RNA–Protein interactions for RNA: ENST00000595726.1

SHKBP1-208, Transcript of SH3KBP1 binding protein 1, human

TSL 3

Gene SHKBP1, Length 684 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SHKBP1-208	ENST00000595726	SAGE1	Q9NXZ1	904 aa		18.35	■□□□□ 0.53
SHKBP1-208	ENST00000595726		H7C1D1	291 aa		18.34	■□□□□ 0.53
SHKBP1-208	ENST00000595726	EGFR	P00533	1210 aa		18.34	■□□□□ 0.53
SHKBP1-208	ENST00000595726	KIF6	Q6ZMV9	814 aa		18.34	■□□□□ 0.53
SHKBP1-208	ENST00000595726	MICALL2	Q8IY33	904 aa		18.34	■□□□□ 0.53
SHKBP1-208	ENST00000595726	SUPT20H	Q8NEM7	779 aa		18.34	■□□□□ 0.53
SHKBP1-208	ENST00000595726	NLRP3	Q96P20	1036 aa		18.34	■□□□□ 0.53
SHKBP1-208	ENST00000595726	ABCC4	O15439	1325 aa		18.33	■□□□□ 0.53
SHKBP1-208	ENST00000595726	KIAA2012	Q0VF49	1180 aa		18.33	■□□□□ 0.52
SHKBP1-208	ENST00000595726	TAF7	Q15545	349 aa	Predicted RBP	18.33	■□□□□ 0.52
SHKBP1-208	ENST00000595726	TBC1D10B	Q4KMP7	808 aa	Predicted RBP	18.33	■□□□□ 0.52
SHKBP1-208	ENST00000595726	KRT26	Q7Z3Y9	468 aa		18.33	■□□□□ 0.52
SHKBP1-208	ENST00000595726	CTU1	Q7Z7A3	348 aa	Known RBP	18.33	■□□□□ 0.52
SHKBP1-208	ENST00000595726	MPND	Q8N594	471 aa		18.33	■□□□□ 0.52
SHKBP1-208	ENST00000595726	CCDC102A	Q96A19	550 aa		18.33	■□□□□ 0.52
SHKBP1-208	ENST00000595726	CSRNP1	Q96S65	589 aa		18.33	■□□□□ 0.52
SHKBP1-208	ENST00000595726	GBA2	Q9HCG7	927 aa	Predicted RBP	18.33	■□□□□ 0.52
SHKBP1-208	ENST00000595726	NUP98	P52948	1817 aa		18.33	■□□□□ 0.52
SHKBP1-208	ENST00000595726	MKI67	P46013	3256 aa	Known RBP	18.33	■□□□□ 0.52
SHKBP1-208	ENST00000595726	CDHR2	Q9BYE9	1310 aa		18.32	■□□□□ 0.52
SHKBP1-208	ENST00000595726	ADM5	C9JUS6	153 aa		18.32	■□□□□ 0.52
SHKBP1-208	ENST00000595726	RBM26	Q5T8P6	1007 aa	Known RBP	18.32	■□□□□ 0.52
SHKBP1-208	ENST00000595726	C2orf69	Q8N8R5	385 aa		18.32	■□□□□ 0.52
SHKBP1-208	ENST00000595726	HPS5	Q9UPZ3	1129 aa		18.32	■□□□□ 0.52
SHKBP1-208	ENST00000595726	IBTK	Q9P2D0	1353 aa	Predicted RBP	18.3	■□□□□ 0.52
SHKBP1-208	ENST00000595726	SP8	Q8IXZ3	490 aa		18.3	■□□□□ 0.52
SHKBP1-208	ENST00000595726	BBOX1	O75936	387 aa		18.29	■□□□□ 0.52
SHKBP1-208	ENST00000595726	U2AF1L5	P0DN76	240 aa	Predicted RBP	18.29	■□□□□ 0.52
SHKBP1-208	ENST00000595726	U2AF1	Q01081	240 aa	Known RBP eCLIP	18.29	■□□□□ 0.52
SHKBP1-208	ENST00000595726	SLC10A5	Q5PT55	438 aa		18.29	■□□□□ 0.52
SHKBP1-208	ENST00000595726	GIGYF2	Q6Y7W6	1299 aa	Known RBP	18.29	■□□□□ 0.52
SHKBP1-208	ENST00000595726	PPP1R42	Q7Z4L9	355 aa		18.29	■□□□□ 0.52
SHKBP1-208	ENST00000595726	PSMD14	O00487	310 aa		18.28	■□□□□ 0.52
SHKBP1-208	ENST00000595726	HCLS1	P14317	486 aa	Predicted RBP	18.28	■□□□□ 0.52
SHKBP1-208	ENST00000595726	KCNQ5	Q9NR82	932 aa		18.28	■□□□□ 0.52
SHKBP1-208	ENST00000595726	SLC10A3	P09131	477 aa		18.27	■□□□□ 0.52
SHKBP1-208	ENST00000595726	DPF2	Q92785	391 aa		18.27	■□□□□ 0.52
SHKBP1-208	ENST00000595726	DCPS	Q96C86	337 aa	Known RBP	18.27	■□□□□ 0.52
SHKBP1-208	ENST00000595726	THUMPD2	Q9BTF0	503 aa	Known RBP	18.27	■□□□□ 0.52
SHKBP1-208	ENST00000595726	UTP14A	Q9BVJ6	771 aa	Known RBP	18.27	■□□□□ 0.52
SHKBP1-208	ENST00000595726	ASTN2	O75129	1339 aa	Predicted RBP	18.26	■□□□□ 0.51
SHKBP1-208	ENST00000595726	HTATSF1	O43719	755 aa	Known RBP	18.26	■□□□□ 0.51
SHKBP1-208	ENST00000595726	EIF4A1	P60842	406 aa	Known RBP	18.26	■□□□□ 0.51
SHKBP1-208	ENST00000595726	ZNF428	Q96B54	188 aa		18.26	■□□□□ 0.51
SHKBP1-208	ENST00000595726	DBNDD1	Q9H9R9	158 aa		18.26	■□□□□ 0.51
SHKBP1-208	ENST00000595726	POLR2A	P24928	1970 aa	Known RBP	18.25	■□□□□ 0.51
SHKBP1-208	ENST00000595726	RIMBP2	O15034	1052 aa		18.25	■□□□□ 0.51
SHKBP1-208	ENST00000595726	PARP10	Q53GL7	1025 aa		18.25	■□□□□ 0.51
SHKBP1-208	ENST00000595726	TBC1D8	O95759	1140 aa		18.24	■□□□□ 0.51
SHKBP1-208	ENST00000595726	CFAP53	Q96M91	514 aa		18.24	■□□□□ 0.51
SHKBP1-208	ENST00000595726	NUDC	Q9Y266	331 aa		18.24	■□□□□ 0.51
SHKBP1-208	ENST00000595726	DDX46	Q7L014	1031 aa	Known RBP	18.23	■□□□□ 0.51
SHKBP1-208	ENST00000595726	ZNF296	Q8WUU4	475 aa	Predicted RBP	18.23	■□□□□ 0.51
SHKBP1-208	ENST00000595726	HDAC9	Q9UKV0	1011 aa		18.23	■□□□□ 0.51
SHKBP1-208	ENST00000595726	LAMB4	A4D0S4	1761 aa		18.22	■□□□□ 0.51
SHKBP1-208	ENST00000595726	CENPF	P49454	3210 aa		18.22	■□□□□ 0.51
SHKBP1-208	ENST00000595726	AKAP11	Q9UKA4	1901 aa		18.22	■□□□□ 0.51
SHKBP1-208	ENST00000595726	ANXA1	P04083	346 aa		18.22	■□□□□ 0.51
SHKBP1-208	ENST00000595726	GRAP	Q13588	217 aa		18.22	■□□□□ 0.51
SHKBP1-208	ENST00000595726	DOK7	Q18PE1	504 aa		18.22	■□□□□ 0.51
SHKBP1-208	ENST00000595726	WASHC4	Q2M389	1173 aa		18.22	■□□□□ 0.51
SHKBP1-208	ENST00000595726	RASAL3	Q86YV0	1011 aa		18.22	■□□□□ 0.51
SHKBP1-208	ENST00000595726	GRAPL	Q8TC17	118 aa	Predicted RBP	18.22	■□□□□ 0.51
SHKBP1-208	ENST00000595726	CDCA5	Q96FF9	252 aa		18.22	■□□□□ 0.51
SHKBP1-208	ENST00000595726	GGA3	Q9NZ52	723 aa		18.22	■□□□□ 0.51
SHKBP1-208	ENST00000595726	HTT	P42858	3142 aa		18.22	■□□□□ 0.51
SHKBP1-208	ENST00000595726	MOB2	Q70IA6	237 aa		18.21	■□□□□ 0.51
SHKBP1-208	ENST00000595726	LRP10	Q7Z4F1	713 aa		18.21	■□□□□ 0.51
SHKBP1-208	ENST00000595726	SULF1	Q8IWU6	871 aa		18.21	■□□□□ 0.51
SHKBP1-208	ENST00000595726	NSFL1C	Q9UNZ2	370 aa	Known RBP	18.21	■□□□□ 0.51
SHKBP1-208	ENST00000595726	DUOX1	Q9NRD9	1551 aa		18.21	■□□□□ 0.51
SHKBP1-208	ENST00000595726	TAF1	P21675	1872 aa		18.2	■□□□□ 0.5
SHKBP1-208	ENST00000595726	PDIA6	Q15084	440 aa		18.2	■□□□□ 0.5
SHKBP1-208	ENST00000595726	PKN2	Q16513	984 aa	Known RBP	18.2	■□□□□ 0.5
SHKBP1-208	ENST00000595726	PROSER3	Q2NL68	480 aa		18.2	■□□□□ 0.5
SHKBP1-208	ENST00000595726	KIF4B	Q2VIQ3	1234 aa		18.2	■□□□□ 0.5
SHKBP1-208	ENST00000595726	HABP4	Q5JVS0	413 aa	Known RBP	18.2	■□□□□ 0.5
SHKBP1-208	ENST00000595726	PNISR	Q8TF01	805 aa	Known RBP	18.2	■□□□□ 0.5
SHKBP1-208	ENST00000595726	RTL9	Q8NET4	1388 aa		18.19	■□□□□ 0.5
SHKBP1-208	ENST00000595726	C6orf229	H3BNL8	230 aa		18.19	■□□□□ 0.5
SHKBP1-208	ENST00000595726	EIF2S2	P20042	333 aa	Known RBP	18.19	■□□□□ 0.5
SHKBP1-208	ENST00000595726	NLRP10	Q86W26	655 aa		18.19	■□□□□ 0.5
SHKBP1-208	ENST00000595726	POLL	Q9UGP5	575 aa		18.19	■□□□□ 0.5
SHKBP1-208	ENST00000595726	TRMT112	Q9UI30	125 aa	Known RBP	18.19	■□□□□ 0.5
SHKBP1-208	ENST00000595726	SCAF8	Q9UPN6	1271 aa	Known RBP	18.19	■□□□□ 0.5
SHKBP1-208	ENST00000595726	ECE2	O60344	883 aa		18.18	■□□□□ 0.5
SHKBP1-208	ENST00000595726	RPS12	P25398	132 aa	Known RBP	18.18	■□□□□ 0.5
SHKBP1-208	ENST00000595726	GCC1	Q96CN9	775 aa		18.18	■□□□□ 0.5
SHKBP1-208	ENST00000595726	GPSM2	P81274	684 aa		18.17	■□□□□ 0.5
SHKBP1-208	ENST00000595726	AIMP1	Q12904	312 aa	Known RBP	18.17	■□□□□ 0.5
SHKBP1-208	ENST00000595726	ANGEL2	Q5VTE6	544 aa	Known RBP	18.17	■□□□□ 0.5
SHKBP1-208	ENST00000595726	REM2	Q8IYK8	340 aa	Predicted RBP	18.17	■□□□□ 0.5
SHKBP1-208	ENST00000595726	CELF1	Q92879	486 aa	Known RBP	18.17	■□□□□ 0.5
SHKBP1-208	ENST00000595726	LAMB2	P55268	1798 aa		18.17	■□□□□ 0.5
SHKBP1-208	ENST00000595726	UBE2Q2L	H0YL09	131 aa		18.16	■□□□□ 0.5
SHKBP1-208	ENST00000595726	SCARF1	Q14162	830 aa		18.16	■□□□□ 0.5
SHKBP1-208	ENST00000595726	GPR25	O00155	361 aa		18.15	■□□□□ 0.5
SHKBP1-208	ENST00000595726	PPP2R1A	P30153	589 aa		18.15	■□□□□ 0.5
SHKBP1-208	ENST00000595726	PRAMEF18	Q5VWM3	479 aa		18.15	■□□□□ 0.5
SHKBP1-208	ENST00000595726	FBXO46	Q6PJ61	603 aa	Predicted RBP	18.15	■□□□□ 0.5

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