RNA–Protein interactions for RNA: ENST00000591126.5

SMAD4-212, Transcript of SMAD family member 4, humanhuman

TSL 1 (best)

Gene SMAD4, Length 4,970 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-212ENST00000591126 KRT23Q9C075 422 aa7.41□□□□□ -1.22
SMAD4-212ENST00000591126 IREB2P48200 963 aaKnown RBP7.41□□□□□ -1.22
SMAD4-212ENST00000591126 LRRC27Q9C0I9 530 aa7.41□□□□□ -1.22
SMAD4-212ENST00000591126 STK24Q9Y6E0 443 aa7.41□□□□□ -1.22
SMAD4-212ENST00000591126 RNF17Q9BXT8 1623 aaKnown RBP7.41□□□□□ -1.22
SMAD4-212ENST00000591126 STXBP4Q6ZWJ1 553 aa7.41□□□□□ -1.22
SMAD4-212ENST00000591126 UBE3BQ7Z3V4 1068 aa7.41□□□□□ -1.22
SMAD4-212ENST00000591126 ZNF396Q96N95 335 aaPredicted RBP7.41□□□□□ -1.22
SMAD4-212ENST00000591126 ERBB3P21860 1342 aa7.41□□□□□ -1.22
SMAD4-212ENST00000591126 SOS2Q07890 1332 aaPredicted RBP7.41□□□□□ -1.22
SMAD4-212ENST00000591126 CLTCQ00610 1675 aaKnown RBP7.41□□□□□ -1.22
SMAD4-212ENST00000591126 KRT18P05783 430 aaKnown RBP7.4□□□□□ -1.22
SMAD4-212ENST00000591126 CALM1P0DP23 149 aa7.4□□□□□ -1.22
SMAD4-212ENST00000591126 CALM2P0DP24 149 aa7.4□□□□□ -1.22
SMAD4-212ENST00000591126 CALM3P0DP25 149 aa7.4□□□□□ -1.22
SMAD4-212ENST00000591126 GRM1Q13255 1194 aa7.4□□□□□ -1.22
SMAD4-212ENST00000591126 MTHFSDQ2M296 383 aaKnown RBP7.4□□□□□ -1.22
SMAD4-212ENST00000591126 ELMSAN1Q6PJG2 1045 aa7.4□□□□□ -1.22
SMAD4-212ENST00000591126 CATIPQ7Z7H3 387 aa7.4□□□□□ -1.22
SMAD4-212ENST00000591126 PNMA8AQ86V59 439 aaPredicted RBP7.4□□□□□ -1.22
SMAD4-212ENST00000591126 VTI1AQ96AJ9 217 aa7.4□□□□□ -1.22
SMAD4-212ENST00000591126 SCLT1Q96NL6 688 aa7.4□□□□□ -1.22
SMAD4-212ENST00000591126 KCNG1Q9UIX4 513 aa7.4□□□□□ -1.22
SMAD4-212ENST00000591126 PNMA3Q9UL41 463 aa7.4□□□□□ -1.22
SMAD4-212ENST00000591126 FER1L4A9Z1Z3 1794 aa7.4□□□□□ -1.22
SMAD4-212ENST00000591126 SERPINB2P05120 415 aa7.4□□□□□ -1.22
SMAD4-212ENST00000591126 OSBPP22059 807 aa7.4□□□□□ -1.22
SMAD4-212ENST00000591126 MTFR1LQ9H019 292 aa7.4□□□□□ -1.22
SMAD4-212ENST00000591126 SIL1Q9H173 461 aa7.4□□□□□ -1.22
SMAD4-212ENST00000591126 INO80Q9ULG1 1556 aaPredicted RBP7.4□□□□□ -1.22
SMAD4-212ENST00000591126 RGL2O15211 777 aa7.4□□□□□ -1.23
SMAD4-212ENST00000591126 ZEB2O60315 1214 aa7.4□□□□□ -1.23
SMAD4-212ENST00000591126 METTL22Q9BUU2 404 aaPredicted RBP7.4□□□□□ -1.23
SMAD4-212ENST00000591126 XPO5Q9HAV4 1204 aaKnown RBP eCLIP7.4□□□□□ -1.23
SMAD4-212ENST00000591126 GPBP1L1Q9HC44 474 aaPredicted RBP7.4□□□□□ -1.23
SMAD4-212ENST00000591126 GPHNQ9NQX3 736 aaPredicted RBP7.4□□□□□ -1.23
SMAD4-212ENST00000591126 RPS8P62241 208 aaKnown RBP7.4□□□□□ -1.23
SMAD4-212ENST00000591126 TXNRD1Q16881 649 aa7.4□□□□□ -1.23
SMAD4-212ENST00000591126 PALLDQ8WX93 1383 aa7.4□□□□□ -1.23
SMAD4-212ENST00000591126 PUM3Q15397 648 aaKnown RBP7.39□□□□□ -1.23
SMAD4-212ENST00000591126 FERMT2Q96AC1 680 aa7.39□□□□□ -1.23
SMAD4-212ENST00000591126 EVI5LQ96CN4 794 aa7.39□□□□□ -1.23
SMAD4-212ENST00000591126 TMEM266Q2M3C6 531 aa7.39□□□□□ -1.23
SMAD4-212ENST00000591126 SMC3Q9UQE7 1217 aa7.39□□□□□ -1.23
SMAD4-212ENST00000591126 PI4KAP2A4QPH2 592 aa7.39□□□□□ -1.23
SMAD4-212ENST00000591126 ATP5J2-PTCD1G3V325 749 aa7.39□□□□□ -1.23
SMAD4-212ENST00000591126 IPO7O95373 1038 aaKnown RBP7.39□□□□□ -1.23
SMAD4-212ENST00000591126 IRX3P78415 501 aaPredicted RBP7.39□□□□□ -1.23
SMAD4-212ENST00000591126 DHX8Q14562 1220 aaKnown RBP7.39□□□□□ -1.23
SMAD4-212ENST00000591126 AXDND1Q5T1B0 1012 aaPredicted RBP7.39□□□□□ -1.23
SMAD4-212ENST00000591126 CIAPIN1Q6FI81 312 aa7.39□□□□□ -1.23
SMAD4-212ENST00000591126 TXLNBQ8N3L3 684 aa7.39□□□□□ -1.23
SMAD4-212ENST00000591126 PI4KAP1Q8N8J0 262 aa7.39□□□□□ -1.23
SMAD4-212ENST00000591126 SLKQ9H2G2 1235 aaPredicted RBP7.39□□□□□ -1.23
SMAD4-212ENST00000591126 KAT14Q9H8E8 782 aa7.39□□□□□ -1.23
SMAD4-212ENST00000591126 USP31Q70CQ4 1352 aa7.39□□□□□ -1.23
SMAD4-212ENST00000591126 UNC13BO14795 1591 aa7.39□□□□□ -1.23
SMAD4-212ENST00000591126 PPEF1O14829 653 aaPredicted RBP7.39□□□□□ -1.23
SMAD4-212ENST00000591126 COPB2P35606 906 aa7.39□□□□□ -1.23
SMAD4-212ENST00000591126 STIM1Q13586 685 aa7.39□□□□□ -1.23
SMAD4-212ENST00000591126 MCTP1Q6DN14 999 aa7.39□□□□□ -1.23
SMAD4-212ENST00000591126 CYP46A1Q9Y6A2 500 aa7.39□□□□□ -1.23
SMAD4-212ENST00000591126 XDHP47989 1333 aa7.38□□□□□ -1.23
SMAD4-212ENST00000591126 SPATA31A5Q5VU36 1347 aa7.38□□□□□ -1.23
SMAD4-212ENST00000591126 SPATA31A7Q8IWB4 1347 aa7.38□□□□□ -1.23
SMAD4-212ENST00000591126 ZBED4O75132 1171 aa7.38□□□□□ -1.23
SMAD4-212ENST00000591126 USP14P54578 494 aa7.38□□□□□ -1.23
SMAD4-212ENST00000591126 GTF3C2Q8WUA4 911 aaPredicted RBP7.38□□□□□ -1.23
SMAD4-212ENST00000591126 TEKT1Q969V4 418 aa7.38□□□□□ -1.23
SMAD4-212ENST00000591126 GTPBP4Q9BZE4 634 aaKnown RBP7.38□□□□□ -1.23
SMAD4-212ENST00000591126 ABT1Q9ULW3 272 aaKnown RBP7.38□□□□□ -1.23
SMAD4-212ENST00000591126 CDC42BPAQ5VT25 1732 aa7.38□□□□□ -1.23
SMAD4-212ENST00000591126 SPATA31A1Q5TZJ5 1347 aa7.38□□□□□ -1.23
SMAD4-212ENST00000591126 RAD50Q92878 1312 aa7.38□□□□□ -1.23
SMAD4-212ENST00000591126 AEBP1Q8IUX7 1158 aa7.38□□□□□ -1.23
SMAD4-212ENST00000591126 CCDC148Q8NFR7 591 aa7.38□□□□□ -1.23
SMAD4-212ENST00000591126 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP7.38□□□□□ -1.23
SMAD4-212ENST00000591126 ZNF213O14771 459 aa7.38□□□□□ -1.23
SMAD4-212ENST00000591126 TGFB2P61812 414 aa7.38□□□□□ -1.23
SMAD4-212ENST00000591126 RBM26Q5T8P6 1007 aaKnown RBP7.38□□□□□ -1.23
SMAD4-212ENST00000591126 APOBEC3FQ8IUX4 373 aaKnown RBP7.38□□□□□ -1.23
SMAD4-212ENST00000591126 DNAJC10Q8IXB1 793 aa7.38□□□□□ -1.23
SMAD4-212ENST00000591126 BICD2Q8TD16 824 aa7.38□□□□□ -1.23
SMAD4-212ENST00000591126 SPATA31E1Q6ZUB1 1445 aa7.38□□□□□ -1.23
SMAD4-212ENST00000591126 EPS15P42566 896 aa7.38□□□□□ -1.23
SMAD4-212ENST00000591126 ESR2Q92731 530 aa7.38□□□□□ -1.23
SMAD4-212ENST00000591126 DRC1Q96MC2 740 aa7.38□□□□□ -1.23
SMAD4-212ENST00000591126 SPATA31D1Q6ZQQ2 1576 aa7.38□□□□□ -1.23
SMAD4-212ENST00000591126 MAP3K15Q6ZN16 1313 aa7.37□□□□□ -1.23
SMAD4-212ENST00000591126 CRKLP46109 303 aaKnown RBP7.37□□□□□ -1.23
SMAD4-212ENST00000591126 NUP133Q8WUM0 1156 aa7.37□□□□□ -1.23
SMAD4-212ENST00000591126 ZNF408Q9H9D4 720 aa7.37□□□□□ -1.23
SMAD4-212ENST00000591126 GOPCQ9HD26 462 aa7.37□□□□□ -1.23
SMAD4-212ENST00000591126 ECHDC1Q9NTX5 307 aa7.37□□□□□ -1.23
SMAD4-212ENST00000591126 NARFQ9UHQ1 456 aa7.37□□□□□ -1.23
SMAD4-212ENST00000591126 IL13P35225 146 aa7.37□□□□□ -1.23
SMAD4-212ENST00000591126 SLFN5Q08AF3 891 aa7.37□□□□□ -1.23
SMAD4-212ENST00000591126 USP37Q86T82 979 aa7.37□□□□□ -1.23
SMAD4-212ENST00000591126 CCDC150Q8NCX0 1101 aa7.37□□□□□ -1.23
SMAD4-212ENST00000591126 HMG20BQ9P0W2 317 aa7.37□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms