RNA–Protein interactions for RNA: ENST00000603840.5

ZSWIM8-218, Transcript of zinc finger SWIM-type containing 8, humanhuman

TSL 1 (best)

Gene ZSWIM8, Length 970 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZSWIM8-218ENST00000603840 ELL2O00472 640 aaPredicted RBP12.72□□□□□ -0.37
ZSWIM8-218ENST00000603840 GPTP24298 496 aa12.72□□□□□ -0.37
ZSWIM8-218ENST00000603840 MAP2K1Q02750 393 aaPredicted RBP12.72□□□□□ -0.37
ZSWIM8-218ENST00000603840 CRY2Q49AN0 593 aa12.72□□□□□ -0.37
ZSWIM8-218ENST00000603840 SUSD4Q5VX71 490 aa12.72□□□□□ -0.37
ZSWIM8-218ENST00000603840 FAM9BQ8IZU0 186 aa12.72□□□□□ -0.37
ZSWIM8-218ENST00000603840 CAPNS2Q96L46 248 aa12.72□□□□□ -0.37
ZSWIM8-218ENST00000603840 TSKSQ9UJT2 592 aa12.72□□□□□ -0.37
ZSWIM8-218ENST00000603840 ABT1Q9ULW3 272 aaKnown RBP12.72□□□□□ -0.37
ZSWIM8-218ENST00000603840 TNRC18O15417 2968 aaPredicted RBP12.72□□□□□ -0.37
ZSWIM8-218ENST00000603840 AOC2O75106 756 aa12.71□□□□□ -0.37
ZSWIM8-218ENST00000603840 GTF2E1P29083 439 aaPredicted RBP12.71□□□□□ -0.37
ZSWIM8-218ENST00000603840 NUTM1Q86Y26 1132 aa12.71□□□□□ -0.37
ZSWIM8-218ENST00000603840 PSMD1Q99460 953 aa12.71□□□□□ -0.37
ZSWIM8-218ENST00000603840 NYXQ9GZU5 481 aa12.71□□□□□ -0.37
ZSWIM8-218ENST00000603840 IL16Q14005 1332 aa12.7□□□□□ -0.38
ZSWIM8-218ENST00000603840 CCDC85CA6NKD9 419 aa12.7□□□□□ -0.38
ZSWIM8-218ENST00000603840 NTSR2O95665 410 aa12.7□□□□□ -0.38
ZSWIM8-218ENST00000603840 PARP10Q53GL7 1025 aa12.7□□□□□ -0.38
ZSWIM8-218ENST00000603840 C3orf67Q6ZVT6 689 aa12.7□□□□□ -0.38
ZSWIM8-218ENST00000603840 TSPYL6Q8N831 410 aa12.7□□□□□ -0.38
ZSWIM8-218ENST00000603840 TSR2Q969E8 191 aaKnown RBP12.7□□□□□ -0.38
ZSWIM8-218ENST00000603840 GPR101Q96P66 508 aaPredicted RBP12.7□□□□□ -0.38
ZSWIM8-218ENST00000603840 HYPKQ9NX55 129 aa12.7□□□□□ -0.38
ZSWIM8-218ENST00000603840 GJA3Q9Y6H8 435 aa12.7□□□□□ -0.38
ZSWIM8-218ENST00000603840 TCIRG1Q13488 830 aa12.69□□□□□ -0.38
ZSWIM8-218ENST00000603840 ANKRD13DQ6ZTN6 518 aa12.69□□□□□ -0.38
ZSWIM8-218ENST00000603840 PPP1R42Q7Z4L9 355 aa12.69□□□□□ -0.38
ZSWIM8-218ENST00000603840 WDR63Q8IWG1 891 aa12.69□□□□□ -0.38
ZSWIM8-218ENST00000603840 PLBD2Q8NHP8 589 aa12.69□□□□□ -0.38
ZSWIM8-218ENST00000603840 ZBTB12Q9Y330 459 aaPredicted RBP12.69□□□□□ -0.38
ZSWIM8-218ENST00000603840 SALL2Q9Y467 1007 aaPredicted RBP12.69□□□□□ -0.38
ZSWIM8-218ENST00000603840 IBTKQ9P2D0 1353 aaPredicted RBP12.69□□□□□ -0.38
ZSWIM8-218ENST00000603840 ALDH1B1P30837 517 aa12.68□□□□□ -0.38
ZSWIM8-218ENST00000603840 HOXA10P31260 410 aaPredicted RBP12.68□□□□□ -0.38
ZSWIM8-218ENST00000603840 MLLT1Q03111 559 aaPredicted RBP12.68□□□□□ -0.38
ZSWIM8-218ENST00000603840 GRM1Q13255 1194 aa12.68□□□□□ -0.38
ZSWIM8-218ENST00000603840 HSP90AB3PQ58FF7 597 aa12.68□□□□□ -0.38
ZSWIM8-218ENST00000603840 SLC10A5Q5PT55 438 aa12.68□□□□□ -0.38
ZSWIM8-218ENST00000603840 NLRP10Q86W26 655 aa12.68□□□□□ -0.38
ZSWIM8-218ENST00000603840 PHAXQ9H814 394 aaKnown RBP12.68□□□□□ -0.38
ZSWIM8-218ENST00000603840 TLL2Q9Y6L7 1015 aa12.68□□□□□ -0.38
ZSWIM8-218ENST00000603840 NUP98P52948 1817 aa12.67□□□□□ -0.38
ZSWIM8-218ENST00000603840 JDP2Q8WYK2 163 aa12.67□□□□□ -0.38
ZSWIM8-218ENST00000603840 ZIC5Q96T25 663 aa12.67□□□□□ -0.38
ZSWIM8-218ENST00000603840 UTP14AQ9BVJ6 771 aaKnown RBP12.67□□□□□ -0.38
ZSWIM8-218ENST00000603840 CHMP4AQ9BY43 222 aa12.67□□□□□ -0.38
ZSWIM8-218ENST00000603840 MCOLN1Q9GZU1 580 aa12.67□□□□□ -0.38
ZSWIM8-218ENST00000603840 EIF6P56537 245 aaKnown RBP12.66□□□□□ -0.38
ZSWIM8-218ENST00000603840 CCDC30Q5VVM6 783 aa12.66□□□□□ -0.38
ZSWIM8-218ENST00000603840 ISCA1Q9BUE6 129 aa12.66□□□□□ -0.38
ZSWIM8-218ENST00000603840 CASP8AP2Q9UKL3 1982 aa12.66□□□□□ -0.38
ZSWIM8-218ENST00000603840 RIC1Q4ADV7 1423 aa12.65□□□□□ -0.38
ZSWIM8-218ENST00000603840 TCERG1O14776 1098 aaKnown RBP12.65□□□□□ -0.38
ZSWIM8-218ENST00000603840 HIRAP54198 1017 aaPredicted RBP12.65□□□□□ -0.38
ZSWIM8-218ENST00000603840 TRIM28Q13263 835 aaKnown RBP12.65□□□□□ -0.38
ZSWIM8-218ENST00000603840 PAXIP1Q6ZW49 1069 aaPredicted RBP12.65□□□□□ -0.38
ZSWIM8-218ENST00000603840 USP50Q70EL3 339 aaPredicted RBP12.65□□□□□ -0.38
ZSWIM8-218ENST00000603840 SAPCD2Q86UD0 394 aa12.65□□□□□ -0.38
ZSWIM8-218ENST00000603840 LARGE2Q8N3Y3 721 aa12.65□□□□□ -0.38
ZSWIM8-218ENST00000603840 TRPM7Q96QT4 1865 aa12.64□□□□□ -0.39
ZSWIM8-218ENST00000603840 PDE4DIPQ5VU43 2346 aa12.64□□□□□ -0.39
ZSWIM8-218ENST00000603840 ATP5J2-PTCD1G3V325 749 aa12.64□□□□□ -0.39
ZSWIM8-218ENST00000603840 LMOD1P29536 600 aaPredicted RBP12.64□□□□□ -0.39
ZSWIM8-218ENST00000603840 MAP2K2P36507 400 aa12.64□□□□□ -0.39
ZSWIM8-218ENST00000603840 ECE1P42892 770 aa12.64□□□□□ -0.39
ZSWIM8-218ENST00000603840 CXCL9Q07325 125 aa12.64□□□□□ -0.39
ZSWIM8-218ENST00000603840 TWISTNBQ3B726 338 aaPredicted RBP12.64□□□□□ -0.39
ZSWIM8-218ENST00000603840 CC2D2BQ6DHV5 1058 aa12.64□□□□□ -0.39
ZSWIM8-218ENST00000603840 DLK2Q6UY11 383 aa12.64□□□□□ -0.39
ZSWIM8-218ENST00000603840 RIC3Q7Z5B4 369 aa12.64□□□□□ -0.39
ZSWIM8-218ENST00000603840 NLRP3Q96P20 1036 aa12.64□□□□□ -0.39
ZSWIM8-218ENST00000603840 GLIS2Q9BZE0 524 aaPredicted RBP12.64□□□□□ -0.39
ZSWIM8-218ENST00000603840 GPRC5DQ9NZD1 345 aa12.64□□□□□ -0.39
ZSWIM8-218ENST00000603840 TRMT112Q9UI30 125 aaKnown RBP12.64□□□□□ -0.39
ZSWIM8-218ENST00000603840 FANCIQ9NVI1 1328 aa12.63□□□□□ -0.39
ZSWIM8-218ENST00000603840 SHTN1A0MZ66 631 aa12.63□□□□□ -0.39
ZSWIM8-218ENST00000603840 VAMP4O75379 141 aa12.63□□□□□ -0.39
ZSWIM8-218ENST00000603840 HCLS1P14317 486 aaPredicted RBP12.63□□□□□ -0.39
ZSWIM8-218ENST00000603840 GOLGA2Q08379 1002 aa12.63□□□□□ -0.39
ZSWIM8-218ENST00000603840 ZNF428Q96B54 188 aa12.63□□□□□ -0.39
ZSWIM8-218ENST00000603840 CRAMP1Q96RY5 1269 aa12.63□□□□□ -0.39
ZSWIM8-218ENST00000603840 PGAP2Q9UHJ9 254 aa12.63□□□□□ -0.39
ZSWIM8-218ENST00000603840 ZNF521Q96K83 1311 aa12.62□□□□□ -0.39
ZSWIM8-218ENST00000603840 CELF2O95319 508 aaKnown RBP12.62□□□□□ -0.39
ZSWIM8-218ENST00000603840 EXOSC9Q06265 439 aaKnown RBP12.62□□□□□ -0.39
ZSWIM8-218ENST00000603840 AOC3Q16853 763 aa12.62□□□□□ -0.39
ZSWIM8-218ENST00000603840 RPGRQ92834 1020 aaKnown RBP12.62□□□□□ -0.39
ZSWIM8-218ENST00000603840 RBM17Q96I25 401 aaKnown RBP12.62□□□□□ -0.39
ZSWIM8-218ENST00000603840 ADARB2Q9NS39 739 aaKnown RBP12.62□□□□□ -0.39
ZSWIM8-218ENST00000603840 SH3TC1Q8TE82 1336 aa12.62□□□□□ -0.39
ZSWIM8-218ENST00000603840 CCER2I3L3R5 266 aa12.61□□□□□ -0.39
ZSWIM8-218ENST00000603840 PPEF1O14829 653 aaPredicted RBP12.61□□□□□ -0.39
ZSWIM8-218ENST00000603840 PPIP5K2O43314 1243 aa12.61□□□□□ -0.39
ZSWIM8-218ENST00000603840 GMPSP49915 693 aaPredicted RBP12.61□□□□□ -0.39
ZSWIM8-218ENST00000603840 CIAPIN1Q6FI81 312 aa12.61□□□□□ -0.39
ZSWIM8-218ENST00000603840 G2E3Q7L622 706 aa12.61□□□□□ -0.39
ZSWIM8-218ENST00000603840 NIM1KQ8IY84 436 aa12.61□□□□□ -0.39
ZSWIM8-218ENST00000603840 TRPM4Q8TD43 1214 aa12.61□□□□□ -0.39
ZSWIM8-218ENST00000603840 FAM89AQ96GI7 184 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms