST00000611614 AACSQ86V21 672 aa16.67■□□□□ 0.26
COPS7B-223ENST00000611614 NARFQ9UHQ1 456 aa16.67■□□□□ 0.26
COPS7B-223ENST00000611614 SASH1O94885 1247 aa16.66■□□□□ 0.26
COPS7B-223ENST00000611614 RFC4P35249 363 aa16.66■□□□□ 0.26
COPS7B-223ENST00000611614 TRAPPC3LQ5T215 181 aa16.66■□□□□ 0.26
COPS7B-223ENST00000611614 SUSD4Q5VX71 490 aa16.66■□□□□ 0.26
COPS7B-223ENST00000611614 KIAA1211Q6ZU35 1233 aa16.66■□□□□ 0.26
COPS7B-223ENST00000611614 UPF3BQ9BZI7 483 aaKnown RBP16.66■□□□□ 0.26
COPS7B-223ENST00000611614 NUP98P52948 1817 aa16.66■□□□□ 0.26
COPS7B-223ENST00000611614 BRWD3Q6RI45 1802 aa16.66■□□□□ 0.26
COPS7B-223ENST00000611614 HS1BP3Q53T59 392 aa16.65■□□□□ 0.26
COPS7B-223ENST00000611614 CTSWP56202 376 aa16.65■□□□□ 0.26
COPS7B-223ENST00000611614 HSP90AA2PQ14568 343 aaPredicted RBP16.65■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms