RNA–Protein interactions for RNA: ENST00000597304.5

ZNF558-205, Transcript of zinc finger protein 558, humanhuman

TSL 5

Gene ZNF558, Length 2,612 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF558-205ENST00000597304 KDM3BQ7LBC6 1761 aa14.81□□□□□ -0.04
ZNF558-205ENST00000597304 H3BQV1 296 aa14.8□□□□□ -0.04
ZNF558-205ENST00000597304 CTAGE5O15320 804 aa14.8□□□□□ -0.04
ZNF558-205ENST00000597304 ARID5BQ14865 1188 aa14.8□□□□□ -0.04
ZNF558-205ENST00000597304 IFFO2Q5TF58 517 aa14.8□□□□□ -0.04
ZNF558-205ENST00000597304 BRF1Q92994 677 aa14.8□□□□□ -0.04
ZNF558-205ENST00000597304 ZSCAN16Q9H4T2 348 aaPredicted RBP14.8□□□□□ -0.04
ZNF558-205ENST00000597304 MED23Q9ULK4 1368 aa14.8□□□□□ -0.04
ZNF558-205ENST00000597304 CEMIPQ8WUJ3 1361 aa14.8□□□□□ -0.04
ZNF558-205ENST00000597304 BECN2A8MW95 431 aa14.8□□□□□ -0.04
ZNF558-205ENST00000597304 JAK2O60674 1132 aa14.8□□□□□ -0.04
ZNF558-205ENST00000597304 TERF2Q15554 542 aa14.8□□□□□ -0.04
ZNF558-205ENST00000597304 GTF3C6Q969F1 213 aa14.8□□□□□ -0.04
ZNF558-205ENST00000597304 HDAC5Q9UQL6 1122 aa14.8□□□□□ -0.04
ZNF558-205ENST00000597304 TAF6LQ9Y6J9 622 aa14.8□□□□□ -0.04
ZNF558-205ENST00000597304 TMEM2Q9UHN6 1383 aa14.8□□□□□ -0.04
ZNF558-205ENST00000597304 MYH15Q9Y2K3 1946 aa14.8□□□□□ -0.04
ZNF558-205ENST00000597304 CCDC69A6NI79 296 aa14.79□□□□□ -0.04
ZNF558-205ENST00000597304 ANXA1P04083 346 aa14.79□□□□□ -0.04
ZNF558-205ENST00000597304 LTV1Q96GA3 475 aaPredicted RBP14.79□□□□□ -0.04
ZNF558-205ENST00000597304 NOL12Q9UGY1 213 aaKnown RBP eCLIP14.79□□□□□ -0.04
ZNF558-205ENST00000597304 V9GYY5 206 aaPredicted RBP14.79□□□□□ -0.04
ZNF558-205ENST00000597304 MED1Q15648 1581 aaPredicted RBP14.79□□□□□ -0.04
ZNF558-205ENST00000597304 JCADQ9P266 1359 aa14.79□□□□□ -0.04
ZNF558-205ENST00000597304 ALDH1L1O75891 902 aa14.79□□□□□ -0.04
ZNF558-205ENST00000597304 NLRP6P59044 892 aa14.79□□□□□ -0.04
ZNF558-205ENST00000597304 CCZ1BP86790 482 aa14.79□□□□□ -0.04
ZNF558-205ENST00000597304 CCZ1P86791 482 aaPredicted RBP14.79□□□□□ -0.04
ZNF558-205ENST00000597304 ELF2Q15723 593 aa14.79□□□□□ -0.04
ZNF558-205ENST00000597304 TSGA10IPQ3SY00 556 aa14.79□□□□□ -0.04
ZNF558-205ENST00000597304 SLFNL1Q499Z3 407 aa14.79□□□□□ -0.04
ZNF558-205ENST00000597304 FBXO38Q6PIJ6 1188 aa14.79□□□□□ -0.04
ZNF558-205ENST00000597304 FILIP1Q7Z7B0 1213 aa14.79□□□□□ -0.04
ZNF558-205ENST00000597304 CCDC8Q9H0W5 538 aaPredicted RBP14.79□□□□□ -0.04
ZNF558-205ENST00000597304 USP16Q9Y5T5 823 aa14.79□□□□□ -0.04
ZNF558-205ENST00000597304 CCDC66A2RUB6 948 aa14.78□□□□□ -0.04
ZNF558-205ENST00000597304 SLU7O95391 586 aaKnown RBP14.78□□□□□ -0.04
ZNF558-205ENST00000597304 KRT32Q14532 448 aa14.78□□□□□ -0.04
ZNF558-205ENST00000597304 CCAR2Q8N163 923 aaKnown RBP14.78□□□□□ -0.04
ZNF558-205ENST00000597304 EAF2Q96CJ1 260 aaPredicted RBP14.78□□□□□ -0.04
ZNF558-205ENST00000597304 BOLA2Q9H3K6 86 aa14.78□□□□□ -0.04
ZNF558-205ENST00000597304 TRMT1Q9NXH9 659 aaKnown RBP14.78□□□□□ -0.04
ZNF558-205ENST00000597304 RGPD8O14715 1765 aaPredicted RBP14.78□□□□□ -0.04
ZNF558-205ENST00000597304 UBR1Q8IWV7 1749 aa14.78□□□□□ -0.04
ZNF558-205ENST00000597304 KIF2AO00139 706 aaPredicted RBP14.78□□□□□ -0.04
ZNF558-205ENST00000597304 G3BP1Q13283 466 aaKnown RBP eCLIP14.78□□□□□ -0.04
ZNF558-205ENST00000597304 DDX11Q96FC9 970 aa14.78□□□□□ -0.04
ZNF558-205ENST00000597304 MAP3K2Q9Y2U5 619 aa14.78□□□□□ -0.04
ZNF558-205ENST00000597304 SASH1O94885 1247 aa14.77□□□□□ -0.04
ZNF558-205ENST00000597304 HSP90B1P14625 803 aaKnown RBP14.77□□□□□ -0.04
ZNF558-205ENST00000597304 CEBPZQ03701 1054 aaKnown RBP14.77□□□□□ -0.04
ZNF558-205ENST00000597304 ZNF589Q86UQ0 364 aaPredicted RBP14.77□□□□□ -0.04
ZNF558-205ENST00000597304 CCAR1Q8IX12 1150 aaKnown RBP14.77□□□□□ -0.04
ZNF558-205ENST00000597304 FAM53CQ9NYF3 392 aa14.77□□□□□ -0.04
ZNF558-205ENST00000597304 CCDC73Q6ZRK6 1079 aa14.77□□□□□ -0.05
ZNF558-205ENST00000597304 USHBP1Q8N6Y0 703 aa14.77□□□□□ -0.05
ZNF558-205ENST00000597304 ESF1Q9H501 851 aaKnown RBP14.77□□□□□ -0.05
ZNF558-205ENST00000597304 KCND1Q9NSA2 647 aa14.77□□□□□ -0.05
ZNF558-205ENST00000597304 ANO10Q9NW15 660 aa14.77□□□□□ -0.05
ZNF558-205ENST00000597304 GSDMDP57764 484 aa14.76□□□□□ -0.05
ZNF558-205ENST00000597304 DHX40Q8IX18 779 aaKnown RBP14.76□□□□□ -0.05
ZNF558-205ENST00000597304 TLR7Q9NYK1 1049 aaKnown RBP14.76□□□□□ -0.05
ZNF558-205ENST00000597304 DBF4Q9UBU7 674 aaPredicted RBP14.76□□□□□ -0.05
ZNF558-205ENST00000597304 KINO60870 393 aaKnown RBP14.76□□□□□ -0.05
ZNF558-205ENST00000597304 NEK1Q96PY6 1258 aa14.76□□□□□ -0.05
ZNF558-205ENST00000597304 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP14.76□□□□□ -0.05
ZNF558-205ENST00000597304 MARF1Q9Y4F3 1742 aaKnown RBP14.75□□□□□ -0.05
ZNF558-205ENST00000597304 KCNQ3O43525 872 aa14.75□□□□□ -0.05
ZNF558-205ENST00000597304 CEP57L1Q8IYX8 460 aa14.75□□□□□ -0.05
ZNF558-205ENST00000597304 TNRQ92752 1358 aa14.75□□□□□ -0.05
ZNF558-205ENST00000597304 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP14.75□□□□□ -0.05
ZNF558-205ENST00000597304 TAF5LO75529 589 aa14.75□□□□□ -0.05
ZNF558-205ENST00000597304 CWF19L2Q2TBE0 894 aaKnown RBP14.75□□□□□ -0.05
ZNF558-205ENST00000597304 Q6ZUG5 572 aa14.75□□□□□ -0.05
ZNF558-205ENST00000597304 GOLPH3LQ9H4A5 285 aa14.75□□□□□ -0.05
ZNF558-205ENST00000597304 LGR6Q9HBX8 967 aa14.75□□□□□ -0.05
ZNF558-205ENST00000597304 ERBB3P21860 1342 aa14.75□□□□□ -0.05
ZNF558-205ENST00000597304 NUTM2GQ5VZR2 741 aa14.74□□□□□ -0.05
ZNF558-205ENST00000597304 USPL1Q5W0Q7 1092 aa14.74□□□□□ -0.05
ZNF558-205ENST00000597304 KSR2Q6VAB6 950 aa14.74□□□□□ -0.05
ZNF558-205ENST00000597304 RCOR1Q9UKL0 485 aa14.74□□□□□ -0.05
ZNF558-205ENST00000597304 SLIT1O75093 1534 aa14.74□□□□□ -0.05
ZNF558-205ENST00000597304 DIP2AQ14689 1571 aa14.74□□□□□ -0.05
ZNF558-205ENST00000597304 PLEKHG1Q9ULL1 1385 aa14.74□□□□□ -0.05
ZNF558-205ENST00000597304 BTBD11A6QL63 1104 aa14.74□□□□□ -0.05
ZNF558-205ENST00000597304 FAM193AP78312 1265 aa14.74□□□□□ -0.05
ZNF558-205ENST00000597304 TEFQ10587 303 aa14.74□□□□□ -0.05
ZNF558-205ENST00000597304 SNW1Q13573 536 aaKnown RBP14.74□□□□□ -0.05
ZNF558-205ENST00000597304 AOPEPQ8N6M6 819 aa14.74□□□□□ -0.05
ZNF558-205ENST00000597304 SUCLG2Q96I99 432 aa14.74□□□□□ -0.05
ZNF558-205ENST00000597304 NAT10Q9H0A0 1025 aaKnown RBP14.74□□□□□ -0.05
ZNF558-205ENST00000597304 ADD1P35611 737 aaKnown RBP14.73□□□□□ -0.05
ZNF558-205ENST00000597304 BICC1Q9H694 974 aaKnown RBP14.73□□□□□ -0.05
ZNF558-205ENST00000597304 GRM8O00222 908 aa14.73□□□□□ -0.05
ZNF558-205ENST00000597304 FAM160A1Q05DH4 1040 aa14.73□□□□□ -0.05
ZNF558-205ENST00000597304 SCRN1Q12765 414 aa14.73□□□□□ -0.05
ZNF558-205ENST00000597304 NAA16Q6N069 864 aaPredicted RBP14.73□□□□□ -0.05
ZNF558-205ENST00000597304 CREBRFQ8IUR6 639 aa14.73□□□□□ -0.05
ZNF558-205ENST00000597304 SMARCC2Q8TAQ2 1214 aa14.73□□□□□ -0.05
ZNF558-205ENST00000597304 LLPHQ9BRT6 129 aaKnown RBP14.73□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms