RNA–Protein interactions for RNA: ENST00000594759.5

LIG1-207, Transcript of DNA ligase 1, humanhuman

TSL 1 (best)

Gene LIG1, Length 4,102 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-207ENST00000594759 RAB11FIP3O75154 756 aa14.21□□□□□ -0.14
LIG1-207ENST00000594759 BRPF1P55201 1214 aaPredicted RBP14.21□□□□□ -0.14
LIG1-207ENST00000594759 CCDC158Q5M9N0 1113 aa14.21□□□□□ -0.14
LIG1-207ENST00000594759 CHD1O14646 1710 aa14.2□□□□□ -0.14
LIG1-207ENST00000594759 ATP7AQ04656 1500 aa14.2□□□□□ -0.14
LIG1-207ENST00000594759 MUM1L1Q5H9M0 696 aa14.2□□□□□ -0.14
LIG1-207ENST00000594759 KIF1CO43896 1103 aaKnown RBP14.2□□□□□ -0.14
LIG1-207ENST00000594759 RHOXF2BP0C7M4 288 aa14.2□□□□□ -0.14
LIG1-207ENST00000594759 MCM3P25205 808 aa14.2□□□□□ -0.14
LIG1-207ENST00000594759 POTEDQ86YR6 584 aa14.2□□□□□ -0.14
LIG1-207ENST00000594759 RHOXF2Q9BQY4 288 aa14.2□□□□□ -0.14
LIG1-207ENST00000594759 A0A087WUV0 522 aaPredicted RBP14.2□□□□□ -0.14
LIG1-207ENST00000594759 FOXO3O43524 673 aa14.2□□□□□ -0.14
LIG1-207ENST00000594759 ATP2B1P20020 1258 aa14.2□□□□□ -0.14
LIG1-207ENST00000594759 ST5P78524 1137 aa14.2□□□□□ -0.14
LIG1-207ENST00000594759 AIMP1Q12904 312 aaKnown RBP14.2□□□□□ -0.14
LIG1-207ENST00000594759 FMNL3Q8IVF7 1028 aa14.2□□□□□ -0.14
LIG1-207ENST00000594759 AFAP1L1Q8TED9 768 aa14.2□□□□□ -0.14
LIG1-207ENST00000594759 MBIPQ9NS73 344 aa14.2□□□□□ -0.14
LIG1-207ENST00000594759 CPSF2Q9P2I0 782 aaKnown RBP14.2□□□□□ -0.14
LIG1-207ENST00000594759 PALD1Q9ULE6 856 aa14.2□□□□□ -0.14
LIG1-207ENST00000594759 SUFUQ9UMX1 484 aa14.2□□□□□ -0.14
LIG1-207ENST00000594759 MPHOSPH10O00566 681 aaKnown RBP14.19□□□□□ -0.14
LIG1-207ENST00000594759 CPA1P15085 419 aa14.19□□□□□ -0.14
LIG1-207ENST00000594759 RNF216Q9NWF9 866 aaPredicted RBP14.19□□□□□ -0.14
LIG1-207ENST00000594759 MRVI1Q9Y6F6 885 aa14.19□□□□□ -0.14
LIG1-207ENST00000594759 FAM83GA6ND36 823 aa14.19□□□□□ -0.14
LIG1-207ENST00000594759 USHBP1Q8N6Y0 703 aa14.19□□□□□ -0.14
LIG1-207ENST00000594759 CPLX1O14810 134 aa14.19□□□□□ -0.14
LIG1-207ENST00000594759 EPB41L2O43491 1005 aaKnown RBP14.19□□□□□ -0.14
LIG1-207ENST00000594759 UBASH3AP57075 661 aa14.19□□□□□ -0.14
LIG1-207ENST00000594759 ZC3H6P61129 1189 aaKnown RBP14.19□□□□□ -0.14
LIG1-207ENST00000594759 AK9Q5TCS8 1911 aa14.19□□□□□ -0.14
LIG1-207ENST00000594759 CCDC148Q8NFR7 591 aa14.19□□□□□ -0.14
LIG1-207ENST00000594759 CLSTN2Q9H4D0 955 aa14.19□□□□□ -0.14
LIG1-207ENST00000594759 TRIM35Q9UPQ4 493 aa14.19□□□□□ -0.14
LIG1-207ENST00000594759 CCT4P50991 539 aaKnown RBP14.18□□□□□ -0.14
LIG1-207ENST00000594759 HSP90AB4PQ58FF6 505 aa14.18□□□□□ -0.14
LIG1-207ENST00000594759 CEP112Q8N8E3 955 aa14.18□□□□□ -0.14
LIG1-207ENST00000594759 PDE11AQ9HCR9 933 aa14.18□□□□□ -0.14
LIG1-207ENST00000594759 CTAGE15A4D2H0 777 aa14.18□□□□□ -0.14
LIG1-207ENST00000594759 CTAGE8P0CG41 777 aa14.18□□□□□ -0.14
LIG1-207ENST00000594759 LMOD1P29536 600 aaPredicted RBP14.18□□□□□ -0.14
LIG1-207ENST00000594759 CLNS1AP54105 237 aaKnown RBP14.18□□□□□ -0.14
LIG1-207ENST00000594759 RBM6P78332 1123 aaKnown RBP14.18□□□□□ -0.14
LIG1-207ENST00000594759 CTAGE6Q86UF2 777 aa14.18□□□□□ -0.14
LIG1-207ENST00000594759 CTAGE4Q8IX94 777 aa14.18□□□□□ -0.14
LIG1-207ENST00000594759 CLASRPQ8N2M8 674 aaKnown RBP14.18□□□□□ -0.14
LIG1-207ENST00000594759 FAM212AQ96EL1 285 aa14.18□□□□□ -0.14
LIG1-207ENST00000594759 TULP2O00295 520 aa14.18□□□□□ -0.14
LIG1-207ENST00000594759 CEP85Q6P2H3 762 aa14.18□□□□□ -0.14
LIG1-207ENST00000594759 EVA1CP58658 441 aa14.17□□□□□ -0.14
LIG1-207ENST00000594759 CUL4AQ13619 759 aa14.17□□□□□ -0.14
LIG1-207ENST00000594759 C8orf58Q8NAV2 365 aa14.17□□□□□ -0.14
LIG1-207ENST00000594759 MRFAP1L1Q96HT8 127 aa14.17□□□□□ -0.14
LIG1-207ENST00000594759 RABEP2Q9H5N1 569 aa14.17□□□□□ -0.14
LIG1-207ENST00000594759 POLR1AO95602 1720 aaPredicted RBP14.17□□□□□ -0.14
LIG1-207ENST00000594759 PPIP5K1Q6PFW1 1433 aa14.17□□□□□ -0.14
LIG1-207ENST00000594759 SLC3A2P08195 630 aaKnown RBP14.17□□□□□ -0.14
LIG1-207ENST00000594759 FILIP1LQ4L180 1135 aa14.17□□□□□ -0.14
LIG1-207ENST00000594759 KIAA1328Q86T90 577 aa14.17□□□□□ -0.14
LIG1-207ENST00000594759 RAPGEF4Q8WZA2 1011 aa14.17□□□□□ -0.14
LIG1-207ENST00000594759 MYO6Q9UM54 1294 aa14.17□□□□□ -0.14
LIG1-207ENST00000594759 WDHD1O75717 1129 aaPredicted RBP14.17□□□□□ -0.14
LIG1-207ENST00000594759 CHMLP26374 656 aa14.17□□□□□ -0.14
LIG1-207ENST00000594759 CCDC30Q5VVM6 783 aa14.17□□□□□ -0.14
LIG1-207ENST00000594759 TCEANC2Q96MN5 208 aa14.17□□□□□ -0.14
LIG1-207ENST00000594759 SIL1Q9H173 461 aa14.17□□□□□ -0.14
LIG1-207ENST00000594759 VEZTQ9HBM0 779 aa14.17□□□□□ -0.14
LIG1-207ENST00000594759 MPHOSPH8Q99549 860 aa14.17□□□□□ -0.14
LIG1-207ENST00000594759 C9orf78Q9NZ63 289 aaPredicted RBP14.17□□□□□ -0.14
LIG1-207ENST00000594759 ORC3Q9UBD5 711 aaPredicted RBP14.17□□□□□ -0.14
LIG1-207ENST00000594759 CHMP4BP1P59074 171 aa14.16□□□□□ -0.14
LIG1-207ENST00000594759 TDRD7Q8NHU6 1098 aaKnown RBP14.16□□□□□ -0.14
LIG1-207ENST00000594759 IMPACTQ9P2X3 320 aa14.16□□□□□ -0.14
LIG1-207ENST00000594759 POLKQ9UBT6 870 aa14.16□□□□□ -0.14
LIG1-207ENST00000594759 ACEP12821 1306 aa14.16□□□□□ -0.14
LIG1-207ENST00000594759 KARSQ15046 597 aaKnown RBP14.16□□□□□ -0.14
LIG1-207ENST00000594759 BRD3Q15059 726 aa14.16□□□□□ -0.14
LIG1-207ENST00000594759 JPH2Q9BR39 696 aaPredicted RBP14.16□□□□□ -0.14
LIG1-207ENST00000594759 POGZQ7Z3K3 1410 aa14.16□□□□□ -0.14
LIG1-207ENST00000594759 ARID5BQ14865 1188 aa14.16□□□□□ -0.14
LIG1-207ENST00000594759 KIF1BPQ96EK5 621 aa14.16□□□□□ -0.14
LIG1-207ENST00000594759 SATB1Q01826 763 aa14.15□□□□□ -0.14
LIG1-207ENST00000594759 LONRF2Q1L5Z9 754 aa14.15□□□□□ -0.14
LIG1-207ENST00000594759 HSP90AB2PQ58FF8 381 aa14.15□□□□□ -0.14
LIG1-207ENST00000594759 FAM76AQ8TAV0 307 aa14.15□□□□□ -0.14
LIG1-207ENST00000594759 SCLT1Q96NL6 688 aa14.15□□□□□ -0.14
LIG1-207ENST00000594759 FSD1Q9BTV5 496 aa14.15□□□□□ -0.14
LIG1-207ENST00000594759 USP27XA6NNY8 438 aa14.15□□□□□ -0.14
LIG1-207ENST00000594759 TADA2BQ86TJ2 420 aa14.15□□□□□ -0.14
LIG1-207ENST00000594759 YEATS2Q9ULM3 1422 aa14.15□□□□□ -0.14
LIG1-207ENST00000594759 GOLGA6L10A6NI86 522 aa14.15□□□□□ -0.14
LIG1-207ENST00000594759 TUBB4BP68371 445 aa14.15□□□□□ -0.14
LIG1-207ENST00000594759 CAPN7Q9Y6W3 813 aa14.15□□□□□ -0.14
LIG1-207ENST00000594759 PLA2R1Q13018 1463 aa14.14□□□□□ -0.15
LIG1-207ENST00000594759 TUBBP07437 444 aa14.14□□□□□ -0.15
LIG1-207ENST00000594759 AP1ARQ63HQ0 302 aa14.14□□□□□ -0.15
LIG1-207ENST00000594759 CNNM3Q8NE01 707 aa14.14□□□□□ -0.15
LIG1-207ENST00000594759 CPLX3Q8WVH0 158 aa14.14□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms