RNA–Protein interactions for RNA: ENST00000592060.5

MBD1-227, Transcript of methyl-CpG binding domain protein 1, humanhuman

TSL 1 (best)

Gene MBD1, Length 1,952 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-227ENST00000592060 ZNF589Q86UQ0 364 aaPredicted RBP18.94■□□□□ 0.62
MBD1-227ENST00000592060 SLC27A2O14975 620 aa18.93■□□□□ 0.62
MBD1-227ENST00000592060 IL15P40933 162 aaPredicted RBP18.93■□□□□ 0.62
MBD1-227ENST00000592060 SPEF2Q9C093 1822 aa18.93■□□□□ 0.62
MBD1-227ENST00000592060 CIAO1O76071 339 aa18.93■□□□□ 0.62
MBD1-227ENST00000592060 GAS2L3Q86XJ1 694 aa18.93■□□□□ 0.62
MBD1-227ENST00000592060 CHAMP1Q96JM3 812 aa18.93■□□□□ 0.62
MBD1-227ENST00000592060 ARXQ96QS3 562 aa18.93■□□□□ 0.62
MBD1-227ENST00000592060 EYA2O00167 538 aa18.92■□□□□ 0.62
MBD1-227ENST00000592060 LARGE1O95461 756 aa18.92■□□□□ 0.62
MBD1-227ENST00000592060 ZKSCAN1P17029 563 aaPredicted RBP18.92■□□□□ 0.62
MBD1-227ENST00000592060 GRPEL1Q9HAV7 217 aa18.92■□□□□ 0.62
MBD1-227ENST00000592060 PDRG1Q9NUG6 133 aa18.92■□□□□ 0.62
MBD1-227ENST00000592060 CYP46A1Q9Y6A2 500 aa18.92■□□□□ 0.62
MBD1-227ENST00000592060 PALLDQ8WX93 1383 aa18.92■□□□□ 0.62
MBD1-227ENST00000592060 LRRC24Q50LG9 513 aa18.92■□□□□ 0.62
MBD1-227ENST00000592060 FOXD4L5Q5VV16 416 aaPredicted RBP18.92■□□□□ 0.62
MBD1-227ENST00000592060 KIF6Q6ZMV9 814 aa18.92■□□□□ 0.62
MBD1-227ENST00000592060 FOXD4L4Q8WXT5 416 aaPredicted RBP18.92■□□□□ 0.62
MBD1-227ENST00000592060 NDUFB9Q9Y6M9 179 aa18.92■□□□□ 0.62
MBD1-227ENST00000592060 MAP3K15Q6ZN16 1313 aa18.91■□□□□ 0.62
MBD1-227ENST00000592060 TAF5LO75529 589 aa18.91■□□□□ 0.62
MBD1-227ENST00000592060 STARD3NLO95772 234 aa18.91■□□□□ 0.62
MBD1-227ENST00000592060 ZNF594Q96JF6 807 aaPredicted RBP18.91■□□□□ 0.62
MBD1-227ENST00000592060 SLC4A9Q96Q91 983 aa18.91■□□□□ 0.62
MBD1-227ENST00000592060 PLA2G12BQ9BX93 195 aa18.91■□□□□ 0.62
MBD1-227ENST00000592060 PANK2Q9BZ23 570 aa18.91■□□□□ 0.62
MBD1-227ENST00000592060 PRPF40AO75400 957 aaKnown RBP18.9■□□□□ 0.62
MBD1-227ENST00000592060 PCCAP05165 728 aaPredicted RBP18.9■□□□□ 0.62
MBD1-227ENST00000592060 KCNJ4P48050 445 aa18.9■□□□□ 0.62
MBD1-227ENST00000592060 USPL1Q5W0Q7 1092 aa18.9■□□□□ 0.62
MBD1-227ENST00000592060 DNAJC2Q99543 621 aaKnown RBP18.9■□□□□ 0.62
MBD1-227ENST00000592060 NUP98P52948 1817 aa18.9■□□□□ 0.62
MBD1-227ENST00000592060 WDR33Q9C0J8 1336 aaKnown RBP18.9■□□□□ 0.62
MBD1-227ENST00000592060 TSGA10IPQ3SY00 556 aa18.9■□□□□ 0.62
MBD1-227ENST00000592060 GPT2Q8TD30 523 aa18.9■□□□□ 0.62
MBD1-227ENST00000592060 LARP6Q9BRS8 491 aaKnown RBP18.9■□□□□ 0.62
MBD1-227ENST00000592060 MYH3P11055 1940 aa18.9■□□□□ 0.62
MBD1-227ENST00000592060 KBTBD3Q8NAB2 608 aa18.89■□□□□ 0.61
MBD1-227ENST00000592060 ZSCAN31Q96LW9 406 aaPredicted RBP18.89■□□□□ 0.61
MBD1-227ENST00000592060 HMG20BQ9P0W2 317 aa18.89■□□□□ 0.61
MBD1-227ENST00000592060 ZNF330Q9Y3S2 320 aaPredicted RBP18.89■□□□□ 0.61
MBD1-227ENST00000592060 PHLPP1O60346 1717 aa18.89■□□□□ 0.61
MBD1-227ENST00000592060 CYP19A1P11511 503 aaPredicted RBP18.88■□□□□ 0.61
MBD1-227ENST00000592060 ST3GAL1Q11201 340 aa18.88■□□□□ 0.61
MBD1-227ENST00000592060 RNF20Q5VTR2 975 aa18.88■□□□□ 0.61
MBD1-227ENST00000592060 GIGYF2Q6Y7W6 1299 aaKnown RBP18.88■□□□□ 0.61
MBD1-227ENST00000592060 PUS3Q9BZE2 481 aaKnown RBP18.88■□□□□ 0.61
MBD1-227ENST00000592060 SH2B1Q9NRF2 756 aaPredicted RBP18.88■□□□□ 0.61
MBD1-227ENST00000592060 ZSCAN21Q9Y5A6 473 aaPredicted RBP18.88■□□□□ 0.61
MBD1-227ENST00000592060 TAF6LQ9Y6J9 622 aa18.88■□□□□ 0.61
MBD1-227ENST00000592060 SH3TC1Q8TE82 1336 aa18.88■□□□□ 0.61
MBD1-227ENST00000592060 PSMA5P28066 241 aa18.88■□□□□ 0.61
MBD1-227ENST00000592060 COL9A3Q14050 684 aaPredicted RBP18.88■□□□□ 0.61
MBD1-227ENST00000592060 DDX46Q7L014 1031 aaKnown RBP18.88■□□□□ 0.61
MBD1-227ENST00000592060 CDHR2Q9BYE9 1310 aa18.87■□□□□ 0.61
MBD1-227ENST00000592060 EXOC5O00471 708 aa18.87■□□□□ 0.61
MBD1-227ENST00000592060 CHGBP05060 677 aa18.87■□□□□ 0.61
MBD1-227ENST00000592060 ZNF445P59923 1031 aa18.87■□□□□ 0.61
MBD1-227ENST00000592060 TIMM10P62072 90 aa18.87■□□□□ 0.61
MBD1-227ENST00000592060 TICAM2Q86XR7 235 aa18.87■□□□□ 0.61
MBD1-227ENST00000592060 ZBTB38Q8NAP3 1195 aaPredicted RBP18.87■□□□□ 0.61
MBD1-227ENST00000592060 NEUROD6Q96NK8 337 aa18.87■□□□□ 0.61
MBD1-227ENST00000592060 ALDH8A1Q9H2A2 487 aaPredicted RBP18.87■□□□□ 0.61
MBD1-227ENST00000592060 FBXO3Q9UK99 471 aa18.87■□□□□ 0.61
MBD1-227ENST00000592060 CSF1RP07333 972 aa18.86■□□□□ 0.61
MBD1-227ENST00000592060 CAVIN1Q6NZI2 390 aaKnown RBP18.86■□□□□ 0.61
MBD1-227ENST00000592060 CICQ96RK0 1608 aaPredicted RBP18.86■□□□□ 0.61
MBD1-227ENST00000592060 A0A1B0GUL7 405 aa18.86■□□□□ 0.61
MBD1-227ENST00000592060 HLFQ16534 295 aa18.86■□□□□ 0.61
MBD1-227ENST00000592060 FAM89AQ96GI7 184 aa18.86■□□□□ 0.61
MBD1-227ENST00000592060 PAG1Q9NWQ8 432 aa18.86■□□□□ 0.61
MBD1-227ENST00000592060 TCHHQ07283 1943 aa18.86■□□□□ 0.61
MBD1-227ENST00000592060 RREB1Q92766 1687 aa18.86■□□□□ 0.61
MBD1-227ENST00000592060 LAMA4Q16363 1823 aa18.85■□□□□ 0.61
MBD1-227ENST00000592060 RPS6KB1P23443 525 aa18.85■□□□□ 0.61
MBD1-227ENST00000592060 ME3Q16798 604 aa18.85■□□□□ 0.61
MBD1-227ENST00000592060 CCDC57Q2TAC2 916 aa18.85■□□□□ 0.61
MBD1-227ENST00000592060 MCMDC2Q4G0Z9 681 aa18.85■□□□□ 0.61
MBD1-227ENST00000592060 CCDC129Q6ZRS4 1044 aa18.85■□□□□ 0.61
MBD1-227ENST00000592060 CCDC83Q8IWF9 413 aa18.85■□□□□ 0.61
MBD1-227ENST00000592060 PPIL4Q8WUA2 492 aaKnown RBP eCLIP18.85■□□□□ 0.61
MBD1-227ENST00000592060 SEC62Q99442 399 aaKnown RBP18.85■□□□□ 0.61
MBD1-227ENST00000592060 SMC3Q9UQE7 1217 aa18.85■□□□□ 0.61
MBD1-227ENST00000592060 RIC1Q4ADV7 1423 aa18.85■□□□□ 0.61
MBD1-227ENST00000592060 ZSCAN23Q3MJ62 389 aa18.84■□□□□ 0.61
MBD1-227ENST00000592060 BLOC1S2Q6QNY1 142 aa18.84■□□□□ 0.61
MBD1-227ENST00000592060 NLRP10Q86W26 655 aa18.84■□□□□ 0.61
MBD1-227ENST00000592060 TPCN1Q9ULQ1 816 aa18.84■□□□□ 0.61
MBD1-227ENST00000592060 ZBTB1Q9Y2K1 713 aa18.84■□□□□ 0.61
MBD1-227ENST00000592060 CCDC9Q9Y3X0 531 aaKnown RBP18.84■□□□□ 0.61
MBD1-227ENST00000592060 KAT6BQ8WYB5 2073 aa18.84■□□□□ 0.61
MBD1-227ENST00000592060 GOLIM4O00461 696 aa18.84■□□□□ 0.61
MBD1-227ENST00000592060 ZSCAN22P10073 491 aaPredicted RBP18.84■□□□□ 0.61
MBD1-227ENST00000592060 MBD3O95983 291 aa18.83■□□□□ 0.61
MBD1-227ENST00000592060 NCLP19338 710 aaKnown RBP18.83■□□□□ 0.61
MBD1-227ENST00000592060 SYT1P21579 422 aa18.83■□□□□ 0.61
MBD1-227ENST00000592060 HSP90AB3PQ58FF7 597 aa18.83■□□□□ 0.61
MBD1-227ENST00000592060 CEP126Q9P2H0 1117 aa18.83■□□□□ 0.61
MBD1-227ENST00000592060 NSFL1CQ9UNZ2 370 aaKnown RBP18.83■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 125.5 ms