RNA–Protein interactions for RNA: ENST00000600320.5

SHKBP1-222, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 913 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-222ENST00000600320 HSP90B1P14625 803 aaKnown RBP25.13■■□□□ 1.61
SHKBP1-222ENST00000600320 TTLL11Q8NHH1 800 aa25.13■■□□□ 1.61
SHKBP1-222ENST00000600320 MYH3P11055 1940 aa25.12■■□□□ 1.61
SHKBP1-222ENST00000600320 CSF1RP07333 972 aa25.12■■□□□ 1.61
SHKBP1-222ENST00000600320 SRGNP10124 158 aa25.12■■□□□ 1.61
SHKBP1-222ENST00000600320 TGFB2P61812 414 aa25.12■■□□□ 1.61
SHKBP1-222ENST00000600320 ZBTB40Q9NUA8 1239 aa25.12■■□□□ 1.61
SHKBP1-222ENST00000600320 GNAI2P04899 355 aa25.11■■□□□ 1.61
SHKBP1-222ENST00000600320 KCNA3P22001 575 aa25.11■■□□□ 1.61
SHKBP1-222ENST00000600320 RABL6Q3YEC7 729 aaPredicted RBP25.11■■□□□ 1.61
SHKBP1-222ENST00000600320 LMBR1LQ6UX01 489 aa25.11■■□□□ 1.61
SHKBP1-222ENST00000600320 SYT17Q9BSW7 474 aa25.11■■□□□ 1.61
SHKBP1-222ENST00000600320 COL4A1P02462 1669 aa25.1■■□□□ 1.61
SHKBP1-222ENST00000600320 H0YIN7 160 aa25.1■■□□□ 1.61
SHKBP1-222ENST00000600320 FAM161AQ3B820 660 aa25.1■■□□□ 1.61
SHKBP1-222ENST00000600320 EXOC6Q8TAG9 804 aa25.1■■□□□ 1.61
SHKBP1-222ENST00000600320 GREM2Q9H772 168 aa25.1■■□□□ 1.61
SHKBP1-222ENST00000600320 DLEC1Q9Y238 1755 aa25.09■■□□□ 1.61
SHKBP1-222ENST00000600320 SEC31BQ9NQW1 1179 aa25.09■■□□□ 1.61
SHKBP1-222ENST00000600320 PDZRN3Q9UPQ7 1066 aa25.09■■□□□ 1.61
SHKBP1-222ENST00000600320 NPR1P16066 1061 aa25.08■■□□□ 1.61
SHKBP1-222ENST00000600320 CCDC152Q4G0S7 254 aa25.08■■□□□ 1.61
SHKBP1-222ENST00000600320 RPGRQ92834 1020 aaKnown RBP25.08■■□□□ 1.61
SHKBP1-222ENST00000600320 ZNF622Q969S3 477 aaKnown RBP eCLIP25.08■■□□□ 1.61
SHKBP1-222ENST00000600320 MASTLQ96GX5 879 aa25.08■■□□□ 1.61
SHKBP1-222ENST00000600320 HOXA10P31260 410 aaPredicted RBP25.07■■□□□ 1.6
SHKBP1-222ENST00000600320 STYK1Q6J9G0 422 aa25.07■■□□□ 1.6
SHKBP1-222ENST00000600320 HDAC5Q9UQL6 1122 aa25.07■■□□□ 1.6
SHKBP1-222ENST00000600320 CHMP3Q9Y3E7 222 aa25.07■■□□□ 1.6
SHKBP1-222ENST00000600320 TAF1P21675 1872 aa25.06■■□□□ 1.6
SHKBP1-222ENST00000600320 RTL9Q8NET4 1388 aa25.06■■□□□ 1.6
SHKBP1-222ENST00000600320 RBM17Q96I25 401 aaKnown RBP25.06■■□□□ 1.6
SHKBP1-222ENST00000600320 CHMP4BQ9H444 224 aaKnown RBP25.06■■□□□ 1.6
SHKBP1-222ENST00000600320 WWC3Q9ULE0 1092 aa25.06■■□□□ 1.6
SHKBP1-222ENST00000600320 DDX46Q7L014 1031 aaKnown RBP25.05■■□□□ 1.6
SHKBP1-222ENST00000600320 CELF1Q92879 486 aaKnown RBP25.05■■□□□ 1.6
SHKBP1-222ENST00000600320 ITGA6P23229 1130 aa25.04■■□□□ 1.6
SHKBP1-222ENST00000600320 CRAMP1Q96RY5 1269 aa25.04■■□□□ 1.6
SHKBP1-222ENST00000600320 BRCA1P38398 1863 aaKnown RBP25.04■■□□□ 1.6
SHKBP1-222ENST00000600320 MTX1Q13505 466 aa25.03■■□□□ 1.6
SHKBP1-222ENST00000600320 GRAPQ13588 217 aa25.03■■□□□ 1.6
SHKBP1-222ENST00000600320 CEP85Q6P2H3 762 aa25.03■■□□□ 1.6
SHKBP1-222ENST00000600320 SLC51AQ86UW1 340 aa25.03■■□□□ 1.6
SHKBP1-222ENST00000600320 GRAPLQ8TC17 118 aaPredicted RBP25.03■■□□□ 1.6
SHKBP1-222ENST00000600320 PNMA6EA0A0J9YXQ4 647 aa25.02■■□□□ 1.6
SHKBP1-222ENST00000600320 RFX5P48382 616 aaPredicted RBP25.02■■□□□ 1.6
SHKBP1-222ENST00000600320 CACNA1SQ13698 1873 aa25.02■■□□□ 1.6
SHKBP1-222ENST00000600320 ANKRD18BA2A2Z9 1011 aa25.01■■□□□ 1.59
SHKBP1-222ENST00000600320 ATP8B2P98198 1209 aa25.01■■□□□ 1.59
SHKBP1-222ENST00000600320 IFIT5Q13325 482 aaKnown RBP25.01■■□□□ 1.59
SHKBP1-222ENST00000600320 CNKSR1Q969H4 720 aa25.01■■□□□ 1.59
SHKBP1-222ENST00000600320 ZNF594Q96JF6 807 aaPredicted RBP25.01■■□□□ 1.59
SHKBP1-222ENST00000600320 PIM2Q9P1W9 311 aa25.01■■□□□ 1.59
SHKBP1-222ENST00000600320 SLX4Q8IY92 1834 aa25■■□□□ 1.59
SHKBP1-222ENST00000600320 CCDC57Q2TAC2 916 aa25■■□□□ 1.59
SHKBP1-222ENST00000600320 TTLL6Q8N841 843 aa25■■□□□ 1.59
SHKBP1-222ENST00000600320 PCDHB15Q9Y5E8 787 aa25■■□□□ 1.59
SHKBP1-222ENST00000600320 SRGAP3O43295 1099 aa24.99■■□□□ 1.59
SHKBP1-222ENST00000600320 ALDH1B1P30837 517 aa24.99■■□□□ 1.59
SHKBP1-222ENST00000600320 PRPF40BQ6NWY9 871 aaKnown RBP24.99■■□□□ 1.59
SHKBP1-222ENST00000600320 SIRT2Q8IXJ6 389 aa24.99■■□□□ 1.59
SHKBP1-222ENST00000600320 KLHDC4Q8TBB5 520 aa24.99■■□□□ 1.59
SHKBP1-222ENST00000600320 RPS8P62241 208 aaKnown RBP24.98■■□□□ 1.59
SHKBP1-222ENST00000600320 POLA2Q14181 598 aa24.98■■□□□ 1.59
SHKBP1-222ENST00000600320 ANKRD18AQ8IVF6 992 aa24.98■■□□□ 1.59
SHKBP1-222ENST00000600320 CDC5LQ99459 802 aaKnown RBP24.98■■□□□ 1.59
SHKBP1-222ENST00000600320 SPEF2Q9C093 1822 aa24.97■■□□□ 1.59
SHKBP1-222ENST00000600320 PPEF1O14829 653 aaPredicted RBP24.96■■□□□ 1.59
SHKBP1-222ENST00000600320 BBOX1O75936 387 aa24.96■■□□□ 1.59
SHKBP1-222ENST00000600320 PTPN12Q05209 780 aaKnown RBP24.96■■□□□ 1.59
SHKBP1-222ENST00000600320 DALRD3Q5D0E6 543 aaKnown RBP24.96■■□□□ 1.59
SHKBP1-222ENST00000600320 RPAP2Q8IXW5 612 aaPredicted RBP24.96■■□□□ 1.59
SHKBP1-222ENST00000600320 SSH3Q8TE77 659 aa24.96■■□□□ 1.59
SHKBP1-222ENST00000600320 ZNF219Q9P2Y4 722 aaPredicted RBP24.96■■□□□ 1.59
SHKBP1-222ENST00000600320 PA2G4Q9UQ80 394 aaKnown RBP24.96■■□□□ 1.59
SHKBP1-222ENST00000600320 TAF7LQ5H9L4 462 aa24.95■■□□□ 1.58
SHKBP1-222ENST00000600320 OLFM4Q6UX06 510 aa24.95■■□□□ 1.58
SHKBP1-222ENST00000600320 C7orf43Q8WVR3 580 aa24.95■■□□□ 1.58
SHKBP1-222ENST00000600320 PUS3Q9BZE2 481 aaKnown RBP24.95■■□□□ 1.58
SHKBP1-222ENST00000600320 BCS1LQ9Y276 419 aa24.95■■□□□ 1.58
SHKBP1-222ENST00000600320 IGHMBP2P38935 993 aaKnown RBP24.94■■□□□ 1.58
SHKBP1-222ENST00000600320 COPRSQ9NQ92 184 aa24.93■■□□□ 1.58
SHKBP1-222ENST00000600320 C21orf2O43822 256 aa24.92■■□□□ 1.58
SHKBP1-222ENST00000600320 NEFLP07196 543 aa24.92■■□□□ 1.58
SHKBP1-222ENST00000600320 AAMPQ13685 434 aa24.92■■□□□ 1.58
SHKBP1-222ENST00000600320 LRRC24Q50LG9 513 aa24.92■■□□□ 1.58
SHKBP1-222ENST00000600320 BSDC1Q9NW68 430 aaPredicted RBP24.92■■□□□ 1.58
SHKBP1-222ENST00000600320 ATP6V0A2Q9Y487 856 aa24.92■■□□□ 1.58
SHKBP1-222ENST00000600320 YBX3P16989 372 aaKnown RBP eCLIP24.91■■□□□ 1.58
SHKBP1-222ENST00000600320 LDHAL6AQ6ZMR3 332 aa24.91■■□□□ 1.58
SHKBP1-222ENST00000600320 SP8Q8IXZ3 490 aa24.91■■□□□ 1.58
SHKBP1-222ENST00000600320 MPHOSPH8Q99549 860 aa24.91■■□□□ 1.58
SHKBP1-222ENST00000600320 LRRC37AA6NMS7 1700 aa24.91■■□□□ 1.58
SHKBP1-222ENST00000600320 SIL1Q9H173 461 aa24.9■■□□□ 1.58
SHKBP1-222ENST00000600320 ARFGEF1Q9Y6D6 1849 aa24.89■■□□□ 1.58
SHKBP1-222ENST00000600320 SNED1Q8TER0 1413 aa24.89■■□□□ 1.58
SHKBP1-222ENST00000600320 EYA2O00167 538 aa24.89■■□□□ 1.58
SHKBP1-222ENST00000600320 TMC4Q7Z404 712 aa24.89■■□□□ 1.58
SHKBP1-222ENST00000600320 PELP1Q8IZL8 1130 aaKnown RBP24.89■■□□□ 1.58
SHKBP1-222ENST00000600320 CNNM1Q9NRU3 951 aa24.89■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 81.7 ms