RNA–Protein interactions for RNA: ENST00000596545.5

FARP1-218, Transcript of FERM, ARH/RhoGEF and pleckstrin domain protein 1, humanhuman

TSL 5

Gene FARP1, Length 781 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FARP1-218ENST00000596545 C21orf2O43822 256 aa16.77■□□□□ 0.28
FARP1-218ENST00000596545 SF3B3Q15393 1217 aaKnown RBP16.77■□□□□ 0.28
FARP1-218ENST00000596545 ZKSCAN2Q63HK3 967 aa16.77■□□□□ 0.28
FARP1-218ENST00000596545 DDX46Q7L014 1031 aaKnown RBP16.77■□□□□ 0.28
FARP1-218ENST00000596545 GRM8O00222 908 aa16.76■□□□□ 0.27
FARP1-218ENST00000596545 FRAT1Q92837 279 aaPredicted RBP16.76■□□□□ 0.27
FARP1-218ENST00000596545 C9orf78Q9NZ63 289 aaPredicted RBP16.76■□□□□ 0.27
FARP1-218ENST00000596545 DICER1Q9UPY3 1922 aaKnown RBP16.76■□□□□ 0.27
FARP1-218ENST00000596545 LRRC37AA6NMS7 1700 aa16.76■□□□□ 0.27
FARP1-218ENST00000596545 UTRNP46939 3433 aa16.76■□□□□ 0.27
FARP1-218ENST00000596545 COL4A1P02462 1669 aa16.75■□□□□ 0.27
FARP1-218ENST00000596545 CASP7P55210 303 aa16.75■□□□□ 0.27
FARP1-218ENST00000596545 CTSWP56202 376 aa16.75■□□□□ 0.27
FARP1-218ENST00000596545 CCDC152Q4G0S7 254 aa16.75■□□□□ 0.27
FARP1-218ENST00000596545 SOGA3Q5TF21 947 aa16.75■□□□□ 0.27
FARP1-218ENST00000596545 INTS3Q68E01 1043 aaKnown RBP16.75■□□□□ 0.27
FARP1-218ENST00000596545 PPEF1O14829 653 aaPredicted RBP16.74■□□□□ 0.27
FARP1-218ENST00000596545 GRAPQ13588 217 aa16.74■□□□□ 0.27
FARP1-218ENST00000596545 PDE3AQ14432 1141 aa16.74■□□□□ 0.27
FARP1-218ENST00000596545 GRAPLQ8TC17 118 aaPredicted RBP16.74■□□□□ 0.27
FARP1-218ENST00000596545 C7orf43Q8WVR3 580 aa16.74■□□□□ 0.27
FARP1-218ENST00000596545 CCDC85AQ96PX6 553 aaPredicted RBP16.74■□□□□ 0.27
FARP1-218ENST00000596545 TIAM2Q8IVF5 1701 aa16.73■□□□□ 0.27
FARP1-218ENST00000596545 TRIM27P14373 513 aa16.73■□□□□ 0.27
FARP1-218ENST00000596545 RASSF7Q02833 373 aa16.73■□□□□ 0.27
FARP1-218ENST00000596545 CCDC93Q567U6 631 aa16.73■□□□□ 0.27
FARP1-218ENST00000596545 OLFM4Q6UX06 510 aa16.73■□□□□ 0.27
FARP1-218ENST00000596545 PLA2G12BQ9BX93 195 aa16.73■□□□□ 0.27
FARP1-218ENST00000596545 CHMP4BQ9H444 224 aaKnown RBP16.73■□□□□ 0.27
FARP1-218ENST00000596545 UTYO14607 1347 aa16.72■□□□□ 0.27
FARP1-218ENST00000596545 BBOX1O75936 387 aa16.72■□□□□ 0.27
FARP1-218ENST00000596545 TTLL11Q8NHH1 800 aa16.72■□□□□ 0.27
FARP1-218ENST00000596545 NFKBIEO00221 500 aa16.71■□□□□ 0.27
FARP1-218ENST00000596545 NBPF7P0C2Y1 421 aaPredicted RBP16.71■□□□□ 0.27
FARP1-218ENST00000596545 CC2D2BQ6DHV5 1058 aa16.71■□□□□ 0.27
FARP1-218ENST00000596545 CELF1Q92879 486 aaKnown RBP16.71■□□□□ 0.27
FARP1-218ENST00000596545 TMX4Q9H1E5 349 aaPredicted RBP16.71■□□□□ 0.27
FARP1-218ENST00000596545 TAOK3Q9H2K8 898 aa16.71■□□□□ 0.27
FARP1-218ENST00000596545 SEC31BQ9NQW1 1179 aa16.71■□□□□ 0.27
FARP1-218ENST00000596545 SNED1Q8TER0 1413 aa16.7■□□□□ 0.26
FARP1-218ENST00000596545 RTL9Q8NET4 1388 aa16.7■□□□□ 0.26
FARP1-218ENST00000596545 YY1P25490 414 aa16.7■□□□□ 0.26
FARP1-218ENST00000596545 TMC4Q7Z404 712 aa16.7■□□□□ 0.26
FARP1-218ENST00000596545 SLC51AQ86UW1 340 aa16.7■□□□□ 0.26
FARP1-218ENST00000596545 DZIP1LQ8IYY4 767 aaKnown RBP16.7■□□□□ 0.26
FARP1-218ENST00000596545 RTKN2Q8IZC4 609 aa16.7■□□□□ 0.26
FARP1-218ENST00000596545 CLUAP1Q96AJ1 413 aa16.7■□□□□ 0.26
FARP1-218ENST00000596545 GREM2Q9H772 168 aa16.7■□□□□ 0.26
FARP1-218ENST00000596545 TNNQ9UQP3 1299 aa16.7■□□□□ 0.26
FARP1-218ENST00000596545 ATP6V0A2Q9Y487 856 aa16.7■□□□□ 0.26
FARP1-218ENST00000596545 LTBP3Q9NS15 1303 aa16.7■□□□□ 0.26
FARP1-218ENST00000596545 FOXO4P98177 505 aa16.69■□□□□ 0.26
FARP1-218ENST00000596545 FAM161AQ3B820 660 aa16.69■□□□□ 0.26
FARP1-218ENST00000596545 USP44Q9H0E7 712 aa16.69■□□□□ 0.26
FARP1-218ENST00000596545 LTBP1Q14766 1721 aa16.68■□□□□ 0.26
FARP1-218ENST00000596545 CSF1RP07333 972 aa16.68■□□□□ 0.26
FARP1-218ENST00000596545 LMNB1P20700 586 aa16.68■□□□□ 0.26
FARP1-218ENST00000596545 RPS8P62241 208 aaKnown RBP16.68■□□□□ 0.26
FARP1-218ENST00000596545 SP8Q8IXZ3 490 aa16.68■□□□□ 0.26
FARP1-218ENST00000596545 FTSJ3Q8IY81 847 aaKnown RBP16.68■□□□□ 0.26
FARP1-218ENST00000596545 SUCLG2Q96I99 432 aa16.68■□□□□ 0.26
FARP1-218ENST00000596545 CDC5LQ99459 802 aaKnown RBP16.68■□□□□ 0.26
FARP1-218ENST00000596545 CHMP3Q9Y3E7 222 aa16.68■□□□□ 0.26
FARP1-218ENST00000596545 A0A1B0GUL6 1792 aa16.67■□□□□ 0.26
FARP1-218ENST00000596545 GNAI3P08754 354 aa16.67■□□□□ 0.26
FARP1-218ENST00000596545 ITGA6P23229 1130 aa16.67■□□□□ 0.26
FARP1-218ENST00000596545 PRELPP51888 382 aa16.67■□□□□ 0.26
FARP1-218ENST00000596545 FKBP4Q02790 459 aaKnown RBP eCLIP16.67■□□□□ 0.26
FARP1-218ENST00000596545 AAMPQ13685 434 aa16.67■□□□□ 0.26
FARP1-218ENST00000596545 GRIPAP1Q4V328 841 aa16.67■□□□□ 0.26
FARP1-218ENST00000596545 EPHA10Q5JZY3 1008 aa16.67■□□□□ 0.26
FARP1-218ENST00000596545 C9orf131Q5VYM1 1079 aa16.67■□□□□ 0.26
FARP1-218ENST00000596545 LMBR1LQ6UX01 489 aa16.67■□□□□ 0.26
FARP1-218ENST00000596545 ANKRD18AQ8IVF6 992 aa16.67■□□□□ 0.26
FARP1-218ENST00000596545 RNF181Q9P0P0 153 aa16.67■□□□□ 0.26
FARP1-218ENST00000596545 KAZALD1Q96I82 304 aa16.66■□□□□ 0.26
FARP1-218ENST00000596545 BICC1Q9H694 974 aaKnown RBP16.66■□□□□ 0.26
FARP1-218ENST00000596545 DUOX1Q9NRD9 1551 aa16.66■□□□□ 0.26
FARP1-218ENST00000596545 UBTFL1P0CB47 393 aaPredicted RBP16.65■□□□□ 0.26
FARP1-218ENST00000596545 TMEM57Q8N5G2 664 aa16.65■□□□□ 0.26
FARP1-218ENST00000596545 PSMD1Q99460 953 aa16.65■□□□□ 0.26
FARP1-218ENST00000596545 MEIS3Q99687 375 aa16.65■□□□□ 0.26
FARP1-218ENST00000596545 ANKRD18BA2A2Z9 1011 aa16.64■□□□□ 0.25
FARP1-218ENST00000596545 IGHMBP2P38935 993 aaKnown RBP16.64■□□□□ 0.25
FARP1-218ENST00000596545 IFIT5Q13325 482 aaKnown RBP16.64■□□□□ 0.25
FARP1-218ENST00000596545 DPP8Q6V1X1 898 aaPredicted RBP16.64■□□□□ 0.25
FARP1-218ENST00000596545 MPNDQ8N594 471 aa16.64■□□□□ 0.25
FARP1-218ENST00000596545 ZNF277Q9NRM2 450 aaPredicted RBP16.64■□□□□ 0.25
FARP1-218ENST00000596545 CCDC57Q2TAC2 916 aa16.63■□□□□ 0.25
FARP1-218ENST00000596545 RABL6Q3YEC7 729 aaPredicted RBP16.63■□□□□ 0.25
FARP1-218ENST00000596545 ANKRD44Q8N8A2 993 aa16.63■□□□□ 0.25
FARP1-218ENST00000596545 DDX19BQ9UMR2 479 aa16.63■□□□□ 0.25
FARP1-218ENST00000596545 NSFL1CQ9UNZ2 370 aaKnown RBP16.63■□□□□ 0.25
FARP1-218ENST00000596545 RLBP1P12271 317 aa16.62■□□□□ 0.25
FARP1-218ENST00000596545 IARSP41252 1262 aaKnown RBP16.62■□□□□ 0.25
FARP1-218ENST00000596545 RRP1P56182 461 aaKnown RBP16.62■□□□□ 0.25
FARP1-218ENST00000596545 TAF7LQ5H9L4 462 aa16.62■□□□□ 0.25
FARP1-218ENST00000596545 ITPRIPQ8IWB1 547 aa16.62■□□□□ 0.25
FARP1-218ENST00000596545 SUPT20HQ8NEM7 779 aa16.62■□□□□ 0.25
FARP1-218ENST00000596545 MPHOSPH8Q99549 860 aa16.62■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 93 ms