RNA–Protein interactions for RNA: ENST00000604609.2

GDF15-205, Transcript of growth differentiation factor 15, humanhuman

TSL 3

Gene GDF15, Length 506 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GDF15-205ENST00000604609 NLRP3Q96P20 1036 aa12.4□□□□□ -0.42
GDF15-205ENST00000604609 PLA2G12BQ9BX93 195 aa12.4□□□□□ -0.42
GDF15-205ENST00000604609 CHMP3Q9Y3E7 222 aa12.4□□□□□ -0.42
GDF15-205ENST00000604609 RIC1Q4ADV7 1423 aa12.39□□□□□ -0.43
GDF15-205ENST00000604609 ANKRD36CQ5JPF3 1778 aa12.39□□□□□ -0.43
GDF15-205ENST00000604609 H0YIN7 160 aa12.39□□□□□ -0.43
GDF15-205ENST00000604609 CSF1RP07333 972 aa12.39□□□□□ -0.43
GDF15-205ENST00000604609 YBX3P16989 372 aaKnown RBP eCLIP12.39□□□□□ -0.43
GDF15-205ENST00000604609 PDE6BP35913 854 aa12.39□□□□□ -0.43
GDF15-205ENST00000604609 RABL6Q3YEC7 729 aaPredicted RBP12.39□□□□□ -0.43
GDF15-205ENST00000604609 ZBTB40Q9NUA8 1239 aa12.39□□□□□ -0.43
GDF15-205ENST00000604609 AFDNP55196 1824 aaKnown RBP12.39□□□□□ -0.43
GDF15-205ENST00000604609 COL11A2P13942 1736 aaPredicted RBP12.38□□□□□ -0.43
GDF15-205ENST00000604609 PNMA6EA0A0J9YXQ4 647 aa12.38□□□□□ -0.43
GDF15-205ENST00000604609 WTIPA6NIX2 430 aaPredicted RBP12.38□□□□□ -0.43
GDF15-205ENST00000604609 CENPBP07199 599 aaPredicted RBP12.38□□□□□ -0.43
GDF15-205ENST00000604609 NPR1P16066 1061 aa12.38□□□□□ -0.43
GDF15-205ENST00000604609 TGFB2P61812 414 aa12.38□□□□□ -0.43
GDF15-205ENST00000604609 RPGRQ92834 1020 aaKnown RBP12.38□□□□□ -0.43
GDF15-205ENST00000604609 PA2G4Q9UQ80 394 aaKnown RBP12.38□□□□□ -0.43
GDF15-205ENST00000604609 ANKRD31Q8N7Z5 1873 aa12.38□□□□□ -0.43
GDF15-205ENST00000604609 KIAA1551Q9HCM1 1747 aa12.37□□□□□ -0.43
GDF15-205ENST00000604609 GNAI2P04899 355 aa12.37□□□□□ -0.43
GDF15-205ENST00000604609 GNAI3P08754 354 aa12.37□□□□□ -0.43
GDF15-205ENST00000604609 ITGA6P23229 1130 aa12.37□□□□□ -0.43
GDF15-205ENST00000604609 HOXA10P31260 410 aaPredicted RBP12.37□□□□□ -0.43
GDF15-205ENST00000604609 RFX5P48382 616 aaPredicted RBP12.37□□□□□ -0.43
GDF15-205ENST00000604609 PRPF40BQ6NWY9 871 aaKnown RBP12.37□□□□□ -0.43
GDF15-205ENST00000604609 SIRT2Q8IXJ6 389 aa12.37□□□□□ -0.43
GDF15-205ENST00000604609 PELP1Q8IZL8 1130 aaKnown RBP12.37□□□□□ -0.43
GDF15-205ENST00000604609 MASTLQ96GX5 879 aa12.37□□□□□ -0.43
GDF15-205ENST00000604609 PUS3Q9BZE2 481 aaKnown RBP12.37□□□□□ -0.43
GDF15-205ENST00000604609 DDX19BQ9UMR2 479 aa12.37□□□□□ -0.43
GDF15-205ENST00000604609 BCS1LQ9Y276 419 aa12.37□□□□□ -0.43
GDF15-205ENST00000604609 PCDHB15Q9Y5E8 787 aa12.37□□□□□ -0.43
GDF15-205ENST00000604609 MS4A1P11836 297 aa12.36□□□□□ -0.43
GDF15-205ENST00000604609 CCDC152Q4G0S7 254 aa12.36□□□□□ -0.43
GDF15-205ENST00000604609 STYK1Q6J9G0 422 aa12.36□□□□□ -0.43
GDF15-205ENST00000604609 CEP85Q6P2H3 762 aa12.36□□□□□ -0.43
GDF15-205ENST00000604609 DDX60Q8IY21 1712 aaKnown RBP12.36□□□□□ -0.43
GDF15-205ENST00000604609 SNAP23O00161 211 aa12.35□□□□□ -0.43
GDF15-205ENST00000604609 C21orf2O43822 256 aa12.35□□□□□ -0.43
GDF15-205ENST00000604609 GRAPQ13588 217 aa12.35□□□□□ -0.43
GDF15-205ENST00000604609 LRRC24Q50LG9 513 aa12.35□□□□□ -0.43
GDF15-205ENST00000604609 DDX46Q7L014 1031 aaKnown RBP12.35□□□□□ -0.43
GDF15-205ENST00000604609 GRAPLQ8TC17 118 aaPredicted RBP12.35□□□□□ -0.43
GDF15-205ENST00000604609 C7orf43Q8WVR3 580 aa12.35□□□□□ -0.43
GDF15-205ENST00000604609 RBM17Q96I25 401 aaKnown RBP12.35□□□□□ -0.43
GDF15-205ENST00000604609 GPR101Q96P66 508 aaPredicted RBP12.35□□□□□ -0.43
GDF15-205ENST00000604609 PIM2Q9P1W9 311 aa12.35□□□□□ -0.43
GDF15-205ENST00000604609 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP12.35□□□□□ -0.43
GDF15-205ENST00000604609 PPEF1O14829 653 aaPredicted RBP12.34□□□□□ -0.43
GDF15-205ENST00000604609 SRGAP3O43295 1099 aa12.34□□□□□ -0.43
GDF15-205ENST00000604609 DALRD3Q5D0E6 543 aaKnown RBP12.34□□□□□ -0.43
GDF15-205ENST00000604609 TTLL6Q8N841 843 aa12.34□□□□□ -0.43
GDF15-205ENST00000604609 CRAMP1Q96RY5 1269 aa12.34□□□□□ -0.43
GDF15-205ENST00000604609 SIL1Q9H173 461 aa12.34□□□□□ -0.43
GDF15-205ENST00000604609 RTL9Q8NET4 1388 aa12.33□□□□□ -0.44
GDF15-205ENST00000604609 PRELPP51888 382 aa12.33□□□□□ -0.44
GDF15-205ENST00000604609 RPS8P62241 208 aaKnown RBP12.33□□□□□ -0.44
GDF15-205ENST00000604609 PTPN12Q05209 780 aaKnown RBP12.33□□□□□ -0.44
GDF15-205ENST00000604609 IFIT5Q13325 482 aaKnown RBP12.33□□□□□ -0.44
GDF15-205ENST00000604609 HELBQ8NG08 1087 aaPredicted RBP12.33□□□□□ -0.44
GDF15-205ENST00000604609 CNKSR1Q969H4 720 aa12.33□□□□□ -0.44
GDF15-205ENST00000604609 GOLGB1Q14789 3259 aaKnown RBP12.33□□□□□ -0.44
GDF15-205ENST00000604609 ANKRD18BA2A2Z9 1011 aa12.32□□□□□ -0.44
GDF15-205ENST00000604609 GPSM2P81274 684 aa12.32□□□□□ -0.44
GDF15-205ENST00000604609 ATP8B2P98198 1209 aa12.32□□□□□ -0.44
GDF15-205ENST00000604609 RASSF7Q02833 373 aa12.32□□□□□ -0.44
GDF15-205ENST00000604609 MTX1Q13505 466 aa12.32□□□□□ -0.44
GDF15-205ENST00000604609 POLA2Q14181 598 aa12.32□□□□□ -0.44
GDF15-205ENST00000604609 CCDC57Q2TAC2 916 aa12.32□□□□□ -0.44
GDF15-205ENST00000604609 N4BP2Q86UW6 1770 aaPredicted RBP12.32□□□□□ -0.44
GDF15-205ENST00000604609 SNED1Q8TER0 1413 aa12.31□□□□□ -0.44
GDF15-205ENST00000604609 TAF5LO75529 589 aa12.31□□□□□ -0.44
GDF15-205ENST00000604609 KLRK1P26718 216 aa12.31□□□□□ -0.44
GDF15-205ENST00000604609 ATG9AQ7Z3C6 839 aa12.31□□□□□ -0.44
GDF15-205ENST00000604609 ANKRD18AQ8IVF6 992 aa12.31□□□□□ -0.44
GDF15-205ENST00000604609 ATP6V0A2Q9Y487 856 aa12.31□□□□□ -0.44
GDF15-205ENST00000604609 KIF13BQ9NQT8 1826 aa12.3□□□□□ -0.44
GDF15-205ENST00000604609 NFKBIEO00221 500 aa12.3□□□□□ -0.44
GDF15-205ENST00000604609 HSP90B1P14625 803 aaKnown RBP12.3□□□□□ -0.44
GDF15-205ENST00000604609 ALDH1B1P30837 517 aa12.3□□□□□ -0.44
GDF15-205ENST00000604609 GPR162Q16538 588 aa12.3□□□□□ -0.44
GDF15-205ENST00000604609 TAF7LQ5H9L4 462 aa12.3□□□□□ -0.44
GDF15-205ENST00000604609 SSH3Q8TE77 659 aa12.3□□□□□ -0.44
GDF15-205ENST00000604609 CDC5LQ99459 802 aaKnown RBP12.3□□□□□ -0.44
GDF15-205ENST00000604609 MINPP1Q9UNW1 487 aa12.3□□□□□ -0.44
GDF15-205ENST00000604609 EXOC6BQ9Y2D4 811 aa12.3□□□□□ -0.44
GDF15-205ENST00000604609 CACNA1FO60840 1977 aa12.29□□□□□ -0.44
GDF15-205ENST00000604609 LAMB2P55268 1798 aa12.29□□□□□ -0.44
GDF15-205ENST00000604609 BBOX1O75936 387 aa12.29□□□□□ -0.44
GDF15-205ENST00000604609 IGHMBP2P38935 993 aaKnown RBP12.29□□□□□ -0.44
GDF15-205ENST00000604609 CHRNDQ07001 517 aa12.29□□□□□ -0.44
GDF15-205ENST00000604609 LDHAL6AQ6ZMR3 332 aa12.29□□□□□ -0.44
GDF15-205ENST00000604609 PDZRN3Q9UPQ7 1066 aa12.29□□□□□ -0.44
GDF15-205ENST00000604609 RIPOR2Q9Y4F9 1068 aa12.29□□□□□ -0.44
GDF15-205ENST00000604609 EYA2O00167 538 aa12.28□□□□□ -0.44
GDF15-205ENST00000604609 APBB1O00213 710 aa12.28□□□□□ -0.44
GDF15-205ENST00000604609 IGHDP01880 384 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms