RNA–Protein interactions for RNA: ENST00000610468.4

MUC1-222, Transcript of mucin 1, cell surface associated, human

TSL 1 (best)

Gene MUC1, Length 1,162 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MUC1-222	ENST00000610468	ADAMTS8	Q9UP79	889 aa		18.14	■□□□□ 0.49
MUC1-222	ENST00000610468	CDHR2	Q9BYE9	1310 aa		18.14	■□□□□ 0.49
MUC1-222	ENST00000610468	DEFB115	Q30KQ5	88 aa		18.13	■□□□□ 0.49
MUC1-222	ENST00000610468	MPND	Q8N594	471 aa		18.13	■□□□□ 0.49
MUC1-222	ENST00000610468	CFAP44	Q96MT7	982 aa		18.13	■□□□□ 0.49
MUC1-222	ENST00000610468	ISCA1	Q9BUE6	129 aa		18.13	■□□□□ 0.49
MUC1-222	ENST00000610468	ADARB2	Q9NS39	739 aa	Known RBP	18.13	■□□□□ 0.49
MUC1-222	ENST00000610468	CAPN15	O75808	1086 aa		18.12	■□□□□ 0.49
MUC1-222	ENST00000610468	CTCF	P49711	727 aa	Predicted RBP	18.12	■□□□□ 0.49
MUC1-222	ENST00000610468	ANKRD13D	Q6ZTN6	518 aa		18.12	■□□□□ 0.49
MUC1-222	ENST00000610468	LAS1L	Q9Y4W2	734 aa	Known RBP	18.12	■□□□□ 0.49
MUC1-222	ENST00000610468	DUOX1	Q9NRD9	1551 aa		18.12	■□□□□ 0.49
MUC1-222	ENST00000610468	AIDA	Q96BJ3	306 aa		18.11	■□□□□ 0.49
MUC1-222	ENST00000610468	ABT1	Q9ULW3	272 aa	Known RBP	18.11	■□□□□ 0.49
MUC1-222	ENST00000610468	LAMB2	P55268	1798 aa		18.1	■□□□□ 0.49
MUC1-222	ENST00000610468	WDR33	Q9C0J8	1336 aa	Known RBP	18.1	■□□□□ 0.49
MUC1-222	ENST00000610468	ZNF853	P0CG23	659 aa		18.1	■□□□□ 0.49
MUC1-222	ENST00000610468	GMPS	P49915	693 aa	Predicted RBP	18.1	■□□□□ 0.49
MUC1-222	ENST00000610468	TRIM28	Q13263	835 aa	Known RBP	18.1	■□□□□ 0.49
MUC1-222	ENST00000610468	SF3B3	Q15393	1217 aa	Known RBP	18.1	■□□□□ 0.49
MUC1-222	ENST00000610468	DUSP27	Q5VZP5	1158 aa		18.1	■□□□□ 0.49
MUC1-222	ENST00000610468	CST9	Q5W186	159 aa		18.1	■□□□□ 0.49
MUC1-222	ENST00000610468	MBIP	Q9NS73	344 aa		18.1	■□□□□ 0.49
MUC1-222	ENST00000610468	HYPK	Q9NX55	129 aa		18.1	■□□□□ 0.49
MUC1-222	ENST00000610468	PGAP2	Q9UHJ9	254 aa		18.1	■□□□□ 0.49
MUC1-222	ENST00000610468	LRRC37A	A6NMS7	1700 aa		18.09	■□□□□ 0.49
MUC1-222	ENST00000610468	THSD7B	Q9C0I4	1608 aa		18.09	■□□□□ 0.49
MUC1-222	ENST00000610468	TRAF5	O00463	557 aa		18.09	■□□□□ 0.49
MUC1-222	ENST00000610468	FMR1	Q06787	632 aa	Known RBP eCLIP	18.09	■□□□□ 0.49
MUC1-222	ENST00000610468	CIAPIN1	Q6FI81	312 aa		18.09	■□□□□ 0.49
MUC1-222	ENST00000610468	FAM89A	Q96GI7	184 aa		18.09	■□□□□ 0.49
MUC1-222	ENST00000610468	PRKRIP1	Q9H875	184 aa	Predicted RBP	18.09	■□□□□ 0.49
MUC1-222	ENST00000610468	YDJC	A8MPS7	323 aa		18.08	■□□□□ 0.48
MUC1-222	ENST00000610468	TNIP1	Q15025	636 aa		18.08	■□□□□ 0.48
MUC1-222	ENST00000610468	ATP5J2-PTCD1	G3V325	749 aa		18.07	■□□□□ 0.48
MUC1-222	ENST00000610468	MAP2K1	Q02750	393 aa	Predicted RBP	18.07	■□□□□ 0.48
MUC1-222	ENST00000610468	ZC3H15	Q8WU90	426 aa	Known RBP	18.07	■□□□□ 0.48
MUC1-222	ENST00000610468	TLL2	Q9Y6L7	1015 aa		18.07	■□□□□ 0.48
MUC1-222	ENST00000610468	RAD17	O75943	681 aa		18.06	■□□□□ 0.48
MUC1-222	ENST00000610468	CELF1	Q92879	486 aa	Known RBP	18.06	■□□□□ 0.48
MUC1-222	ENST00000610468	CAPNS2	Q96L46	248 aa		18.06	■□□□□ 0.48
MUC1-222	ENST00000610468	IFT57	Q9NWB7	429 aa		18.06	■□□□□ 0.48
MUC1-222	ENST00000610468	DDX60	Q8IY21	1712 aa	Known RBP	18.06	■□□□□ 0.48
MUC1-222	ENST00000610468	HSPA8	P11142	646 aa	Known RBP	18.05	■□□□□ 0.48
MUC1-222	ENST00000610468	ECE1	P42892	770 aa		18.05	■□□□□ 0.48
MUC1-222	ENST00000610468	HIRA	P54198	1017 aa	Predicted RBP	18.05	■□□□□ 0.48
MUC1-222	ENST00000610468	ZNF428	Q96B54	188 aa		18.05	■□□□□ 0.48
MUC1-222	ENST00000610468	COL4A1	P02462	1669 aa		18.04	■□□□□ 0.48
MUC1-222	ENST00000610468	IRS4	O14654	1257 aa	Predicted RBP	18.04	■□□□□ 0.48
MUC1-222	ENST00000610468	LBX1	P52954	281 aa		18.04	■□□□□ 0.48
MUC1-222	ENST00000610468	CALD1	Q05682	793 aa	Known RBP	18.04	■□□□□ 0.48
MUC1-222	ENST00000610468	TRPM4	Q8TD43	1214 aa		18.04	■□□□□ 0.48
MUC1-222	ENST00000610468	BCL2L13	Q9BXK5	485 aa		18.04	■□□□□ 0.48
MUC1-222	ENST00000610468	APAF1	O14727	1248 aa		18.03	■□□□□ 0.48
MUC1-222	ENST00000610468	WASHC4	Q2M389	1173 aa		18.03	■□□□□ 0.48
MUC1-222	ENST00000610468	CYP4F22	Q6NT55	531 aa		18.03	■□□□□ 0.48
MUC1-222	ENST00000610468	SAPCD2	Q86UD0	394 aa		18.03	■□□□□ 0.48
MUC1-222	ENST00000610468	ZBTB38	Q8NAP3	1195 aa	Predicted RBP	18.03	■□□□□ 0.48
MUC1-222	ENST00000610468	DPF2	Q92785	391 aa		18.03	■□□□□ 0.48
MUC1-222	ENST00000610468	HHIPL1	Q96JK4	782 aa		18.03	■□□□□ 0.48
MUC1-222	ENST00000610468	GLIS2	Q9BZE0	524 aa	Predicted RBP	18.03	■□□□□ 0.48
MUC1-222	ENST00000610468	POLL	Q9UGP5	575 aa		18.03	■□□□□ 0.48
MUC1-222	ENST00000610468	NSFL1C	Q9UNZ2	370 aa	Known RBP	18.03	■□□□□ 0.48
MUC1-222	ENST00000610468	GNAI1	P63096	354 aa		18.02	■□□□□ 0.48
MUC1-222	ENST00000610468	GPSM2	P81274	684 aa		18.02	■□□□□ 0.48
MUC1-222	ENST00000610468	GOLGA2	Q08379	1002 aa		18.02	■□□□□ 0.48
MUC1-222	ENST00000610468	GPR101	Q96P66	508 aa	Predicted RBP	18.02	■□□□□ 0.48
MUC1-222	ENST00000610468	CNOT7	Q9UIV1	285 aa	Known RBP	18.02	■□□□□ 0.48
MUC1-222	ENST00000610468	SHTN1	A0MZ66	631 aa		18.01	■□□□□ 0.47
MUC1-222	ENST00000610468	CELF2	O95319	508 aa	Known RBP	18.01	■□□□□ 0.47
MUC1-222	ENST00000610468	RPS8	P62241	208 aa	Known RBP	18.01	■□□□□ 0.47
MUC1-222	ENST00000610468	RTL5	Q5HYW3	569 aa	Predicted RBP	18.01	■□□□□ 0.47
MUC1-222	ENST00000610468	RIC3	Q7Z5B4	369 aa		18.01	■□□□□ 0.47
MUC1-222	ENST00000610468	MICALL2	Q8IY33	904 aa		18.01	■□□□□ 0.47
MUC1-222	ENST00000610468	PHAX	Q9H814	394 aa	Known RBP	18.01	■□□□□ 0.47
MUC1-222	ENST00000610468		H7C1D1	291 aa		18	■□□□□ 0.47
MUC1-222	ENST00000610468	PSMD14	O00487	310 aa		18	■□□□□ 0.47
MUC1-222	ENST00000610468	HSP90B1	P14625	803 aa	Known RBP	18	■□□□□ 0.47
MUC1-222	ENST00000610468	RPS12	P25398	132 aa	Known RBP	18	■□□□□ 0.47
MUC1-222	ENST00000610468	MAP2K2	P36507	400 aa		18	■□□□□ 0.47
MUC1-222	ENST00000610468	CDC37L1	Q7L3B6	337 aa		18	■□□□□ 0.47
MUC1-222	ENST00000610468	CCDC191	Q8NCU4	936 aa		18	■□□□□ 0.47
MUC1-222	ENST00000610468	DBNDD1	Q9H9R9	158 aa		18	■□□□□ 0.47
MUC1-222	ENST00000610468	PODXL2	Q9NZ53	605 aa		18	■□□□□ 0.47
MUC1-222	ENST00000610468	ZBTB12	Q9Y330	459 aa	Predicted RBP	18	■□□□□ 0.47
MUC1-222	ENST00000610468	RTL9	Q8NET4	1388 aa		18	■□□□□ 0.47
MUC1-222	ENST00000610468	ZNF316	A6NFI3	1004 aa	Predicted RBP	17.99	■□□□□ 0.47
MUC1-222	ENST00000610468	C6orf229	H3BNL8	230 aa		17.99	■□□□□ 0.47
MUC1-222	ENST00000610468	PAXIP1	Q6ZW49	1069 aa	Predicted RBP	17.99	■□□□□ 0.47
MUC1-222	ENST00000610468	C8orf58	Q8NAV2	365 aa		17.99	■□□□□ 0.47
MUC1-222	ENST00000610468	TBC1D16	Q8TBP0	767 aa		17.99	■□□□□ 0.47
MUC1-222	ENST00000610468	EYA3	Q99504	573 aa		17.99	■□□□□ 0.47
MUC1-222	ENST00000610468	TAF1	P21675	1872 aa		17.99	■□□□□ 0.47
MUC1-222	ENST00000610468	ELL2	O00472	640 aa	Predicted RBP	17.98	■□□□□ 0.47
MUC1-222	ENST00000610468	ECE2	O60344	883 aa		17.98	■□□□□ 0.47
MUC1-222	ENST00000610468	PCCA	P05165	728 aa	Predicted RBP	17.98	■□□□□ 0.47
MUC1-222	ENST00000610468	TRPM7	Q96QT4	1865 aa		17.98	■□□□□ 0.47
MUC1-222	ENST00000610468	RIMBP2	O15034	1052 aa		17.97	■□□□□ 0.47
MUC1-222	ENST00000610468	MYD88	Q99836	296 aa		17.97	■□□□□ 0.47
MUC1-222	ENST00000610468	BEGAIN	Q9BUH8	593 aa		17.97	■□□□□ 0.47

Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms