RNA–Protein interactions for RNA: ENST00000602955.1

AC004542.1-201, humanhuman

TSL 3 BASIC

Gene AC004542.1, Length 264 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004542.1-201ENST00000602955 CHRDQ9H2X0 955 aa6.33□□□□□ -1.4
AC004542.1-201ENST00000602955 TMEM63CQ9P1W3 806 aa6.33□□□□□ -1.4
AC004542.1-201ENST00000602955 CAPN5O15484 640 aaPredicted RBP6.32□□□□□ -1.4
AC004542.1-201ENST00000602955 XYLBO75191 536 aa6.32□□□□□ -1.4
AC004542.1-201ENST00000602955 GJA8P48165 433 aa6.32□□□□□ -1.4
AC004542.1-201ENST00000602955 PRR20EP86478 221 aa6.32□□□□□ -1.4
AC004542.1-201ENST00000602955 PRR20CP86479 221 aa6.32□□□□□ -1.4
AC004542.1-201ENST00000602955 PRR20DP86480 221 aa6.32□□□□□ -1.4
AC004542.1-201ENST00000602955 PRR20BP86481 221 aa6.32□□□□□ -1.4
AC004542.1-201ENST00000602955 PRR20AP86496 221 aa6.32□□□□□ -1.4
AC004542.1-201ENST00000602955 LYSMD3Q7Z3D4 306 aa6.32□□□□□ -1.4
AC004542.1-201ENST00000602955 PRICKLE2Q7Z3G6 844 aa6.32□□□□□ -1.4
AC004542.1-201ENST00000602955 DHX38Q92620 1227 aaKnown RBP6.32□□□□□ -1.4
AC004542.1-201ENST00000602955 DNAJC2Q99543 621 aaKnown RBP6.32□□□□□ -1.4
AC004542.1-201ENST00000602955 BCO2Q9BYV7 579 aa6.32□□□□□ -1.4
AC004542.1-201ENST00000602955 SUV39H2Q9H5I1 410 aa6.32□□□□□ -1.4
AC004542.1-201ENST00000602955 NPHS2Q9NP85 383 aa6.32□□□□□ -1.4
AC004542.1-201ENST00000602955 TIMMDC1Q9NPL8 285 aa6.32□□□□□ -1.4
AC004542.1-201ENST00000602955 A0A1W2PNR3 127 aa6.31□□□□□ -1.4
AC004542.1-201ENST00000602955 POLR3DP05423 398 aaPredicted RBP6.31□□□□□ -1.4
AC004542.1-201ENST00000602955 BMP2P12643 396 aa6.31□□□□□ -1.4
AC004542.1-201ENST00000602955 DNAJA1P31689 397 aaKnown RBP6.31□□□□□ -1.4
AC004542.1-201ENST00000602955 VEGFBP49765 207 aa6.31□□□□□ -1.4
AC004542.1-201ENST00000602955 RBL2Q08999 1139 aa6.31□□□□□ -1.4
AC004542.1-201ENST00000602955 NXPE4Q6UWF7 544 aa6.31□□□□□ -1.4
AC004542.1-201ENST00000602955 TRIM67Q6ZTA4 783 aa6.31□□□□□ -1.4
AC004542.1-201ENST00000602955 NOP9Q86U38 636 aaKnown RBP6.31□□□□□ -1.4
AC004542.1-201ENST00000602955 PMEPA1Q969W9 287 aa6.31□□□□□ -1.4
AC004542.1-201ENST00000602955 CEP63Q96MT8 703 aa6.31□□□□□ -1.4
AC004542.1-201ENST00000602955 LNPKQ9C0E8 428 aa6.31□□□□□ -1.4
AC004542.1-201ENST00000602955 ABI2Q9NYB9 513 aaPredicted RBP6.31□□□□□ -1.4
AC004542.1-201ENST00000602955 CADPSQ9ULU8 1353 aa6.31□□□□□ -1.4
AC004542.1-201ENST00000602955 GADD45BO75293 160 aaPredicted RBP6.3□□□□□ -1.4
AC004542.1-201ENST00000602955 GTF2F1P35269 517 aaKnown RBP eCLIP6.3□□□□□ -1.4
AC004542.1-201ENST00000602955 GRM2Q14416 872 aa6.3□□□□□ -1.4
AC004542.1-201ENST00000602955 SAMD5Q5TGI4 173 aa6.3□□□□□ -1.4
AC004542.1-201ENST00000602955 KIAA0319Q5VV43 1072 aa6.3□□□□□ -1.4
AC004542.1-201ENST00000602955 NLRP13Q86W25 1043 aa6.3□□□□□ -1.4
AC004542.1-201ENST00000602955 VPS37DQ86XT2 251 aa6.3□□□□□ -1.4
AC004542.1-201ENST00000602955 C1orf127Q8N9H9 656 aa6.3□□□□□ -1.4
AC004542.1-201ENST00000602955 NOC4LQ9BVI4 516 aaKnown RBP6.3□□□□□ -1.4
AC004542.1-201ENST00000602955 CRISPLD1Q9H336 500 aa6.3□□□□□ -1.4
AC004542.1-201ENST00000602955 CNTN3Q9P232 1028 aa6.3□□□□□ -1.4
AC004542.1-201ENST00000602955 EREGO14944 169 aa6.29□□□□□ -1.4
AC004542.1-201ENST00000602955 GSTT1P30711 240 aa6.29□□□□□ -1.4
AC004542.1-201ENST00000602955 KCNQ4P56696 695 aa6.29□□□□□ -1.4
AC004542.1-201ENST00000602955 GIMAP6Q6P9H5 292 aa6.29□□□□□ -1.4
AC004542.1-201ENST00000602955 GJA3Q9Y6H8 435 aa6.29□□□□□ -1.4
AC004542.1-201ENST00000602955 TTLL8A6PVC2 850 aa6.28□□□□□ -1.4
AC004542.1-201ENST00000602955 FGRP09769 529 aa6.28□□□□□ -1.4
AC004542.1-201ENST00000602955 RHOQP17081 205 aa6.28□□□□□ -1.4
AC004542.1-201ENST00000602955 CES1P23141 567 aa6.28□□□□□ -1.4
AC004542.1-201ENST00000602955 SOGA3Q5TF21 947 aa6.28□□□□□ -1.4
AC004542.1-201ENST00000602955 TTC39BQ5VTQ0 682 aaPredicted RBP6.28□□□□□ -1.4
AC004542.1-201ENST00000602955 MRPL14Q6P1L8 145 aaKnown RBP6.28□□□□□ -1.4
AC004542.1-201ENST00000602955 NLRP8Q86W28 1048 aa6.28□□□□□ -1.4
AC004542.1-201ENST00000602955 MCF2L2Q86YR7 1114 aa6.28□□□□□ -1.4
AC004542.1-201ENST00000602955 ANKRD24Q8TF21 1146 aa6.28□□□□□ -1.4
AC004542.1-201ENST00000602955 GPRASP2Q96D09 838 aa6.28□□□□□ -1.4
AC004542.1-201ENST00000602955 HIRIP3Q9BW71 556 aaPredicted RBP6.28□□□□□ -1.4
AC004542.1-201ENST00000602955 COPRSQ9NQ92 184 aa6.28□□□□□ -1.4
AC004542.1-201ENST00000602955 TRAK1Q9UPV9 953 aa6.28□□□□□ -1.4
AC004542.1-201ENST00000602955 EDN3P14138 238 aa6.27□□□□□ -1.41
AC004542.1-201ENST00000602955 PAK2Q13177 524 aa6.27□□□□□ -1.41
AC004542.1-201ENST00000602955 C6orf118Q5T5N4 469 aa6.27□□□□□ -1.41
AC004542.1-201ENST00000602955 C3orf58Q8NDZ4 430 aa6.27□□□□□ -1.41
AC004542.1-201ENST00000602955 GLIS3Q8NEA6 775 aa6.27□□□□□ -1.41
AC004542.1-201ENST00000602955 RASGRP4Q8TDF6 673 aa6.27□□□□□ -1.41
AC004542.1-201ENST00000602955 RSRP1Q9BUV0 290 aa6.27□□□□□ -1.41
AC004542.1-201ENST00000602955 BRD7Q9NPI1 651 aa6.27□□□□□ -1.41
AC004542.1-201ENST00000602955 PPP4R2Q9NY27 417 aa6.27□□□□□ -1.41
AC004542.1-201ENST00000602955 DYRK1BQ9Y463 629 aa6.27□□□□□ -1.41
AC004542.1-201ENST00000602955 A0A1W2PP55 124 aa6.26□□□□□ -1.41
AC004542.1-201ENST00000602955 F11P03951 625 aa6.26□□□□□ -1.41
AC004542.1-201ENST00000602955 ATF4P18848 351 aaPredicted RBP6.26□□□□□ -1.41
AC004542.1-201ENST00000602955 CCDC144BQ3MJ40 725 aa6.26□□□□□ -1.41
AC004542.1-201ENST00000602955 PRPF40BQ6NWY9 871 aaKnown RBP6.26□□□□□ -1.41
AC004542.1-201ENST00000602955 ZCCHC2Q9C0B9 1178 aaKnown RBP6.26□□□□□ -1.41
AC004542.1-201ENST00000602955 RUBCNLQ9H714 662 aa6.26□□□□□ -1.41
AC004542.1-201ENST00000602955 KBTBD4Q9NVX7 518 aa6.26□□□□□ -1.41
AC004542.1-201ENST00000602955 PPM1HQ9ULR3 514 aa6.26□□□□□ -1.41
AC004542.1-201ENST00000602955 SOS2Q07890 1332 aaPredicted RBP6.25□□□□□ -1.41
AC004542.1-201ENST00000602955 FAM157BP0CG42 384 aa6.25□□□□□ -1.41
AC004542.1-201ENST00000602955 XRCC5P13010 732 aaKnown RBP6.25□□□□□ -1.41
AC004542.1-201ENST00000602955 PWP1Q13610 501 aa6.25□□□□□ -1.41
AC004542.1-201ENST00000602955 SCARF1Q14162 830 aa6.25□□□□□ -1.41
AC004542.1-201ENST00000602955 LBRQ14739 615 aaKnown RBP6.25□□□□□ -1.41
AC004542.1-201ENST00000602955 PEAR1Q5VY43 1037 aaPredicted RBP6.25□□□□□ -1.41
AC004542.1-201ENST00000602955 PGBD3Q8N328 593 aa6.25□□□□□ -1.41
AC004542.1-201ENST00000602955 OR13H1Q8NG92 308 aa6.25□□□□□ -1.41
AC004542.1-201ENST00000602955 BUD13Q9BRD0 619 aaKnown RBP eCLIP6.25□□□□□ -1.41
AC004542.1-201ENST00000602955 EHD4Q9H223 541 aa6.25□□□□□ -1.41
AC004542.1-201ENST00000602955 GPAMQ9HCL2 828 aa6.25□□□□□ -1.41
AC004542.1-201ENST00000602955 LATS2Q9NRM7 1088 aa6.25□□□□□ -1.41
AC004542.1-201ENST00000602955 PLA2G2EQ9NZK7 142 aa6.25□□□□□ -1.41
AC004542.1-201ENST00000602955 TTF2Q9UNY4 1162 aaKnown RBP6.25□□□□□ -1.41
AC004542.1-201ENST00000602955 KCNH4Q9UQ05 1017 aa6.25□□□□□ -1.41
AC004542.1-201ENST00000602955 EFSO43281 561 aa6.24□□□□□ -1.41
AC004542.1-201ENST00000602955 STK10O94804 968 aaKnown RBP6.24□□□□□ -1.41
AC004542.1-201ENST00000602955 MAP3K10Q02779 954 aa6.24□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms