RNA–Protein interactions for RNA: ENST00000611132.4

VPS36-207, Transcript of vacuolar protein sorting 36 homolog, humanhuman

TSL 1 (best) BASIC

Gene VPS36, Length 4,607 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-207ENST00000611132 AMOTQ4VCS5 1084 aa16.91■□□□□ 0.3
VPS36-207ENST00000611132 PATL2C9JE40 543 aaKnown RBP16.9■□□□□ 0.3
VPS36-207ENST00000611132 PDE4CQ08493 712 aa16.9■□□□□ 0.3
VPS36-207ENST00000611132 LRMPQ12912 555 aa16.9■□□□□ 0.3
VPS36-207ENST00000611132 FAM160A1Q05DH4 1040 aa16.9■□□□□ 0.3
VPS36-207ENST00000611132 MCM6Q14566 821 aa16.9■□□□□ 0.3
VPS36-207ENST00000611132 DDX46Q7L014 1031 aaKnown RBP16.9■□□□□ 0.3
VPS36-207ENST00000611132 KIAA1524Q8TCG1 905 aa16.9■□□□□ 0.3
VPS36-207ENST00000611132 ZNF213O14771 459 aa16.9■□□□□ 0.3
VPS36-207ENST00000611132 SMARCC1Q92922 1105 aaPredicted RBP16.9■□□□□ 0.3
VPS36-207ENST00000611132 OSBPL3Q9H4L5 887 aa16.9■□□□□ 0.3
VPS36-207ENST00000611132 SHTN1A0MZ66 631 aa16.9■□□□□ 0.3
VPS36-207ENST00000611132 FAM107BQ9H098 131 aa16.9■□□□□ 0.3
VPS36-207ENST00000611132 CDC37L1Q7L3B6 337 aa16.89■□□□□ 0.29
VPS36-207ENST00000611132 AMOTL1Q8IY63 956 aa16.89■□□□□ 0.29
VPS36-207ENST00000611132 MTMR6Q9Y217 621 aa16.89■□□□□ 0.29
VPS36-207ENST00000611132 GOLGA6L10A6NI86 522 aa16.89■□□□□ 0.29
VPS36-207ENST00000611132 IVLP07476 585 aa16.89■□□□□ 0.29
VPS36-207ENST00000611132 MCMDC2Q4G0Z9 681 aa16.89■□□□□ 0.29
VPS36-207ENST00000611132 TRIM34Q9BYJ4 488 aa16.89■□□□□ 0.29
VPS36-207ENST00000611132 TM6SF1Q9BZW5 370 aa16.89■□□□□ 0.29
VPS36-207ENST00000611132 KIAA0232Q92628 1395 aa16.89■□□□□ 0.29
VPS36-207ENST00000611132 YTHDC2Q9H6S0 1430 aaKnown RBP16.89■□□□□ 0.29
VPS36-207ENST00000611132 SPTLC2O15270 562 aa16.89■□□□□ 0.29
VPS36-207ENST00000611132 ATL3Q6DD88 541 aa16.89■□□□□ 0.29
VPS36-207ENST00000611132 RPS6KB1P23443 525 aa16.89■□□□□ 0.29
VPS36-207ENST00000611132 GRM8O00222 908 aa16.88■□□□□ 0.29
VPS36-207ENST00000611132 EIF5P55010 431 aaKnown RBP16.88■□□□□ 0.29
VPS36-207ENST00000611132 CABP4P57796 275 aa16.88■□□□□ 0.29
VPS36-207ENST00000611132 PTPDC1A2A3K4 754 aa16.88■□□□□ 0.29
VPS36-207ENST00000611132 IDH1O75874 414 aaKnown RBP16.88■□□□□ 0.29
VPS36-207ENST00000611132 LIG1P18858 919 aa16.88■□□□□ 0.29
VPS36-207ENST00000611132 GOLGA1Q92805 767 aa16.88■□□□□ 0.29
VPS36-207ENST00000611132 KIF2CQ99661 725 aa16.88■□□□□ 0.29
VPS36-207ENST00000611132 RAI14Q9P0K7 980 aa16.88■□□□□ 0.29
VPS36-207ENST00000611132 FAM135BQ49AJ0 1406 aa16.88■□□□□ 0.29
VPS36-207ENST00000611132 A0A087WZG4 1122 aa16.87■□□□□ 0.29
VPS36-207ENST00000611132 CCDC191Q8NCU4 936 aa16.87■□□□□ 0.29
VPS36-207ENST00000611132 PHAXQ9H814 394 aaKnown RBP16.87■□□□□ 0.29
VPS36-207ENST00000611132 SLC27A2O14975 620 aa16.87■□□□□ 0.29
VPS36-207ENST00000611132 HAND2P61296 217 aa16.87■□□□□ 0.29
VPS36-207ENST00000611132 KCNH5Q8NCM2 988 aa16.87■□□□□ 0.29
VPS36-207ENST00000611132 ZFP91Q96JP5 570 aaPredicted RBP16.87■□□□□ 0.29
VPS36-207ENST00000611132 UBAC1Q9BSL1 405 aa16.87■□□□□ 0.29
VPS36-207ENST00000611132 KLF18A0A0U1RQI7 1052 aa16.87■□□□□ 0.29
VPS36-207ENST00000611132 KSR2Q6VAB6 950 aa16.87■□□□□ 0.29
VPS36-207ENST00000611132 LUC7LQ9NQ29 371 aaKnown RBP16.87■□□□□ 0.29
VPS36-207ENST00000611132 AKAP2Q9Y2D5 859 aa16.87■□□□□ 0.29
VPS36-207ENST00000611132 EVCP57679 992 aa16.86■□□□□ 0.29
VPS36-207ENST00000611132 RAB11FIP4Q86YS3 637 aa16.86■□□□□ 0.29
VPS36-207ENST00000611132 NUP88Q99567 741 aaPredicted RBP16.86■□□□□ 0.29
VPS36-207ENST00000611132 ZNF215Q9UL58 517 aaPredicted RBP16.86■□□□□ 0.29
VPS36-207ENST00000611132 HSP90AA4PQ58FG1 418 aa16.86■□□□□ 0.29
VPS36-207ENST00000611132 CAPN2P17655 700 aa16.86■□□□□ 0.29
VPS36-207ENST00000611132 IARSP41252 1262 aaKnown RBP16.86■□□□□ 0.29
VPS36-207ENST00000611132 TARBP1Q13395 1621 aaKnown RBP16.86■□□□□ 0.29
VPS36-207ENST00000611132 ME3Q16798 604 aa16.85■□□□□ 0.29
VPS36-207ENST00000611132 DHX32Q7L7V1 743 aaKnown RBP16.85■□□□□ 0.29
VPS36-207ENST00000611132 TTC6Q86TZ1 520 aa16.85■□□□□ 0.29
VPS36-207ENST00000611132 AIDAQ96BJ3 306 aa16.85■□□□□ 0.29
VPS36-207ENST00000611132 UTP14AQ9BVJ6 771 aaKnown RBP16.85■□□□□ 0.29
VPS36-207ENST00000611132 TDO2P48775 406 aa16.85■□□□□ 0.29
VPS36-207ENST00000611132 UBE3BQ7Z3V4 1068 aa16.85■□□□□ 0.29
VPS36-207ENST00000611132 A0A1B0GVL5 298 aa16.85■□□□□ 0.29
VPS36-207ENST00000611132 MARCKSP29966 332 aaPredicted RBP16.85■□□□□ 0.29
VPS36-207ENST00000611132 EPS15P42566 896 aa16.85■□□□□ 0.29
VPS36-207ENST00000611132 NCOA7Q8NI08 942 aa16.85■□□□□ 0.29
VPS36-207ENST00000611132 IMPACTQ9P2X3 320 aa16.85■□□□□ 0.29
VPS36-207ENST00000611132 SAMD9LQ8IVG5 1584 aa16.85■□□□□ 0.29
VPS36-207ENST00000611132 GOLGA8AA7E2F4 631 aa16.85■□□□□ 0.29
VPS36-207ENST00000611132 APOBRQ0VD83 1088 aa16.85■□□□□ 0.29
VPS36-207ENST00000611132 KIF6Q6ZMV9 814 aa16.85■□□□□ 0.29
VPS36-207ENST00000611132 LINS1Q8NG48 757 aa16.85■□□□□ 0.29
VPS36-207ENST00000611132 YEATS4O95619 227 aa16.84■□□□□ 0.29
VPS36-207ENST00000611132 EVA1CP58658 441 aa16.84■□□□□ 0.29
VPS36-207ENST00000611132 TTC21AQ8NDW8 1320 aa16.84■□□□□ 0.29
VPS36-207ENST00000611132 EDC4Q6P2E9 1401 aaKnown RBP16.84■□□□□ 0.29
VPS36-207ENST00000611132 TRPM2O94759 1503 aa16.84■□□□□ 0.29
VPS36-207ENST00000611132 CCDC196A0A1B0GTZ2 297 aa16.84■□□□□ 0.29
VPS36-207ENST00000611132 CTAGE15A4D2H0 777 aa16.84■□□□□ 0.29
VPS36-207ENST00000611132 CTAGE8P0CG41 777 aa16.84■□□□□ 0.29
VPS36-207ENST00000611132 KANK3Q6NY19 840 aa16.84■□□□□ 0.29
VPS36-207ENST00000611132 CTAGE6Q86UF2 777 aa16.84■□□□□ 0.29
VPS36-207ENST00000611132 CTAGE4Q8IX94 777 aa16.84■□□□□ 0.29
VPS36-207ENST00000611132 CCDC175P0C221 793 aa16.84■□□□□ 0.29
VPS36-207ENST00000611132 CEP112Q8N8E3 955 aa16.84■□□□□ 0.29
VPS36-207ENST00000611132 FLT4P35916 1363 aa16.84■□□□□ 0.29
VPS36-207ENST00000611132 EYA1Q99502 592 aa16.84■□□□□ 0.29
VPS36-207ENST00000611132 CENPHQ9H3R5 247 aa16.84■□□□□ 0.29
VPS36-207ENST00000611132 METAP2P50579 478 aaKnown RBP eCLIP16.83■□□□□ 0.29
VPS36-207ENST00000611132 SSRP1Q08945 709 aaKnown RBP16.83■□□□□ 0.29
VPS36-207ENST00000611132 CTR9Q6PD62 1173 aa16.83■□□□□ 0.29
VPS36-207ENST00000611132 CCDC85AQ96PX6 553 aaPredicted RBP16.83■□□□□ 0.29
VPS36-207ENST00000611132 RASSF4Q9H2L5 321 aa16.83■□□□□ 0.29
VPS36-207ENST00000611132 SLC12A7Q9Y666 1083 aa16.83■□□□□ 0.29
VPS36-207ENST00000611132 CCDC82Q8N4S0 544 aa16.83■□□□□ 0.28
VPS36-207ENST00000611132 FAM227BQ96M60 508 aa16.83■□□□□ 0.28
VPS36-207ENST00000611132 STAP2Q9UGK3 403 aa16.83■□□□□ 0.28
VPS36-207ENST00000611132 RSPH14Q9UHP6 348 aa16.83■□□□□ 0.28
VPS36-207ENST00000611132 MICU3Q86XE3 530 aa16.83■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms