RNA–Protein interactions for RNA: ENST00000610756.4

TCF3-219, Transcript of transcription factor 3, humanhuman

TSL 1 (best)

Gene TCF3, Length 1,343 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF3-219ENST00000610756 RBM46Q8TBY0 533 aaKnown RBP24.66■■□□□ 1.54
TCF3-219ENST00000610756 NEURL1BA8MQ27 555 aa24.65■■□□□ 1.54
TCF3-219ENST00000610756 FZD9O00144 591 aa24.65■■□□□ 1.54
TCF3-219ENST00000610756 JDP2Q8WYK2 163 aa24.65■■□□□ 1.54
TCF3-219ENST00000610756 RTFDC1Q9BY42 306 aaPredicted RBP24.65■■□□□ 1.54
TCF3-219ENST00000610756 DDNO94850 711 aaPredicted RBP24.64■■□□□ 1.54
TCF3-219ENST00000610756 SLFN5Q08AF3 891 aa24.64■■□□□ 1.54
TCF3-219ENST00000610756 CWF19L2Q2TBE0 894 aaKnown RBP24.64■■□□□ 1.54
TCF3-219ENST00000610756 DNAAF4Q8WXU2 420 aa24.64■■□□□ 1.54
TCF3-219ENST00000610756 JARID2Q92833 1246 aaPredicted RBP24.64■■□□□ 1.54
TCF3-219ENST00000610756 DICER1Q9UPY3 1922 aaKnown RBP24.64■■□□□ 1.53
TCF3-219ENST00000610756 CDHR2Q9BYE9 1310 aa24.64■■□□□ 1.53
TCF3-219ENST00000610756 DIEXFQ68CQ4 756 aaKnown RBP24.63■■□□□ 1.53
TCF3-219ENST00000610756 MPNDQ8N594 471 aa24.63■■□□□ 1.53
TCF3-219ENST00000610756 SUPT20HQ8NEM7 779 aa24.63■■□□□ 1.53
TCF3-219ENST00000610756 CELF1Q92879 486 aaKnown RBP24.63■■□□□ 1.53
TCF3-219ENST00000610756 H7C1W4 665 aa24.62■■□□□ 1.53
TCF3-219ENST00000610756 RPS8P62241 208 aaKnown RBP24.62■■□□□ 1.53
TCF3-219ENST00000610756 CCDC152Q4G0S7 254 aa24.62■■□□□ 1.53
TCF3-219ENST00000610756 DPP8Q6V1X1 898 aaPredicted RBP24.62■■□□□ 1.53
TCF3-219ENST00000610756 LINS1Q8NG48 757 aa24.62■■□□□ 1.53
TCF3-219ENST00000610756 HSPA6P17066 643 aa24.61■■□□□ 1.53
TCF3-219ENST00000610756 LARGE2Q8N3Y3 721 aa24.61■■□□□ 1.53
TCF3-219ENST00000610756 TIAM2Q8IVF5 1701 aa24.61■■□□□ 1.53
TCF3-219ENST00000610756 FSTL1Q12841 308 aa24.61■■□□□ 1.53
TCF3-219ENST00000610756 GCKRQ14397 625 aa24.61■■□□□ 1.53
TCF3-219ENST00000610756 L3MBTL3Q96JM7 780 aaPredicted RBP24.61■■□□□ 1.53
TCF3-219ENST00000610756 DDX60Q8IY21 1712 aaKnown RBP24.6■■□□□ 1.53
TCF3-219ENST00000610756 LAMB2P55268 1798 aa24.6■■□□□ 1.53
TCF3-219ENST00000610756 TRMT2AQ8IZ69 625 aaKnown RBP24.59■■□□□ 1.53
TCF3-219ENST00000610756 SEC31BQ9NQW1 1179 aa24.59■■□□□ 1.53
TCF3-219ENST00000610756 ZNF541Q9H0D2 1346 aa24.58■■□□□ 1.53
TCF3-219ENST00000610756 PPIP5K2O43314 1243 aa24.58■■□□□ 1.52
TCF3-219ENST00000610756 MIER1Q8N108 512 aa24.58■■□□□ 1.52
TCF3-219ENST00000610756 GPC2Q8N158 579 aa24.58■■□□□ 1.52
TCF3-219ENST00000610756 TTLL11Q8NHH1 800 aa24.58■■□□□ 1.52
TCF3-219ENST00000610756 CDCA7LQ96GN5 454 aa24.58■■□□□ 1.52
TCF3-219ENST00000610756 CACNA1FO60840 1977 aa24.57■■□□□ 1.52
TCF3-219ENST00000610756 IQCA1LA6NCM1 817 aa24.57■■□□□ 1.52
TCF3-219ENST00000610756 F6X3S4 739 aa24.57■■□□□ 1.52
TCF3-219ENST00000610756 CTSWP56202 376 aa24.57■■□□□ 1.52
TCF3-219ENST00000610756 EIF6P56537 245 aaKnown RBP24.57■■□□□ 1.52
TCF3-219ENST00000610756 AOC3Q16853 763 aa24.57■■□□□ 1.52
TCF3-219ENST00000610756 BEND3Q5T5X7 828 aa24.57■■□□□ 1.52
TCF3-219ENST00000610756 UBE3BQ7Z3V4 1068 aa24.57■■□□□ 1.52
TCF3-219ENST00000610756 SMC1BQ8NDV3 1235 aa24.57■■□□□ 1.52
TCF3-219ENST00000610756 WDR90Q96KV7 1748 aa24.57■■□□□ 1.52
TCF3-219ENST00000610756 KIAA2012Q0VF49 1180 aa24.56■■□□□ 1.52
TCF3-219ENST00000610756 NIM1KQ8IY84 436 aa24.56■■□□□ 1.52
TCF3-219ENST00000610756 PLA2G12BQ9BX93 195 aa24.56■■□□□ 1.52
TCF3-219ENST00000610756 NSFL1CQ9UNZ2 370 aaKnown RBP24.56■■□□□ 1.52
TCF3-219ENST00000610756 CEP350Q5VT06 3117 aa24.55■■□□□ 1.52
TCF3-219ENST00000610756 CASP7P55210 303 aa24.55■■□□□ 1.52
TCF3-219ENST00000610756 CCDC85AQ96PX6 553 aaPredicted RBP24.54■■□□□ 1.52
TCF3-219ENST00000610756 ZNRF3Q9ULT6 936 aa24.54■■□□□ 1.52
TCF3-219ENST00000610756 COL4A5P29400 1685 aa24.53■■□□□ 1.52
TCF3-219ENST00000610756 GPSM2P81274 684 aa24.53■■□□□ 1.52
TCF3-219ENST00000610756 MRPL50Q8N5N7 158 aaKnown RBP24.53■■□□□ 1.52
TCF3-219ENST00000610756 PODXL2Q9NZ53 605 aa24.53■■□□□ 1.52
TCF3-219ENST00000610756 WASHC4Q2M389 1173 aa24.52■■□□□ 1.52
TCF3-219ENST00000610756 ANKRD18AQ8IVF6 992 aa24.52■■□□□ 1.52
TCF3-219ENST00000610756 CDC5LQ99459 802 aaKnown RBP24.52■■□□□ 1.52
TCF3-219ENST00000610756 TAF1DQ9H5J8 278 aaPredicted RBP24.52■■□□□ 1.52
TCF3-219ENST00000610756 POLLQ9UGP5 575 aa24.52■■□□□ 1.52
TCF3-219ENST00000610756 TAF1P21675 1872 aa24.51■■□□□ 1.51
TCF3-219ENST00000610756 RTL9Q8NET4 1388 aa24.51■■□□□ 1.51
TCF3-219ENST00000610756 CSF1RP07333 972 aa24.51■■□□□ 1.51
TCF3-219ENST00000610756 APLP1P51693 650 aa24.51■■□□□ 1.51
TCF3-219ENST00000610756 SSH1Q8WYL5 1049 aa24.51■■□□□ 1.51
TCF3-219ENST00000610756 GREM2Q9H772 168 aa24.51■■□□□ 1.51
TCF3-219ENST00000610756 HACL1Q9UJ83 578 aa24.51■■□□□ 1.51
TCF3-219ENST00000610756 GJA3Q9Y6H8 435 aa24.5■■□□□ 1.51
TCF3-219ENST00000610756 C6orf229H3BNL8 230 aa24.49■■□□□ 1.51
TCF3-219ENST00000610756 ALDH1L1O75891 902 aa24.49■■□□□ 1.51
TCF3-219ENST00000610756 CT47B1P0C2W7 299 aaPredicted RBP24.49■■□□□ 1.51
TCF3-219ENST00000610756 CXCL9Q07325 125 aa24.49■■□□□ 1.51
TCF3-219ENST00000610756 ALDH1L2Q3SY69 923 aa24.49■■□□□ 1.51
TCF3-219ENST00000610756 TBC1D16Q8TBP0 767 aa24.49■■□□□ 1.51
TCF3-219ENST00000610756 BSDC1Q9NW68 430 aaPredicted RBP24.49■■□□□ 1.51
TCF3-219ENST00000610756 EYA3Q99504 573 aa24.48■■□□□ 1.51
TCF3-219ENST00000610756 ANKIB1Q9P2G1 1089 aa24.48■■□□□ 1.51
TCF3-219ENST00000610756 COL4A1P02462 1669 aa24.48■■□□□ 1.51
TCF3-219ENST00000610756 PTPRCP08575 1304 aa24.47■■□□□ 1.51
TCF3-219ENST00000610756 EPHX2P34913 555 aa24.47■■□□□ 1.51
TCF3-219ENST00000610756 SLC4A10Q6U841 1118 aa24.47■■□□□ 1.51
TCF3-219ENST00000610756 PNMA8AQ86V59 439 aaPredicted RBP24.47■■□□□ 1.51
TCF3-219ENST00000610756 SRCIN1Q9C0H9 1055 aa24.47■■□□□ 1.51
TCF3-219ENST00000610756 LRRC37AA6NMS7 1700 aa24.47■■□□□ 1.51
TCF3-219ENST00000610756 GRM8O00222 908 aa24.46■■□□□ 1.51
TCF3-219ENST00000610756 POTEIP0CG38 1075 aa24.46■■□□□ 1.51
TCF3-219ENST00000610756 POTEJP0CG39 1038 aa24.46■■□□□ 1.51
TCF3-219ENST00000610756 CHADLQ6NUI6 762 aa24.46■■□□□ 1.51
TCF3-219ENST00000610756 DUOX1Q9NRD9 1551 aa24.45■■□□□ 1.5
TCF3-219ENST00000610756 SCNN1DP51172 638 aa24.45■■□□□ 1.5
TCF3-219ENST00000610756 FOXO4P98177 505 aa24.45■■□□□ 1.5
TCF3-219ENST00000610756 TNIP1Q15025 636 aa24.45■■□□□ 1.5
TCF3-219ENST00000610756 CIAPIN1Q6FI81 312 aa24.45■■□□□ 1.5
TCF3-219ENST00000610756 LDHDQ86WU2 507 aa24.45■■□□□ 1.5
TCF3-219ENST00000610756 ZC3H12CQ9C0D7 883 aaKnown RBP24.45■■□□□ 1.5
TCF3-219ENST00000610756 C9orf78Q9NZ63 289 aaPredicted RBP24.45■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms