RNA–Protein interactions for RNA: ENST00000593912.5

VRK3-204, Transcript of vaccinia related kinase 3, humanhuman

TSL 2

Gene VRK3, Length 551 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-204ENST00000593912 RAD17O75943 681 aa4.45□□□□□ -1.7
VRK3-204ENST00000593912 NPR1P16066 1061 aa4.45□□□□□ -1.7
VRK3-204ENST00000593912 ST5P78524 1137 aa4.45□□□□□ -1.7
VRK3-204ENST00000593912 AOC3Q16853 763 aa4.45□□□□□ -1.7
VRK3-204ENST00000593912 MICALL2Q8IY33 904 aa4.45□□□□□ -1.7
VRK3-204ENST00000593912 IFNL2Q8IZJ0 200 aa4.45□□□□□ -1.7
VRK3-204ENST00000593912 TDHQ8IZJ6 230 aa4.45□□□□□ -1.7
VRK3-204ENST00000593912 USP38Q8NB14 1042 aa4.45□□□□□ -1.7
VRK3-204ENST00000593912 MYLIPQ8WY64 445 aa4.45□□□□□ -1.7
VRK3-204ENST00000593912 CDCA5Q96FF9 252 aa4.45□□□□□ -1.7
VRK3-204ENST00000593912 ERO1AQ96HE7 468 aa4.45□□□□□ -1.7
VRK3-204ENST00000593912 LRFN3Q9BTN0 628 aa4.45□□□□□ -1.7
VRK3-204ENST00000593912 BCL2L13Q9BXK5 485 aa4.45□□□□□ -1.7
VRK3-204ENST00000593912 CNOT7Q9UIV1 285 aaKnown RBP4.45□□□□□ -1.7
VRK3-204ENST00000593912 SCAF8Q9UPN6 1271 aaKnown RBP4.45□□□□□ -1.7
VRK3-204ENST00000593912 ARIH1Q9Y4X5 557 aaPredicted RBP4.45□□□□□ -1.7
VRK3-204ENST00000593912 NCOR1O75376 2440 aa4.45□□□□□ -1.7
VRK3-204ENST00000593912 C5orf42Q9H799 3197 aa4.45□□□□□ -1.7
VRK3-204ENST00000593912 ZNF646O15015 1829 aaPredicted RBP4.44□□□□□ -1.7
VRK3-204ENST00000593912 TONSLQ96HA7 1378 aa4.44□□□□□ -1.7
VRK3-204ENST00000593912 HAX1O00165 279 aa4.44□□□□□ -1.7
VRK3-204ENST00000593912 TCERG1O14776 1098 aaKnown RBP4.44□□□□□ -1.7
VRK3-204ENST00000593912 PPIP5K2O43314 1243 aa4.44□□□□□ -1.7
VRK3-204ENST00000593912 KRT37O76014 449 aa4.44□□□□□ -1.7
VRK3-204ENST00000593912 CYP19A1P11511 503 aaPredicted RBP4.44□□□□□ -1.7
VRK3-204ENST00000593912 SYN1P17600 705 aa4.44□□□□□ -1.7
VRK3-204ENST00000593912 CANXP27824 592 aaKnown RBP4.44□□□□□ -1.7
VRK3-204ENST00000593912 BMP8BP34820 402 aa4.44□□□□□ -1.7
VRK3-204ENST00000593912 RBM26Q5T8P6 1007 aaKnown RBP4.44□□□□□ -1.7
VRK3-204ENST00000593912 NBPF11Q86T75 865 aa4.44□□□□□ -1.7
VRK3-204ENST00000593912 NUTM1Q86Y26 1132 aa4.44□□□□□ -1.7
VRK3-204ENST00000593912 PPARGC1BQ86YN6 1023 aaKnown RBP4.44□□□□□ -1.7
VRK3-204ENST00000593912 CNKSR2Q8WXI2 1034 aa4.44□□□□□ -1.7
VRK3-204ENST00000593912 ZBTB4Q9P1Z0 1013 aaPredicted RBP4.44□□□□□ -1.7
VRK3-204ENST00000593912 REV3LO60673 3130 aa4.44□□□□□ -1.7
VRK3-204ENST00000593912 NCAPD2Q15021 1401 aa4.44□□□□□ -1.7
VRK3-204ENST00000593912 TCF20Q9UGU0 1960 aaKnown RBP4.44□□□□□ -1.7
VRK3-204ENST00000593912 TAF1P21675 1872 aa4.43□□□□□ -1.7
VRK3-204ENST00000593912 ERVV-2B6SEH9 535 aa4.43□□□□□ -1.7
VRK3-204ENST00000593912 IGF2BP3O00425 579 aaKnown RBP eCLIP4.43□□□□□ -1.7
VRK3-204ENST00000593912 FARP2O94887 1054 aaPredicted RBP4.43□□□□□ -1.7
VRK3-204ENST00000593912 MAGEA10P43363 369 aaPredicted RBP4.43□□□□□ -1.7
VRK3-204ENST00000593912 CABP4P57796 275 aa4.43□□□□□ -1.7
VRK3-204ENST00000593912 SREBF2Q12772 1141 aa4.43□□□□□ -1.7
VRK3-204ENST00000593912 PRAMEF18Q5VWM3 479 aa4.43□□□□□ -1.7
VRK3-204ENST00000593912 ADAMTS19Q8TE59 1207 aa4.43□□□□□ -1.7
VRK3-204ENST00000593912 DCPSQ96C86 337 aaKnown RBP4.43□□□□□ -1.7
VRK3-204ENST00000593912 NECAB3Q96P71 396 aaPredicted RBP4.43□□□□□ -1.7
VRK3-204ENST00000593912 UHRF1Q96T88 793 aaPredicted RBP4.43□□□□□ -1.7
VRK3-204ENST00000593912 GGA3Q9NZ52 723 aa4.43□□□□□ -1.7
VRK3-204ENST00000593912 TBC1D2BQ9UPU7 963 aa4.43□□□□□ -1.7
VRK3-204ENST00000593912 CACNA1BQ00975 2339 aa4.43□□□□□ -1.7
VRK3-204ENST00000593912 XIRP2A4UGR9 3374 aa4.42□□□□□ -1.7
VRK3-204ENST00000593912 PRAMEF22A3QJZ6 481 aa4.42□□□□□ -1.7
VRK3-204ENST00000593912 H7C1D1 291 aa4.42□□□□□ -1.7
VRK3-204ENST00000593912 SP3Q02447 781 aa4.42□□□□□ -1.7
VRK3-204ENST00000593912 EVX2Q03828 476 aa4.42□□□□□ -1.7
VRK3-204ENST00000593912 CRHR2Q13324 411 aa4.42□□□□□ -1.7
VRK3-204ENST00000593912 ZNF697Q5TEC3 545 aa4.42□□□□□ -1.7
VRK3-204ENST00000593912 FAM109BQ6ICB4 259 aaPredicted RBP4.42□□□□□ -1.7
VRK3-204ENST00000593912 IFNL1Q8IU54 200 aa4.42□□□□□ -1.7
VRK3-204ENST00000593912 SULF1Q8IWU6 871 aa4.42□□□□□ -1.7
VRK3-204ENST00000593912 C7orf61Q8IZ16 206 aa4.42□□□□□ -1.7
VRK3-204ENST00000593912 NFATC2IPQ8NCF5 419 aa4.42□□□□□ -1.7
VRK3-204ENST00000593912 TMC1Q8TDI8 760 aa4.42□□□□□ -1.7
VRK3-204ENST00000593912 COG3Q96JB2 828 aa4.42□□□□□ -1.7
VRK3-204ENST00000593912 SETDB2Q96T68 719 aa4.42□□□□□ -1.7
VRK3-204ENST00000593912 C1QTNF1Q9BXJ1 281 aa4.42□□□□□ -1.7
VRK3-204ENST00000593912 UBE2OQ9C0C9 1292 aaKnown RBP4.42□□□□□ -1.7
VRK3-204ENST00000593912 SLC12A5Q9H2X9 1139 aa4.42□□□□□ -1.7
VRK3-204ENST00000593912 ZNRF3Q9ULT6 936 aa4.42□□□□□ -1.7
VRK3-204ENST00000593912 ZNF330Q9Y3S2 320 aaPredicted RBP4.42□□□□□ -1.7
VRK3-204ENST00000593912 CDHR2Q9BYE9 1310 aa4.42□□□□□ -1.7
VRK3-204ENST00000593912 SSC5DA1L4H1 1573 aa4.41□□□□□ -1.7
VRK3-204ENST00000593912 FAM86C2PA6NEL3 165 aa4.41□□□□□ -1.7
VRK3-204ENST00000593912 FAM177BA6PVY3 158 aa4.41□□□□□ -1.7
VRK3-204ENST00000593912 YDJCA8MPS7 323 aa4.41□□□□□ -1.7
VRK3-204ENST00000593912 FOSL2P15408 326 aa4.41□□□□□ -1.7
VRK3-204ENST00000593912 GJA8P48165 433 aa4.41□□□□□ -1.7
VRK3-204ENST00000593912 SLC39A6Q13433 755 aa4.41□□□□□ -1.7
VRK3-204ENST00000593912 TTLL12Q14166 644 aaPredicted RBP4.41□□□□□ -1.7
VRK3-204ENST00000593912 HDGFL2Q7Z4V5 671 aaPredicted RBP4.41□□□□□ -1.7
VRK3-204ENST00000593912 ARHGAP39Q9C0H5 1083 aa4.41□□□□□ -1.7
VRK3-204ENST00000593912 EPHX3Q9H6B9 360 aa4.41□□□□□ -1.7
VRK3-204ENST00000593912 COL2A1P02458 1487 aaPredicted RBP4.41□□□□□ -1.7
VRK3-204ENST00000593912 ZDBF2Q9HCK1 2354 aa4.41□□□□□ -1.7
VRK3-204ENST00000593912 DNAH12Q6ZR08 3092 aa4.4□□□□□ -1.7
VRK3-204ENST00000593912 LAMB1P07942 1786 aa4.4□□□□□ -1.7
VRK3-204ENST00000593912 RIC1Q4ADV7 1423 aa4.4□□□□□ -1.7
VRK3-204ENST00000593912 KLRG2A4D1S0 409 aaPredicted RBP4.4□□□□□ -1.71
VRK3-204ENST00000593912 POTEMA6NI47 508 aa4.4□□□□□ -1.71
VRK3-204ENST00000593912 ALDH1A1P00352 501 aa4.4□□□□□ -1.71
VRK3-204ENST00000593912 CCL5P13501 91 aa4.4□□□□□ -1.71
VRK3-204ENST00000593912 ALDH1B1P30837 517 aa4.4□□□□□ -1.71
VRK3-204ENST00000593912 EIF5P55010 431 aaKnown RBP4.4□□□□□ -1.71
VRK3-204ENST00000593912 PTPN12Q05209 780 aaKnown RBP4.4□□□□□ -1.71
VRK3-204ENST00000593912 PRKG1Q13976 671 aa4.4□□□□□ -1.71
VRK3-204ENST00000593912 KIF4BQ2VIQ3 1234 aa4.4□□□□□ -1.71
VRK3-204ENST00000593912 ANGEL2Q5VTE6 544 aaKnown RBP4.4□□□□□ -1.71
VRK3-204ENST00000593912 SPRYD7Q5W111 196 aa4.4□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms