RNA–Protein interactions for RNA: ENST00000592054.5

DNMT1-226, Transcript of DNA methyltransferase 1, humanhuman

TSL 4

Gene DNMT1, Length 591 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-226ENST00000592054 R3HDM1Q15032 1099 aaKnown RBP5.67□□□□□ -1.5
DNMT1-226ENST00000592054 TMEM132AQ24JP5 1023 aa5.67□□□□□ -1.5
DNMT1-226ENST00000592054 USP21Q9UK80 565 aa5.67□□□□□ -1.5
DNMT1-226ENST00000592054 COG6Q9Y2V7 657 aa5.67□□□□□ -1.5
DNMT1-226ENST00000592054 ZNF330Q9Y3S2 320 aaPredicted RBP5.67□□□□□ -1.5
DNMT1-226ENST00000592054 PRDM15P57071 1507 aaPredicted RBP5.67□□□□□ -1.5
DNMT1-226ENST00000592054 UNC13BO14795 1591 aa5.67□□□□□ -1.5
DNMT1-226ENST00000592054 DIP2AQ14689 1571 aa5.67□□□□□ -1.5
DNMT1-226ENST00000592054 MIA2Q96PC5 1412 aa5.66□□□□□ -1.5
DNMT1-226ENST00000592054 A2MP01023 1474 aa5.66□□□□□ -1.5
DNMT1-226ENST00000592054 TSGA10IPQ3SY00 556 aa5.66□□□□□ -1.5
DNMT1-226ENST00000592054 ZNF592Q92610 1267 aa5.66□□□□□ -1.5
DNMT1-226ENST00000592054 SAMD9LQ8IVG5 1584 aa5.65□□□□□ -1.5
DNMT1-226ENST00000592054 KCNA6P17658 529 aa5.65□□□□□ -1.5
DNMT1-226ENST00000592054 FIGNL1Q6PIW4 674 aa5.65□□□□□ -1.5
DNMT1-226ENST00000592054 PLVAPQ9BX97 442 aa5.65□□□□□ -1.5
DNMT1-226ENST00000592054 NDFIP2Q9NV92 336 aa5.65□□□□□ -1.5
DNMT1-226ENST00000592054 SPAG9O60271 1321 aaKnown RBP5.65□□□□□ -1.51
DNMT1-226ENST00000592054 UBR1Q8IWV7 1749 aa5.65□□□□□ -1.51
DNMT1-226ENST00000592054 BRWD3Q6RI45 1802 aa5.64□□□□□ -1.51
DNMT1-226ENST00000592054 NKTRP30414 1462 aaKnown RBP5.64□□□□□ -1.51
DNMT1-226ENST00000592054 PREX2Q70Z35 1606 aa5.64□□□□□ -1.51
DNMT1-226ENST00000592054 APBB1O00213 710 aa5.64□□□□□ -1.51
DNMT1-226ENST00000592054 ADH6P28332 368 aa5.64□□□□□ -1.51
DNMT1-226ENST00000592054 PRELPP51888 382 aa5.64□□□□□ -1.51
DNMT1-226ENST00000592054 ESCO1Q5FWF5 840 aa5.64□□□□□ -1.51
DNMT1-226ENST00000592054 LCE3BQ5TA77 95 aa5.64□□□□□ -1.51
DNMT1-226ENST00000592054 NBPF11Q86T75 865 aa5.64□□□□□ -1.51
DNMT1-226ENST00000592054 C14orf37Q86TY3 774 aa5.64□□□□□ -1.51
DNMT1-226ENST00000592054 TXNDC2Q86VQ3 553 aa5.64□□□□□ -1.51
DNMT1-226ENST00000592054 XAGE2Q96GT9 111 aa5.64□□□□□ -1.51
DNMT1-226ENST00000592054 CCDC85AQ96PX6 553 aaPredicted RBP5.64□□□□□ -1.51
DNMT1-226ENST00000592054 CDCA7Q9BWT1 371 aaPredicted RBP5.64□□□□□ -1.51
DNMT1-226ENST00000592054 ZCCHC2Q9C0B9 1178 aaKnown RBP5.64□□□□□ -1.51
DNMT1-226ENST00000592054 FHDC1Q9C0D6 1143 aaPredicted RBP5.64□□□□□ -1.51
DNMT1-226ENST00000592054 CEP126Q9P2H0 1117 aa5.64□□□□□ -1.51
DNMT1-226ENST00000592054 PCDHGC4Q9Y5F7 938 aa5.64□□□□□ -1.51
DNMT1-226ENST00000592054 EID1Q9Y6B2 187 aa5.64□□□□□ -1.51
DNMT1-226ENST00000592054 SPHKAPQ2M3C7 1700 aa5.64□□□□□ -1.51
DNMT1-226ENST00000592054 NINLQ9Y2I6 1382 aa5.64□□□□□ -1.51
DNMT1-226ENST00000592054 SPATA31C1P0DKV0 1188 aa5.63□□□□□ -1.51
DNMT1-226ENST00000592054 PLA2G4AP47712 749 aa5.63□□□□□ -1.51
DNMT1-226ENST00000592054 TBC1D9Q6ZT07 1266 aa5.63□□□□□ -1.51
DNMT1-226ENST00000592054 RHBDD1Q8TEB9 315 aa5.63□□□□□ -1.51
DNMT1-226ENST00000592054 CRISPLD1Q9H336 500 aa5.63□□□□□ -1.51
DNMT1-226ENST00000592054 ZFP64Q9NPA5 681 aa5.63□□□□□ -1.51
DNMT1-226ENST00000592054 CDK11AQ9UQ88 783 aaPredicted RBP5.63□□□□□ -1.51
DNMT1-226ENST00000592054 RTEL1-TNFRSF6BF6WH68 1400 aa5.63□□□□□ -1.51
DNMT1-226ENST00000592054 CFAP65Q6ZU64 1925 aaKnown RBP5.62□□□□□ -1.51
DNMT1-226ENST00000592054 DCDC2BA2VCK2 349 aa5.62□□□□□ -1.51
DNMT1-226ENST00000592054 ATXN7O15265 892 aaPredicted RBP5.62□□□□□ -1.51
DNMT1-226ENST00000592054 TLR1Q15399 786 aa5.62□□□□□ -1.51
DNMT1-226ENST00000592054 RSPO4Q2I0M5 234 aaPredicted RBP5.62□□□□□ -1.51
DNMT1-226ENST00000592054 LRRC59Q96AG4 307 aaKnown RBP5.62□□□□□ -1.51
DNMT1-226ENST00000592054 CLUAP1Q96AJ1 413 aa5.62□□□□□ -1.51
DNMT1-226ENST00000592054 AIDAQ96BJ3 306 aa5.62□□□□□ -1.51
DNMT1-226ENST00000592054 TRIM11Q96F44 468 aa5.62□□□□□ -1.51
DNMT1-226ENST00000592054 HRH3Q9Y5N1 445 aa5.62□□□□□ -1.51
DNMT1-226ENST00000592054 WASHC2CQ9Y4E1 1318 aa5.62□□□□□ -1.51
DNMT1-226ENST00000592054 ATRNO75882 1429 aa5.62□□□□□ -1.51
DNMT1-226ENST00000592054 CLIP1P30622 1438 aa5.62□□□□□ -1.51
DNMT1-226ENST00000592054 INO80Q9ULG1 1556 aaPredicted RBP5.62□□□□□ -1.51
DNMT1-226ENST00000592054 POM121CA8CG34 1229 aa5.61□□□□□ -1.51
DNMT1-226ENST00000592054 KHNYNO15037 678 aaKnown RBP5.61□□□□□ -1.51
DNMT1-226ENST00000592054 STAU1O95793 577 aaKnown RBP5.61□□□□□ -1.51
DNMT1-226ENST00000592054 APBA3O96018 575 aa5.61□□□□□ -1.51
DNMT1-226ENST00000592054 ATF3P18847 181 aa5.61□□□□□ -1.51
DNMT1-226ENST00000592054 CD33P20138 364 aa5.61□□□□□ -1.51
DNMT1-226ENST00000592054 RANGAP1P46060 587 aaPredicted RBP5.61□□□□□ -1.51
DNMT1-226ENST00000592054 PCBP4P57723 403 aaKnown RBP5.61□□□□□ -1.51
DNMT1-226ENST00000592054 FOXD4L6Q3SYB3 417 aaPredicted RBP5.61□□□□□ -1.51
DNMT1-226ENST00000592054 PRRT3Q5FWE3 981 aa5.61□□□□□ -1.51
DNMT1-226ENST00000592054 FOXD4L3Q6VB84 417 aaPredicted RBP5.61□□□□□ -1.51
DNMT1-226ENST00000592054 PHTF2Q8N3S3 785 aa5.61□□□□□ -1.51
DNMT1-226ENST00000592054 PRM3Q9NNZ6 103 aa5.61□□□□□ -1.51
DNMT1-226ENST00000592054 TPSG1Q9NRR2 321 aa5.61□□□□□ -1.51
DNMT1-226ENST00000592054 PRR12Q9ULL5 1215 aa5.61□□□□□ -1.51
DNMT1-226ENST00000592054 RGPD1P0DJD0 1748 aa5.6□□□□□ -1.51
DNMT1-226ENST00000592054 SIPA1L2Q9P2F8 1722 aaPredicted RBP5.6□□□□□ -1.51
DNMT1-226ENST00000592054 SLIT1O75093 1534 aa5.6□□□□□ -1.51
DNMT1-226ENST00000592054 NCOA2Q15596 1464 aa5.6□□□□□ -1.51
DNMT1-226ENST00000592054 ARHGAP23Q9P227 1491 aa5.6□□□□□ -1.51
DNMT1-226ENST00000592054 SETD5Q9C0A6 1442 aa5.6□□□□□ -1.51
DNMT1-226ENST00000592054 SPDYE3A6NKU9 549 aa5.6□□□□□ -1.51
DNMT1-226ENST00000592054 PIK3CDO00329 1044 aa5.6□□□□□ -1.51
DNMT1-226ENST00000592054 MAPTP10636 758 aaKnown RBP5.6□□□□□ -1.51
DNMT1-226ENST00000592054 UBTFP17480 764 aaKnown RBP5.6□□□□□ -1.51
DNMT1-226ENST00000592054 LTKP29376 864 aa5.6□□□□□ -1.51
DNMT1-226ENST00000592054 ARSJQ5FYB0 599 aaPredicted RBP5.6□□□□□ -1.51
DNMT1-226ENST00000592054 ARTNQ5T4W7 220 aa5.6□□□□□ -1.51
DNMT1-226ENST00000592054 FCHSD1Q86WN1 690 aa5.6□□□□□ -1.51
DNMT1-226ENST00000592054 PPARGC1BQ86YN6 1023 aaKnown RBP5.6□□□□□ -1.51
DNMT1-226ENST00000592054 TNS4Q8IZW8 715 aa5.6□□□□□ -1.51
DNMT1-226ENST00000592054 KLF15Q9UIH9 416 aa5.6□□□□□ -1.51
DNMT1-226ENST00000592054 MROH1Q8NDA8 1641 aa5.59□□□□□ -1.51
DNMT1-226ENST00000592054 SYCP2Q9BX26 1530 aa5.59□□□□□ -1.51
DNMT1-226ENST00000592054 DYRK3O43781 588 aa5.59□□□□□ -1.51
DNMT1-226ENST00000592054 EIF4G2P78344 907 aaKnown RBP eCLIP5.59□□□□□ -1.51
DNMT1-226ENST00000592054 NKAPLQ5M9Q1 402 aa5.59□□□□□ -1.51
DNMT1-226ENST00000592054 NLRP8Q86W28 1048 aa5.59□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 71 ms