RNA–Protein interactions for RNA: ENST00000603043.1

CDCA3-211, Transcript of cell division cycle associated 3, humanhuman

TSL 2

Gene CDCA3, Length 1,995 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-211ENST00000603043 DZIP1LQ8IYY4 767 aaKnown RBP19.63■□□□□ 0.73
CDCA3-211ENST00000603043 UTYO14607 1347 aa19.63■□□□□ 0.73
CDCA3-211ENST00000603043 ALDH1B1P30837 517 aa19.63■□□□□ 0.73
CDCA3-211ENST00000603043 PRPF40BQ6NWY9 871 aaKnown RBP19.63■□□□□ 0.73
CDCA3-211ENST00000603043 PLA2G12BQ9BX93 195 aa19.63■□□□□ 0.73
CDCA3-211ENST00000603043 USP44Q9H0E7 712 aa19.63■□□□□ 0.73
CDCA3-211ENST00000603043 CTSWP56202 376 aa19.62■□□□□ 0.73
CDCA3-211ENST00000603043 CCDC152Q4G0S7 254 aa19.61■□□□□ 0.73
CDCA3-211ENST00000603043 DDX46Q7L014 1031 aaKnown RBP19.61■□□□□ 0.73
CDCA3-211ENST00000603043 TMEM57Q8N5G2 664 aa19.61■□□□□ 0.73
CDCA3-211ENST00000603043 CRAMP1Q96RY5 1269 aa19.61■□□□□ 0.73
CDCA3-211ENST00000603043 PLIN1O60240 522 aa19.61■□□□□ 0.73
CDCA3-211ENST00000603043 RLBP1P12271 317 aa19.61■□□□□ 0.73
CDCA3-211ENST00000603043 GOLGA6L2Q8N9W4 650 aaPredicted RBP19.6■□□□□ 0.73
CDCA3-211ENST00000603043 TTLL11Q8NHH1 800 aa19.6■□□□□ 0.73
CDCA3-211ENST00000603043 CCDC85AQ96PX6 553 aaPredicted RBP19.6■□□□□ 0.73
CDCA3-211ENST00000603043 MS4A1P11836 297 aa19.59■□□□□ 0.73
CDCA3-211ENST00000603043 SUCLG2Q96I99 432 aa19.59■□□□□ 0.73
CDCA3-211ENST00000603043 GRIN3BO60391 1043 aa19.58■□□□□ 0.73
CDCA3-211ENST00000603043 FOXO4P98177 505 aa19.58■□□□□ 0.73
CDCA3-211ENST00000603043 GRAPQ13588 217 aa19.58■□□□□ 0.73
CDCA3-211ENST00000603043 GRAPLQ8TC17 118 aaPredicted RBP19.58■□□□□ 0.73
CDCA3-211ENST00000603043 PANK1Q8TE04 598 aa19.58■□□□□ 0.73
CDCA3-211ENST00000603043 ZNF219Q9P2Y4 722 aaPredicted RBP19.58■□□□□ 0.73
CDCA3-211ENST00000603043 C21orf2O43822 256 aa19.57■□□□□ 0.72
CDCA3-211ENST00000603043 UBTFL1P0CB47 393 aaPredicted RBP19.57■□□□□ 0.72
CDCA3-211ENST00000603043 ITPRIPQ8IWB1 547 aa19.57■□□□□ 0.72
CDCA3-211ENST00000603043 MEIS3Q99687 375 aa19.57■□□□□ 0.72
CDCA3-211ENST00000603043 GREM2Q9H772 168 aa19.57■□□□□ 0.72
CDCA3-211ENST00000603043 SPEF2Q9C093 1822 aa19.57■□□□□ 0.72
CDCA3-211ENST00000603043 COL4A1P02462 1669 aa19.57■□□□□ 0.72
CDCA3-211ENST00000603043 PPEF1O14829 653 aaPredicted RBP19.57■□□□□ 0.72
CDCA3-211ENST00000603043 CSF1RP07333 972 aa19.57■□□□□ 0.72
CDCA3-211ENST00000603043 EPHA10Q5JZY3 1008 aa19.57■□□□□ 0.72
CDCA3-211ENST00000603043 KAZALD1Q96I82 304 aa19.57■□□□□ 0.72
CDCA3-211ENST00000603043 RTL9Q8NET4 1388 aa19.56■□□□□ 0.72
CDCA3-211ENST00000603043 SEC31BQ9NQW1 1179 aa19.56■□□□□ 0.72
CDCA3-211ENST00000603043 GNAI3P08754 354 aa19.55■□□□□ 0.72
CDCA3-211ENST00000603043 FAM161AQ3B820 660 aa19.55■□□□□ 0.72
CDCA3-211ENST00000603043 LMBR1LQ6UX01 489 aa19.55■□□□□ 0.72
CDCA3-211ENST00000603043 C7orf43Q8WVR3 580 aa19.55■□□□□ 0.72
CDCA3-211ENST00000603043 CELF1Q92879 486 aaKnown RBP19.55■□□□□ 0.72
CDCA3-211ENST00000603043 FER1L6Q2WGJ9 1857 aa19.55■□□□□ 0.72
CDCA3-211ENST00000603043 BBOX1O75936 387 aa19.55■□□□□ 0.72
CDCA3-211ENST00000603043 BICC1Q9H694 974 aaKnown RBP19.55■□□□□ 0.72
CDCA3-211ENST00000603043 HDAC5Q9UQL6 1122 aa19.55■□□□□ 0.72
CDCA3-211ENST00000603043 CHMP3Q9Y3E7 222 aa19.55■□□□□ 0.72
CDCA3-211ENST00000603043 SOGA3Q5TF21 947 aa19.54■□□□□ 0.72
CDCA3-211ENST00000603043 LRRC37AA6NMS7 1700 aa19.53■□□□□ 0.72
CDCA3-211ENST00000603043 ITGA6P23229 1130 aa19.53■□□□□ 0.72
CDCA3-211ENST00000603043 RPS8P62241 208 aaKnown RBP19.53■□□□□ 0.72
CDCA3-211ENST00000603043 ARHGAP27Q6ZUM4 889 aa19.53■□□□□ 0.72
CDCA3-211ENST00000603043 CDC5LQ99459 802 aaKnown RBP19.53■□□□□ 0.72
CDCA3-211ENST00000603043 CHD4Q14839 1912 aa19.53■□□□□ 0.72
CDCA3-211ENST00000603043 RRP1P56182 461 aaKnown RBP19.53■□□□□ 0.72
CDCA3-211ENST00000603043 PDE3AQ14432 1141 aa19.53■□□□□ 0.72
CDCA3-211ENST00000603043 RABL6Q3YEC7 729 aaPredicted RBP19.53■□□□□ 0.72
CDCA3-211ENST00000603043 OLFM4Q6UX06 510 aa19.53■□□□□ 0.72
CDCA3-211ENST00000603043 CCDC93Q567U6 631 aa19.52■□□□□ 0.72
CDCA3-211ENST00000603043 C20orf194Q5TEA3 1177 aa19.52■□□□□ 0.72
CDCA3-211ENST00000603043 TMC4Q7Z404 712 aa19.52■□□□□ 0.72
CDCA3-211ENST00000603043 ANKRD18AQ8IVF6 992 aa19.52■□□□□ 0.72
CDCA3-211ENST00000603043 ANKRD44Q8N8A2 993 aa19.52■□□□□ 0.72
CDCA3-211ENST00000603043 TMX4Q9H1E5 349 aaPredicted RBP19.52■□□□□ 0.72
CDCA3-211ENST00000603043 ATP6V0A2Q9Y487 856 aa19.52■□□□□ 0.72
CDCA3-211ENST00000603043 LRRFIP2Q9Y608 721 aaKnown RBP19.52■□□□□ 0.72
CDCA3-211ENST00000603043 IFIT5Q13325 482 aaKnown RBP19.52■□□□□ 0.71
CDCA3-211ENST00000603043 MVPQ14764 893 aaKnown RBP19.52■□□□□ 0.71
CDCA3-211ENST00000603043 COG6Q9Y2V7 657 aa19.52■□□□□ 0.71
CDCA3-211ENST00000603043 ANKRD18BA2A2Z9 1011 aa19.51■□□□□ 0.71
CDCA3-211ENST00000603043 CCDC57Q2TAC2 916 aa19.51■□□□□ 0.71
CDCA3-211ENST00000603043 CC2D2BQ6DHV5 1058 aa19.51■□□□□ 0.71
CDCA3-211ENST00000603043 SLC51AQ86UW1 340 aa19.51■□□□□ 0.71
CDCA3-211ENST00000603043 SBF1O95248 1867 aa19.5■□□□□ 0.71
CDCA3-211ENST00000603043 ZBTB7BO15156 539 aaPredicted RBP19.5■□□□□ 0.71
CDCA3-211ENST00000603043 SP8Q8IXZ3 490 aa19.5■□□□□ 0.71
CDCA3-211ENST00000603043 CCDC88AQ3V6T2 1871 aa19.5■□□□□ 0.71
CDCA3-211ENST00000603043 RTKN2Q8IZC4 609 aa19.5■□□□□ 0.71
CDCA3-211ENST00000603043 GNAI2P04899 355 aa19.49■□□□□ 0.71
CDCA3-211ENST00000603043 IGHMBP2P38935 993 aaKnown RBP19.49■□□□□ 0.71
CDCA3-211ENST00000603043 DDX19BQ9UMR2 479 aa19.49■□□□□ 0.71
CDCA3-211ENST00000603043 SNED1Q8TER0 1413 aa19.49■□□□□ 0.71
CDCA3-211ENST00000603043 NFKBIEO00221 500 aa19.48■□□□□ 0.71
CDCA3-211ENST00000603043 TAOK3Q9H2K8 898 aa19.48■□□□□ 0.71
CDCA3-211ENST00000603043 GRIPAP1Q4V328 841 aa19.48■□□□□ 0.71
CDCA3-211ENST00000603043 TAF7LQ5H9L4 462 aa19.48■□□□□ 0.71
CDCA3-211ENST00000603043 MPHOSPH8Q99549 860 aa19.48■□□□□ 0.71
CDCA3-211ENST00000603043 BSDC1Q9NW68 430 aaPredicted RBP19.48■□□□□ 0.71
CDCA3-211ENST00000603043 RASSF7Q02833 373 aa19.47■□□□□ 0.71
CDCA3-211ENST00000603043 LTBP1Q14766 1721 aa19.46■□□□□ 0.71
CDCA3-211ENST00000603043 LTBP3Q9NS15 1303 aa19.46■□□□□ 0.71
CDCA3-211ENST00000603043 FKBP4Q02790 459 aaKnown RBP eCLIP19.46■□□□□ 0.71
CDCA3-211ENST00000603043 ZNF594Q96JF6 807 aaPredicted RBP19.46■□□□□ 0.71
CDCA3-211ENST00000603043 DPP8Q6V1X1 898 aaPredicted RBP19.45■□□□□ 0.7
CDCA3-211ENST00000603043 MPNDQ8N594 471 aa19.45■□□□□ 0.7
CDCA3-211ENST00000603043 CHMP4BQ9H444 224 aaKnown RBP19.45■□□□□ 0.7
CDCA3-211ENST00000603043 C1orf115Q9H7X2 142 aa19.45■□□□□ 0.7
CDCA3-211ENST00000603043 SUPT16HQ9Y5B9 1047 aaKnown RBP19.45■□□□□ 0.7
CDCA3-211ENST00000603043 PSMD1Q99460 953 aa19.44■□□□□ 0.7
CDCA3-211ENST00000603043 NSFL1CQ9UNZ2 370 aaKnown RBP19.44■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 146.5 ms